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FFCP PHASE1:Mm9::chr3:121948394..121948468,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14630
|EntrezGene=14630
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=O09172
|UniProt=O09172
|association_with_transcript=-6bp_to_ENSMUST00000029769_5end
|association_with_transcript=-6bp_to_ENSMUST00000029769_5end
|cluster_id=chr3:121948394..121948468,+
|description=CAGE_peak_3_at_Gclm_5end
|description=CAGE_peak_3_at_Gclm_5end
|id=chr3:121948394..121948468,+
|id=chr3:121948394..121948468,+
|ontology_enrichment_celltype=CL:0000117!6.88e-13!23;CL:0000337!6.88e-13!23;CL:0002319!3.20e-11!43;CL:0000221!3.52e-11!44;CL:0000133!3.52e-11!44;CL:0000540!7.86e-11!33;CL:0000047!7.86e-11!33;CL:0000031!7.86e-11!33;CL:0000404!7.86e-11!33;CL:0000055!7.71e-09!50;CL:0000393!1.96e-08!39;CL:0000211!1.96e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,6.74e-13,23;CL:0000337,6.74e-13,23;CL:0002319,3.14e-11,43;CL:0000221,3.45e-11,44;CL:0000133,3.45e-11,44;CL:0000540,7.72e-11,33;CL:0000047,7.72e-11,33;CL:0000031,7.72e-11,33;CL:0000404,7.72e-11,33;CL:0000393,1.94e-08,39;CL:0000211,1.94e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.06e-26!73;UBERON:0005743!3.06e-26!73;UBERON:0000073!2.91e-24!75;UBERON:0001016!2.91e-24!75;UBERON:0001049!7.83e-23!52;UBERON:0005068!7.83e-23!52;UBERON:0006241!7.83e-23!52;UBERON:0007135!7.83e-23!52;UBERON:0000955!1.52e-22!50;UBERON:0006238!1.52e-22!50;UBERON:0002616!4.02e-22!49;UBERON:0004121!2.20e-21!102;UBERON:0000924!2.20e-21!102;UBERON:0006601!2.20e-21!102;UBERON:0002346!4.08e-20!71;UBERON:0003075!4.08e-20!71;UBERON:0007284!4.08e-20!71;UBERON:0000033!4.84e-20!63;UBERON:0007811!5.48e-18!86;UBERON:0000153!1.49e-17!94;UBERON:0002020!3.11e-17!34;UBERON:0003080!1.61e-16!40;UBERON:0002780!6.06e-16!39;UBERON:0001890!6.06e-16!39;UBERON:0006240!6.06e-16!39;UBERON:0003056!1.58e-15!49;UBERON:0002791!3.49e-15!29;UBERON:0003528!3.49e-15!29;UBERON:0001893!3.49e-15!29;UBERON:0000956!1.46e-10!21;UBERON:0001869!1.46e-10!21;UBERON:0000203!1.46e-10!21;UBERON:0002619!9.84e-09!17;UBERON:0000025!1.32e-08!114;UBERON:0004111!1.45e-07!122;UBERON:0000475!5.01e-07!200;UBERON:0003076!5.35e-07!12;UBERON:0003057!5.35e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.92e-26,73;UBERON:0000073,1.99e-24,54;UBERON:0001016,2.79e-24,75;UBERON:0001049,7.52e-23,52;UBERON:0005068,7.52e-23,52;UBERON:0006241,7.52e-23,52;UBERON:0007135,7.52e-23,52;UBERON:0004121,7.72e-23,95;UBERON:0000924,7.72e-23,95;UBERON:0006601,7.72e-23,95;UBERON:0002346,2.91e-22,64;UBERON:0003075,2.91e-22,64;UBERON:0007284,2.91e-22,64;UBERON:0010371,7.08e-22,73;UBERON:0000955,2.12e-20,47;UBERON:0006238,2.12e-20,47;UBERON:0002616,5.48e-20,46;UBERON:0002020,3.02e-17,34;UBERON:0003080,1.57e-16,40;UBERON:0010314,2.73e-16,92;UBERON:0002780,5.90e-16,39;UBERON:0001890,5.90e-16,39;UBERON:0006240,5.90e-16,39;UBERON:0003056,1.54e-15,49;UBERON:0003528,3.40e-15,29;UBERON:0002791,3.40e-15,29;UBERON:0001893,3.40e-15,29;UBERON:0000956,1.44e-10,21;UBERON:0001869,1.44e-10,21;UBERON:0000203,1.44e-10,21;UBERON:0002619,9.70e-09,17;UBERON:0000025,1.21e-08,114;UBERON:0004111,1.34e-07,122;UBERON:0003076,5.30e-07,12;UBERON:0003057,5.30e-07,12
