FFCP PHASE1:Hg19::chr12:6773757..6773767,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:6773757..6773767,+ | |||
|coexpression_cluster_id=C1019 | |||
|description=CAGE_peak_at_chr12:6773757..6773767,+ | |description=CAGE_peak_at_chr12:6773757..6773767,+ | ||
|id=chr12:6773757..6773767,+ | |id=chr12:6773757..6773767,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.19e-13!42;CL:0000860!6.50e-12!45;CL:0000839!1.43e-10!70;CL:0000557!3.23e-10!71;CL:0000763!1.39e-09!112;CL:0000049!1.39e-09!112;CL:0000037!3.14e-09!172;CL:0000566!3.14e-09!172;CL:0000738!3.77e-09!140;CL:0000766!4.99e-09!76;CL:0002032!1.86e-08!165;CL:0000837!1.86e-08!165;CL:0002031!4.56e-08!124;CL:0000988!7.54e-08!182;CL:0002009!1.03e-07!65;CL:0002194!1.32e-07!63;CL:0000576!1.32e-07!63;CL:0000040!1.32e-07!63;CL:0000559!1.32e-07!63 | |ontology_enrichment_celltype=CL:0002057!2.19e-13!42;CL:0000860!6.50e-12!45;CL:0000839!1.43e-10!70;CL:0000557!3.23e-10!71;CL:0000763!1.39e-09!112;CL:0000049!1.39e-09!112;CL:0000037!3.14e-09!172;CL:0000566!3.14e-09!172;CL:0000738!3.77e-09!140;CL:0000766!4.99e-09!76;CL:0002032!1.86e-08!165;CL:0000837!1.86e-08!165;CL:0002031!4.56e-08!124;CL:0000988!7.54e-08!182;CL:0002009!1.03e-07!65;CL:0002194!1.32e-07!63;CL:0000576!1.32e-07!63;CL:0000040!1.32e-07!63;CL:0000559!1.32e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000875;9.96e-07;3!CL:0002396;9.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,2.82e-10,66;CL:0000473,3.89e-10,48;CL:0000234,3.89e-10,48;CL:0000557,4.68e-10,67;CL:0000860,1.56e-09,42;CL:0002057,1.56e-09,42;CL:0000766,5.31e-09,72;CL:0000763,3.59e-08,108;CL:0000049,3.59e-08,108;CL:0002393,7.95e-08,9;CL:0002397,7.95e-08,9;CL:0000738,2.30e-07,136;CL:0002031,2.56e-07,120;CL:0002194,4.12e-07,59;CL:0000576,4.12e-07,59;CL:0000040,4.12e-07,59;CL:0000559,4.12e-07,59;CL:0002032,6.80e-07,161;CL:0000837,6.80e-07,161;CL:0002009,9.91e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;2.04e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.12e-09!80;UBERON:0001474!4.83e-08!86;UBERON:0001737!1.34e-07!9;UBERON:0004765!1.58e-07!101;UBERON:0001434!1.58e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.52e-09,76;UBERON:0004765,3.81e-08,90;UBERON:0001474,5.99e-08,82;UBERON:0002405,5.79e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,2.41077811209591,2.92124036154949,0.487932798790507,0,0,0,0,0,0,0,0,0,0.786728553697808,0,1.85779347979291,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,1.45398238779565,3.02300754951048,1.94067248950253,0.232429036905685,0.822335776043652,1.23882548358041,0,0,0.47296445977717,0,0,0,1.50593871634084,1.63743690034707,1.57306439111559,0.306083892370903,0.320929027076094,0.639337125799041,1.31940520074686,1.19678194572979,0.852449501065388,0,0,0,0,0.521482918420201,0.65156653411535,0,0,0.316462387440884,3.80259515361495,4.03948169933583,3.56419697364239,1.23561494261145,2.85336096398862,1.6072558669708,1.42506371870624,4.77400025277816,4.74926799788048,0,0.546138611262131,0,0,1.20118796110804,0.574752439954483,0.661044872784862,0,0,0,0.382273228125229,1.32171328579026,1.68152568894461,0.790152254325231,0,0,0,3.00935691703221,1.62961133316795,1.89379122293893,5.84480185223734,2.56244050835899,5.00830042707223,2.87994062958707,2.70803863765016,1.5370958367081,1.43065282315866,1.97325485524411,0.276350017785848,1.73881851441031,2.22429844743091,4.0131124213457,1.04535523804977,1.35971211237079,1.53288197440768,0.34362744548263,2.78321661221453,0.318565414324097,1.30216690771284,0,2.10805166708882,1.91979916731628,0,1.18388626022008,0,0,0,0,0,0,1.15076305659177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.45650098894541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0.257640540045629,0,1.5189869901714,0,0,0,6.7891343863901,0,0,0,0,0,0,0,0,0,0,1.51392510525377,0.36497735907583,0,0,0,0,0,0.828147600278907,0.674338760312407,0.723033089650446,0.882351781859152,0.435758888184812,0.949082476444386,0.404493924