FFCP PHASE1:Mm9::chr1:58782860..58782907,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=92 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:58782860..58782907,+ | |||
|description=CAGE_peak_at_chr1:58782860..58782907,+ | |description=CAGE_peak_at_chr1:58782860..58782907,+ | ||
|id=chr1:58782860..58782907,+ | |id=chr1:58782860..58782907,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.48e-08,7;CL:0000192,3.46e-08,3;CL:0000359,3.46e-08,3;CL:0002539,3.46e-08,3;CL:0000514,3.46e-08,3;CL:0000215,6.61e-08,3;CL:0000068,4.46e-07,3;CL:0002202,4.46e-07,3;CL:0000069,4.46e-07,3;CL:0002632,4.46e-07,3;CL:0002368,4.46e-07,3;CL:0000307,4.46e-07,3;CL:0000377,4.46e-07,3;CL:0000680,5.21e-07,6;CL:0000187,5.21e-07,6;CL:0000056,5.21e-07,6;CL:0000893,8.49e-07,6;CL:0002489,8.49e-07,6;CL:0000898,8.49e-07,6;CL:0000809,8.49e-07,6;CL:0000810,8.49e-07,6;CL:0000895,8.49e-07,6;CL:0000808,8.49e-07,6;CL:0000894,8.49e-07,6;CL:0000806,8.49e-07,6;CL:0000807,8.49e-07,6;CL:0000805,8.49e-07,6;CL:0002425,8.49e-07,6;CL:0002436,8.49e-07,6;CL:0002427,8.49e-07,6;CL:0002428,8.49e-07,6;CL:0002429,8.49e-07,6;CL:0002433,8.49e-07,6;CL:0002431,8.49e-07,6;CL:0002432,8.49e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!7.90e-09!27;UBERON:0002193!6.21e-08!48;UBERON:0004177!1.24e-07!29;UBERON:0003408!2.73e-07!24;UBERON:0001004!2.82e-07!42;UBERON:0006562!5.12e-07!24;UBERON:0001557!5.12e-07!24;UBERON:0001042!5.12e-07!24;UBERON:0008814!5.12e-07!24;UBERON:0009145!5.12e-07!24;UBERON:0003104!5.37e-07!131;UBERON:0009142!5.37e-07!131;UBERON:0000065!6.99e-07!41;UBERON:0002370!7.58e-07!23;UBERON:0000974!7.58e-07!23;UBERON:0004807!7.58e-07!23;UBERON:0005058!7.58e-07!23;UBERON:0003351!7.58e-07!23;UBERON:0009113!7.58e-07!23;UBERON:0003295!7.58e-07!23;UBERON:0009722!7.58e-07!23;UBERON:0005562!7.58e-07!23;UBERON:0007690!7.58e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.46e-08,3;UBERON:0004237,3.46e-08,3;UBERON:0004695,3.46e-08,3;UBERON:0002111,3.46e-08,3;UBERON:0004178,3.46e-08,3;UBERON:0000072,7.23e-08,27;UBERON:0000055,8.19e-08,5;UBERON:0007500,8.19e-08,5;UBERON:0001981,8.19e-08,5;UBERON:0002049,8.19e-08,5;UBERON:0007798,8.19e-08,5;UBERON:0004537,8.19e-08,5;UBERON:0006965,8.19e-08,5;UBERON:0002193,1.57e-07,48;UBERON:0002405,1.57e-07,48;UBERON:0003126,4.46e-07,3;UBERON:0001005,4.46e-07,3;UBERON:0007196,4.46e-07,3;UBERON:0001558,4.46e-07,3 | |||
|phase1_expression=0,1.39590163055744,1.81999695755814,0,0,0.33575854382378,0.233612640595526,0.258246646883153,6.47628121897667,3.5109678948299,3.5955773327356,3.58974715479014,0,0.0874204024189974,0,0,0,0.315462165358238,0,0,0.425216450755349,0,0,1.59992422793407,0.91763712426868,1.14846392823004,0.430761996159075,0.215471232685889,0,0,1.33038306393183,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,4.90997590104751,3.64956952390252,4.77221555620372,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0.336093799142464,11.5766746216176,0.286533439938757,0,0,0,0,0.338844532069132,0,0.449949858640699,2.96659908770092,2.1314403448383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,42.1037634932503,7.17929821014462,1.15945795480671,0,1.3599426674155,0,0,0,0,2.04516387093669,2.33807404142582,0.70667914902068,0,1.28326477414318,0,0,2.38140145112336,1.26679932737549,1.51657333504435,0.22836775943812,8.80388804400384,0.445326417194474,0,0,0,0.150722640552623,0,0.125666591329675,0.741584903203122,0.144599356919912,0,0.323533699894818,0,0.484875253135222,0,0,0,0,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0,0,0,0.30140963567143,0,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610953983535943,0.387904974335251,0.98190147846446,0.632365371242573,0.442830443938806,3.1399745568275,2.09775178667061,0,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0,0,0.327726629431476,0.345369963731791,0.289298117163023,10.5553898757491,10.3342079925555,0.491764273019036,0.551873492609465,0,0,0.163934945376675,0,0,0,0,0.238968797952552,0.222798674082394,0,0.809621403349789,1.46127928955656,1.97643888973262,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,6.33613611772018,1.90648863777438,0,0.16488625294148,0.161464426695906,0.241251699712623,0.358117032009409,0.328281799490123,0.291480836