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4937519160848,36.0763480757882,5.38259565758324,6.12196414691261,5.05573089694524,5.55387240954244,5.23763989021412,6.45464812551647,8.98410255423256,14.6803082195995,23.1920755992966,23.9064905194028,1.89606672376907,3.85177909051312,5.44368072973584,6.49604114888975,5.90788095702689,5.96044064343795,5.52899067791857,6.64602872285597,3.33189284828887,8.99240318528998,6.45287584875779,6.52967800956341,6.44619338990207,6.07759891344159,2.0405734525369,2.88581739386284,1.61484941897056,2.01461539636894,3.67060228661162,1.68914227906064,3.29672923681077,1.92931541171159,2.00628841614145,9.60078132449013,12.4287813856938,10.8850147553485,15.9823459579629,9.59115527678899,10.5755145634558,10.1253375034771,10.8077088773813,6.79713613476307,12.4262474820437,5.18936737920883,7.98049746802062,3.58540572083682,3.64660075602441,6.70762120409543,6.25067928730048,3.33370091702423,3.09052585858341,4.49286893428541,5.30664144703975,4.30914809813408,5.84741658296836,4.86935838843389,5.18603734479441,5.22662767496081,6.19181798667996,5.67833197129792,4.82273051159263,4.53294490883637,3.67997300335993,4.11443102862498,2.48466128623072,4.29185141905178,3.63366041580821,5.17601592284318,4.23073039458383,3.84148743032822,3.15683653725411,4.20992752922171,5.61142271657738,4.62676570684279,6.79680928391388,3.6830793885272,4.33823155320705,5.20847849649082,7.49431733813838,5.84829021113521,7.52048689169044,5.35607329792761,3.97064554415128,5.33296021926969
|phase1_expression=4.48416771893423,0.697950815278722,0,0.60492842261366,0,0.33575854382378,0.467225281191051,5.03580961422147,1.267098499365,0.936258105287974,2.39705155515707,2.23362045186942,4.28001824828014,5.59490575481583,1.66554880907831,1.61980213911861,1.39912375625629,2.20823515750766,2.60517423850904,1.69755860719212,10.8855411393369,4.56738375524072,1.04479915655574,0.47997726838022,2.2940928106717,0,0.430761996159075,0.215471232685889,0.760093677825496,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0.577703239502549,0.498703936075477,0.408338712524738,2.92972141515835,2.3440060335714,1.0470474879476,4.70585190424811,4.78131839470912,3.88408282424923,2.51793635951155,2.53442328048786,3.30384153891027,13.3006528539167,7.41285531693518,8.34807494390993,8.1660557611199,5.87942970826523,7.18762821824858,1.51004345451963,5.80289713609076,6.04968838456435,3.34437266846731,7.44986943840768,3.09403255366465,12.7459370341547,9.52183762689659,12.6766280701236,3.04960078862219,4.4464739805557,7.19919773825119,4.94433181283487,2.1314403448383,5.39280198933128,5.76327457982332,10.7837196800817,11.6105106965254,10.3059231062177,9.14083150092171,5.74258206474195,10.9016811301309,11.1180746381154,16.5459381589804,30.8324466798288,20.8130361078856,17.2039317246993,10.9465618816061,9.60620257825301,15.6274011167028,19.2636269310953,14.069065250792,15.279824777681,13.8475435172624,10.1083893367363,14.3527573285481,1.4387976733305,1.28471652181535,2.02905142091174,3.44169550792555,0,1.61910957491345,1.29955283489534,0.896053774194671,2.52799956237153,4.26075806445144,3.11743205523443,3.18005617059306,4.92951969218382,7.69958864485907,0,21.3320010945999,2.81438353314578,1.01343946190039,2.52762222507392,3.4255163915718,3.10725460376606,4.00793775475027,4.3371331691534,4.26251669636998,4.61230994512117,2.26083960828934,5.64425794251383,3.39299796590124,3.46072954828123,3.32578520915797,0.884610551949874,4.36770494858005,3.3126227769059,3.39412677194655,0,12.8823550685081,17.5935233723302,0.510914110417183,3.35482348616577,1.79970819298022,2.66847476853436,13.481157546434,14.1825186873774,20.8586224507355,10.6032835317289,11.5071955798649,16.4152555202052,10.2211995732687,11.1004906596845,3.73220911830279,6.06534620240819,4.62972082950243,4.68433594665733,5.74755261083682,3.96136685571768,4.82255417074288,7.96027040070536,4.09963904911519,6.09061209638