480493,1.76599318612811,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,2.57351715447788,0,0,0,0,0,0,0,3.014190529352,2.81780866165972,0,0.925971025153221,0.951270761172991,0,0,0,0,0,0.93733833986777,1.84780341018745,1.41775097242386,0,0,0,0,2.20121085033065,1.86595303986695,1.72943944100354,2.39860623510122,1.0159663086747,0,0,0,0,0.600686115687835,2.28661146104463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,3.51579964002488,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,1.87173775377726,0.713715955188647,1.41932173530541,1.28855556491985,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,4.29693525206575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,0.784306353074702,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,1.91419068741876,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14729081763241,1.17898849215745,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0.766021480529467,0,0.973865820823666,0,0,0,0,1.35433422241283,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0.33307196799782,0,0,0,0,0,0,1.90995587790152,2.37571744666111,0,3.97659059106519,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,3.54296554325536,0,10.6807215421958,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,2.23300811812344,1.4655614944298,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80336230967832,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15706720828373,0.136203406111576,0.643012593860077,0.687697182986169,1.24632101408756,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,1.22538230705385,0.655745261419609,0,2.65820453990096,2.44052529803926,0,5.16068276121064,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,2.66943366478961,0,0,0,0,0,2.69881867298163,0,1.24411862352257,0,0.521745061811734,0,2.28483127301277,0,0,0.107410557042488,3.71227007902795,1.59238355479446,0,2.40376993627955,2.69399591012735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36402216187572,1.86010776438708,1.96278473107013,0,0,0,0,0,0,0,0,0.279759015438889,0,0.127894371303652,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,8.5017945795351,0,0,0,0,0.161475645631851,7.13847101295772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.24862478891078,0,0,0,0,0,0,0,5.89272019466115,0,4.85572483389305,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.93061915699296,0,0,0,0,1.94228651156368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76677620403451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,7.46252495512901,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr12:6773757..6773767,+ | |short_description=p@chr12:6773757..6773767,+ | ||
}} | }} |
Latest revision as of 11:36, 24 July 2015
Short description: | p@chr12:6773757..6773767, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6773757..6773767, + |
Coexpression cluster: | C1019_occipital_medial_amygdala_caudate_hippocampus_cerebellum_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 2.82e-10 | 66 |
defensive cell | 3.89e-10 | 48 |
phagocyte | 3.89e-10 | 48 |
granulocyte monocyte progenitor cell | 4.68e-10 | 67 |
classical monocyte | 1.56e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.56e-09 | 42 |
myeloid leukocyte | 5.31e-09 | 72 |
myeloid cell | 3.59e-08 | 108 |
common myeloid progenitor | 3.59e-08 | 108 |
intermediate monocyte | 7.95e-08 | 9 |
CD14-positive, CD16-positive monocyte | 7.95e-08 | 9 |
leukocyte | 2.30e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 2.56e-07 | 120 |
monopoietic cell | 4.12e-07 | 59 |
monocyte | 4.12e-07 | 59 |
monoblast | 4.12e-07 | 59 |
promonocyte | 4.12e-07 | 59 |
hematopoietic oligopotent progenitor cell | 6.80e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.80e-07 | 161 |
macrophage dendritic cell progenitor | 9.91e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.52e-09 | 76 |
skeletal element | 3.81e-08 | 90 |
bone element | 5.99e-08 | 82 |
immune system | 5.79e-07 | 93 |