FFCP PHASE1:Mm9::chr10:77355801..77355834,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75188 | |EntrezGene=75188 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-330bp_to_NR_015547,uc007fwh.2_5end | |association_with_transcript=-330bp_to_NR_015547,uc007fwh.2_5end | ||
|cluster_id=chr10:77355801..77355834,+ | |||
|description=CAGE_peak_3_at_1700009J07Rik_5end | |description=CAGE_peak_3_at_1700009J07Rik_5end | ||
|id=chr10:77355801..77355834,+ | |id=chr10:77355801..77355834,+ | ||
|ontology_enrichment_celltype=CL:0000553!3.30e-14!6;CL:0000556!3.30e-14!6;CL:0000050!3.45e-09!9;CL:0002027!3.87e-08!3;CL:0002006!3.87e-08!3;CL:0002024!3.87e-08!3;CL:0000414!2.30e-07!11 | |ontology_enrichment_celltype=CL:0000553!3.30e-14!6;CL:0000556!3.30e-14!6;CL:0000050!3.45e-09!9;CL:0002027!3.87e-08!3;CL:0002006!3.87e-08!3;CL:0002024!3.87e-08!3;CL:0000414!2.30e-07!11 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003887!1.20e-07!10;UBERON:0002193!3.68e-07!48 | |ontology_enrichment_uberon=UBERON:0003887!1.20e-07!10;UBERON:0002193!3.68e-07!48 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.51e-31,14;UBERON:0003918,1.51e-31,14;UBERON:0011143,1.51e-31,14;UBERON:0005095,1.51e-31,14;UBERON:0007687,1.51e-31,14;UBERON:0006554,1.01e-24,18;UBERON:0001008,1.82e-23,19;UBERON:0000489,2.63e-21,21;UBERON:0003103,9.33e-11,43;UBERON:0005172,1.64e-09,49;UBERON:0005173,1.64e-09,49;UBERON:0002417,1.64e-09,49;UBERON:0000916,1.64e-09,49;UBERON:0003104,9.51e-08,61;UBERON:0009142,9.51e-08,61;UBERON:0009569,3.36e-07,66;UBERON:0001301,4.77e-07,3;UBERON:0006555,4.77e-07,3;UBERON:0005103,4.77e-07,3;UBERON:0000083,4.77e-07,3;UBERON:0009201,4.77e-07,3;UBERON:0004819,4.77e-07,3;UBERON:0006553,4.77e-07,3;UBERON:0003074,4.77e-07,3;UBERON:0003060,4.77e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.666219523631325,0.809901069559304,0.699561878128147,0.473193248037357,0.548457734422955,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,0,0.746441823660558,2.27450482590307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59269802209455,4.57591458736767,4.55296310739987,1.35736880313981,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0.410082683163076,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.666219523631325,0.809901069559304,0.699561878128147,0.473193248037357,0.548457734422955,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,0,0.746441823660558,2.27450482590307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59269802209455,4.57591458736767,4.55296310739987,1.35736880313981,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0.410082683163076,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@1700009J07Rik | |short_description=p3@1700009J07Rik | ||
}} | }} |
Latest revision as of 08:19, 26 September 2015
Short description: | p3@1700009J07Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_1700009J07Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | -330bp_to_NR_015547, uc007fwh.2_5end |
EntrezGene: | 1700009J07Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.51e-31 | 14 |
kidney mesenchyme | 1.51e-31 | 14 |
upper urinary tract | 1.51e-31 | 14 |
kidney rudiment | 1.51e-31 | 14 |
kidney field | 1.51e-31 | 14 |
urinary system structure | 1.01e-24 | 18 |
renal system | 1.82e-23 | 19 |
cavitated compound organ | 2.63e-21 | 21 |
compound organ | 9.33e-11 | 43 |
abdomen element | 1.64e-09 | 49 |
abdominal segment element | 1.64e-09 | 49 |
abdominal segment of trunk | 1.64e-09 | 49 |
abdomen | 1.64e-09 | 49 |
mesenchyme | 9.51e-08 | 61 |
entire embryonic mesenchyme | 9.51e-08 | 61 |
subdivision of trunk | 3.36e-07 | 66 |
epididymis | 4.77e-07 | 3 |
excretory tube | 4.77e-07 | 3 |
mesonephric epithelium | 4.77e-07 | 3 |
mesonephric tubule | 4.77e-07 | 3 |
nephric duct | 4.77e-07 | 3 |
kidney epithelium | 4.77e-07 | 3 |
renal duct | 4.77e-07 | 3 |
mesonephric duct | 4.77e-07 | 3 |
pronephric duct | 4.77e-07 | 3 |