237,4.13925393182425,4.95806383745537,3.21480336285293,6.68614271823006,5.47989331068937,4.72680323683516,4.52727816478817,5.14455341019859,5.57295947091781,3.51106593656617,1.28673953557358,3.6941254921427,5.59239585845855,2.81431271977315,4.14142741360334,3.78791576936336,3.14822770795846,4.31947916084659,3.95307706075693,5.09719462659276,6.18856314545998,5.26591519723137,4.26835406605648,4.78305976320549,3.94739966048397,2.63460138349261,4.42881181909227,6.9395683026162,16.9792610425819,0.991256348951394,0.793351699990633,2.55945900642281,2.32236671860439,5.28356591420583,3.42861991859682,3.33567065767305,2.85338439168839,0.949058123089023,3.45867804920423,3.01602250560323,3.38226002469956,1.75467678407208,0.898819408654221,2.37751854862164,1.1948476395262,5.69003702859245,5.1411830674378,6.76246414038483,3.66572390121566,5.81857461502877,8.13575510727695,7.52514791778662,4.57591458736767,4.55296310739987,3.70191491765402,2.07516838961004,3.17005700860579,1.57247196090562,1.79889689907883,1.21716072833102,0.482354319504834,1.2731292589071,2.01387296215567,1.62135226775035,2.19649130550465,1.43768206527355,2.97712758134803,3.43241440426017,1.26289438973556,0,2.8946611281802,4.80358294433172,3.41084541186873,4.88894929326078,6.62005834523234,8.21415869009757,7.03526281255626,7.85544014923845,8.39074685788535,9.14283835815908,9.7444463445461,9.56728611944923,6.882259218061,6.38934432903814,4.91806799177139,0,2.71952841909355,1.47529281905711,3.86311444826625,15.0917554588524,17.4645413022383,4.26230857979356,2.7771801992481,5.04813151066011,6.24701990874622,7.10897212518236,2.86762557543062,3.7875774594007,5.37845408498782,4.85772842009873,4.67609372658099,4.34816555741176,8.9969968598106,3.12268187458191,12.9987890677096,16.6144698540648,4.61916344323099,0,3.39892890616974,4.83717691143602,3.58349651536206,2.65771703592696,4.30409207121498,3.6179961043551,3.27180356529755,4.27796854061666,3.47640433729398,1.05418608574999,2.06271086496374,3.06395645178409,4.68158844481407,5.43306471887569,7.28745919107414,4.25616560741457,7.13475270408282,6.58196082408484,9.74287837166718,3.75474732901937,4.44847348814022,4.6310963591542,4.61681508236144,9.36493674836252,8.62474826472629,7.28171298419132,5.41664969158702,0.874442509889552,13.5360470467672,2.73393409276564,5.15967169908056,2.77791791054568,1.69531611304222,1.91371918809435,0.915112692826091,3.0596117398894,2.6590775941495,3.86959926652387,0.954670618015114,6.48488786841327,4.26970880966382,3.45617090629764,5.22720740036172,3.71216358368502,5.25970950900801,4.21532624199213,1.30877970992015,1.03691978633434,4.34937519160848,36.0763480757882,5.38259565758324,6.12196414691261,5.05573089694524,5.55387240954244,5.23763989021412,6.45464812551647,8.98410255423256,14.6803082195995,23.1920755992966,23.9064905194028,1.89606672376907,3.85177909051312,5.44368072973584,6.49604114888975,5.90788095702689,5.96044064343795,5.52899067791857,6.64602872285597,3.33189284828887,8.99240318528998,6.45287584875779,6.52967800956341,6.44619338990207,6.07759891344159,2.0405734525369,2.88581739386284,1.61484941897056,2.01461539636894,3.67060228661162,1.68914227906064,3.29672923681077,1.92931541171159,2.00628841614145,9.60078132449013,12.4287813856938,10.8850147553485,15.9823459579629,9.59115527678899,10.5755145634558,10.1253375034771,10.8077088773813,6.79713613476307,12.4262474820437,5.18936737920883,7.98049746802062,3.58540572083682,3.64660075602441,6.70762120409543,6.25067928730048,3.33370091702423,3.09052585858341,4.49286893428541,5.30664144703975,4.30914809813408,5.84741658296836,4.86935838843389,5.18603734479441,5.22662767496081,6.19181798667996,5.67833197129792,4.82273051159263,4.53294490883637,3.67997300335993,4.11443102862498,2.48466128623072,4.29185141905178,3.63366041580821,5.17601592284318,4.23073039458383,3.84148743032822,3.15683653725411,4.20992752922171,5.61142271657738,4.62676570684279,6.79680928391388,3.6830793885272,4.33823155320705,5.20847849649082,7.49431733813838,5.84829021113521,7.52048689169044,5.35607329792761,3.97064554415128,5.33296021926969