629851,0,1.02522528478712,0,0,0.376736914009382,0.956859594047176,0.915112692826091,0.509935289981566,0.69975726161829,0.829199842826543,0.954670618015114,0,0,0,0.418176592028937,0.218362563746178,0.404593039154462,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.102710957164827,0.25984164595559,0.537080087002444,0,1.08175904567972,0.738447635872886,0.504832249740738,0.838274873204998,0.504130925684203,1.46186821109629,0.865906574762965,0.818138315270983,0.226730383615211,0,0.269141569828427,0,0.19318959403219,13.1377732815827,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.407412341537585,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,1.39590163055744,1.81999695755814,0,0,0.33575854382378,0.233612640595526,0.258246646883153,6.47628121897667,3.5109678948299,3.5955773327356,3.58974715479014,0,0.0874204024189974,0,0,0,0.315462165358238,0,0,0.425216450755349,0,0,1.59992422793407,0.91763712426868,1.14846392823004,0.430761996159075,0.215471232685889,0,0,1.33038306393183,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,4.90997590104751,3.64956952390252,4.77221555620372,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0.336093799142464,11.5766746216176,0.286533439938757,0,0,0,0,0.338844532069132,0,0.449949858640699,2.96659908770092,2.1314403448383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,42.1037634932503,7.17929821014462,1.15945795480671,0,1.3599426674155,0,0,0,0,2.04516387093669,2.33807404142582,0.70667914902068,0,1.28326477414318,0,0,2.38140145112336,1.26679932737549,1.51657333504435,0.22836775943812,8.80388804400384,0.445326417194474,0,0,0,0.150722640552623,0,0.125666591329675,0.741584903203122,0.144599356919912,0,0.323533699894818,0,0.484875253135222,0,0,0,0,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0,0,0,0.30140963567143,0,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610953983535943,0.387904974335251,0.98190147846446,0.632365371242573,0.442830443938806,3.1399745568275,2.09775178667061,0,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0,0,0.327726629431476,0.345369963731791,0.289298117163023,10.5553898757491,10.3342079925555,0.491764273019036,0.551873492609465,0,0,0.163934945376675,0,0,0,0,0.238968797952552,0.222798674082394,0,0.809621403349789,1.46127928955656,1.97643888973262,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,6.33613611772018,1.90648863777438,0,0.16488625294148,0.161464426695906,0.241251699712623,0.358117032009409,0.328281799490123,0.291480836629851,0,1.02522528478712,0,0,0.376736914009382,0.956859594047176,0.915112692826091,0.509935289981566,0.69975726161829,0.829199842826543,0.954670618015114,0,0,0,0.418176592028937,0.218362563746178,0.404593039154462,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.102710957164827,0.25984164595559,0.537080087002444,0,1.08175904567972,0.738447635872886,0.504832249740738,0.838274873204998,0.504130925684203,1.46186821109629,0.865906574762965,0.818138315270983,0.226730383615211,0,0.269141569828427,0,0.19318959403219,13.1377732815827,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.407412341537585,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr1:58782860..58782907,+ | |short_description=p@chr1:58782860..58782907,+ | ||
}} | }} |
Latest revision as of 19:16, 5 August 2015
Short description: | p@chr1:58782860..58782907, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:58782860..58782907, + |
Coexpression cluster: | MCL_coexpression_mm9:92 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 3.46e-08 | 3 |
blood vessel smooth muscle | 3.46e-08 | 3 |
arterial system smooth muscle | 3.46e-08 | 3 |
artery smooth muscle tissue | 3.46e-08 | 3 |
aorta smooth muscle tissue | 3.46e-08 | 3 |
segment of respiratory tract | 7.23e-08 | 27 |
vessel | 8.19e-08 | 5 |
epithelial tube open at both ends | 8.19e-08 | 5 |
blood vessel | 8.19e-08 | 5 |
vasculature | 8.19e-08 | 5 |
vascular system | 8.19e-08 | 5 |
blood vasculature | 8.19e-08 | 5 |
vascular cord | 8.19e-08 | 5 |
hemolymphoid system | 1.57e-07 | 48 |
immune system | 1.57e-07 | 48 |
trachea | 4.46e-07 | 3 |
respiratory airway | 4.46e-07 | 3 |
tracheobronchial tree | 4.46e-07 | 3 |
lower respiratory tract | 4.46e-07 | 3 |