|short_description=p3@Gclm
|short_description=p3@Gclm
}}
}}

Latest revision as of 13:06, 1 October 2015

Short description:p3@Gclm
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gclm_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: -6bp_to_ENSMUST00000029769_5end
EntrezGene:Gclm
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gclm

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.59
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.52
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.41
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.45
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C312.75
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.61
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.11
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.35
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C15.64
adrenal gland, neonate N25.CNhs11223.1377-27I33.39
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.88
cerebellum, neonate N30.CNhs11135.1395-42I217.59
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.67
corpora quadrigemina, adult.CNhs10501.16-22A413.48
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F120.86
cortex, adult.CNhs10473.12-14D510.60
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F216.42
diencephalon, neonate N30.CNhs11201.1388-42B210.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.73
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C64.68
eyeball, embryo E14.CNhs10521.399-16E25.75
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C67.96
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G86.09
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E24.96
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E26.69
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E95.59
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I94.14
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G35.10
heart, neonate N00.CNhs11213.639-21E36.19
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G14.78
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D24.43
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G116.98
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D85.28
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I95.69
kidney, embryo E15.CNhs10997.434-16F85.14
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C75.82
kidney, neonate N00.CNhs11214.646-21G78.14
kidney, neonate N10.CNhs11206.758-6D57.53
kidney, neonate N20.CNhs11113.832-19I14.58
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H13.70
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C56.62
lung, embryo E16.CNhs10998.458-17B68.21
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I67.86
lung, neonate N00.CNhs11224.640-42C68.39
lung, neonate N06.CNhs11212.683-20E59.14
lung, neonate N07.CNhs11111.715-19A39.74
lung, neonate N10.CNhs11219.750-23E69.57
lung, neonate N20.CNhs11109.822-18A46.88
lung, neonate N25.CNhs11119.1359-25C76.39
lung, neonate N30.CNhs11133.1394-42H24.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C215.09
medulla oblongata, neonate N30.CNhs11200.1396-42A317.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H713.00
ovary, neonate N00.CNhs11217.1299-22I416.61
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A57.29
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F67.13
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F84.63
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G49.36
skin, neonate N03.CNhs11215.662-22H38.62
skin, neonate N06.CNhs11097.693-20I57.28
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C913.54
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.87
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E36.48
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D43.46
stomach, embryo E17.CNhs11006.1035-18D55.23
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A94.22
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G536.08
testis, embryo E13.CNhs11031.389-23F55.38
testis, embryo E15.CNhs11034.443-27C56.12
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I55.55
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B76.45
testis, neonate N07.CNhs11222.726-26I48.98
testis, neonate N10.CNhs11204.763-44D914.68
testis, neonate N20.CNhs11110.839-18H323.19
testis, neonate N30.CNhs11130.1391-42E223.91
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I25.44
thymus, embryo E16.CNhs11002.456-26C56.50
thymus, embryo E17.CNhs10581.478-18C15.91
thymus, embryo E18.CNhs10595.1273-19G45.96
thymus, neonate N02.CNhs11181.1541-43F85.53
thymus, neonate N03.CNhs11137.2104-43C76.65
thymus, neonate N06.CNhs11197.681-26C43.33
thymus, neonate N07.CNhs11211.713-19D38.99
thymus, neonate N10.CNhs11194.748-24E46.45
thymus, neonate N20.CNhs11186.820-7A26.53
thymus, neonate N25.CNhs11125.1362-25G76.45
thymus, neonate N30.CNhs11132.1393-42G26.08
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I85.19
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B16.71
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.18
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B45.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.74e-1323
neuroblast (sensu Vertebrata)6.74e-1323
neural cell3.14e-1143
ectodermal cell3.45e-1144
neurectodermal cell3.45e-1144
neuron7.72e-1133
neuronal stem cell7.72e-1133
neuroblast7.72e-1133
electrically signaling cell7.72e-1133
electrically responsive cell1.94e-0839
electrically active cell1.94e-0839

Uber anatomy
Ontology termp-valuen
central nervous system2.92e-2673
regional part of nervous system1.99e-2454
nervous system2.79e-2475
neural tube7.52e-2352
neural rod7.52e-2352
future spinal cord7.52e-2352
neural keel7.52e-2352
ectoderm-derived structure7.72e-2395
ectoderm7.72e-2395
presumptive ectoderm7.72e-2395
neurectoderm2.91e-2264
neural plate2.91e-2264
presumptive neural plate2.91e-2264
ecto-epithelium7.08e-2273
brain2.12e-2047
future brain2.12e-2047
regional part of brain5.48e-2046
gray matter3.02e-1734
anterior neural tube1.57e-1640
structure with developmental contribution from neural crest2.73e-1692
regional part of forebrain5.90e-1639
forebrain5.90e-1639
future forebrain5.90e-1639
pre-chordal neural plate1.54e-1549
brain grey matter3.40e-1529
regional part of telencephalon3.40e-1529
telencephalon3.40e-1529
cerebral cortex1.44e-1021
cerebral hemisphere1.44e-1021
pallium1.44e-1021
regional part of cerebral cortex9.70e-0917
tube1.21e-08114
anatomical conduit1.34e-07122
posterior neural tube5.30e-0712
chordal neural plate5.30e-0712
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