FFCP PHASE1:Mm9::chr11:68834407..68834410,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=370 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:68834407..68834410,+ | |||
|description=CAGE_peak_at_chr11:68834407..68834410,+ | |description=CAGE_peak_at_chr11:68834407..68834410,+ | ||
|id=chr11:68834407..68834410,+ | |id=chr11:68834407..68834410,+ | ||
|ontology_enrichment_celltype=CL:0000548!3.45e-44!115;CL:0000004!3.45e-44!115;CL:0000255!3.45e-44!115;CL:0002371!2.73e-42!118;CL:0000144!1.74e-40!121;CL:0000012!1.74e-40!121;CL:0000723!7.57e-38!91;CL:0000048!7.57e-38!91;CL:0000034!3.49e-37!97;CL:0002321!2.50e-28!70;CL:0000220!2.50e-28!70;CL:0000055!5.94e-25!50;CL:0002319!1.76e-24!43;CL:0000221!1.41e-23!44;CL:0000133!1.41e-23!44;CL:0000540!1.30e-21!33;CL:0000047!1.30e-21!33;CL:0000031!1.30e-21!33;CL:0000404!1.30e-21!33;CL:0000393!6.68e-21!39;CL:0000211!6.68e-21!39;CL:0000219!9.29e-19!54;CL:0002320!1.33e-16!46;CL:0000134!1.33e-16!46;CL:0000117!5.81e-16!23;CL:0000337!5.81e-16!23;CL:0000063!1.59e-15!66;CL:0002031!1.77e-12!25;CL:0000988!1.23e-09!32;CL:0002032!1.23e-09!32;CL:0000037!1.23e-09!32;CL:0000566!1.23e-09!32;CL:0000837!1.23e-09!32;CL:0000414!8.51e-09!11;CL:0000839!1.11e-08!13;CL:0000107!9.01e-08!9;CL:0000763!2.81e-07!16;CL:0000738!6.04e-07!17;CL:0002087!6.04e-07!17 | |ontology_enrichment_celltype=CL:0000548!3.45e-44!115;CL:0000004!3.45e-44!115;CL:0000255!3.45e-44!115;CL:0002371!2.73e-42!118;CL:0000144!1.74e-40!121;CL:0000012!1.74e-40!121;CL:0000723!7.57e-38!91;CL:0000048!7.57e-38!91;CL:0000034!3.49e-37!97;CL:0002321!2.50e-28!70;CL:0000220!2.50e-28!70;CL:0000055!5.94e-25!50;CL:0002319!1.76e-24!43;CL:0000221!1.41e-23!44;CL:0000133!1.41e-23!44;CL:0000540!1.30e-21!33;CL:0000047!1.30e-21!33;CL:0000031!1.30e-21!33;CL:0000404!1.30e-21!33;CL:0000393!6.68e-21!39;CL:0000211!6.68e-21!39;CL:0000219!9.29e-19!54;CL:0002320!1.33e-16!46;CL:0000134!1.33e-16!46;CL:0000117!5.81e-16!23;CL:0000337!5.81e-16!23;CL:0000063!1.59e-15!66;CL:0002031!1.77e-12!25;CL:0000988!1.23e-09!32;CL:0002032!1.23e-09!32;CL:0000037!1.23e-09!32;CL:0000566!1.23e-09!32;CL:0000837!1.23e-09!32;CL:0000414!8.51e-09!11;CL:0000839!1.11e-08!13;CL:0000107!9.01e-08!9;CL:0000763!2.81e-07!16;CL:0000738!6.04e-07!17;CL:0002087!6.04e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.48e-34,91;CL:0000048,1.48e-34,91;CL:0000034,1.35e-32,97;CL:0002319,2.20e-27,43;CL:0000221,1.66e-26,44;CL:0000133,1.66e-26,44;CL:0002321,1.78e-26,70;CL:0000540,1.08e-25,33;CL:0000047,1.08e-25,33;CL:0000031,1.08e-25,33;CL:0000404,1.08e-25,33;CL:0000393,1.37e-25,39;CL:0000211,1.37e-25,39;CL:0000117,7.57e-18,23;CL:0000337,7.57e-18,23;CL:0000219,2.66e-13,54;CL:0002320,5.20e-12,46;CL:0000134,5.20e-12,46;CL:0002031,7.17e-11,25;CL:0000107,5.69e-10,9;CL:0000839,7.20e-10,13;CL:0000763,1.73e-07,16;CL:0000988,1.86e-07,32;CL:0002032,1.86e-07,32;CL:0000037,1.86e-07,32;CL:0000837,1.86e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.39e-20!73;UBERON:0005743!4.39e-20!73;UBERON:0000073!4.67e-19!75;UBERON:0001016!4.67e-19!75;UBERON:0002020!1.18e-16!34;UBERON:0002384!1.33e-16!46;UBERON:0002791!6.46e-14!29;UBERON:0003528!6.46e-14!29;UBERON:0001893!6.46e-14!29;UBERON:0004121!3.95e-12!102;UBERON:0000924!3.95e-12!102;UBERON:0006601!3.95e-12!102;UBERON:0000956!1.49e-11!21;UBERON:0001869!1.49e-11!21;UBERON:0000203!1.49e-11!21;UBERON:0002619!1.04e-10!17;UBERON:0002021!8.96e-10!10;UBERON:0000411!8.96e-10!10;UBERON:0001950!8.96e-10!10;UBERON:0001049!1.38e-09!52;UBERON:0005068!1.38e-09!52;UBERON:0006241!1.38e-09!52;UBERON:0007135!1.38e-09!52;UBERON:0002616!4.59e-09!49;UBERON:0002780!8.26e-09!39;UBERON:0001890!8.26e-09!39;UBERON:0006240!8.26e-09!39;UBERON:0000955!1.09e-08!50;UBERON:0006238!1.09e-08!50;UBERON:0003080!2.20e-08!40;UBERON:0002371!3.07e-08!16;UBERON:0002410!9.01e-08!9;UBERON:0002346!1.39e-07!71;UBERON:0003075!1.39e-07!71;UBERON:0007284!1.39e-07!71 | |ontology_enrichment_uberon=UBERON:0001017!4.39e-20!73;UBERON:0005743!4.39e-20!73;UBERON:0000073!4.67e-19!75;UBERON:0001016!4.67e-19!75;UBERON:0002020!1.18e-16!34;UBERON:0002384!1.33e-16!46;UBERON:0002791!6.46e-14!29;UBERON:0003528!6.46e-14!29;UBERON:0001893!6.46e-14!29;UBERON:0004121!3.95e-12!102;UBERON:0000924!3.95e-12!102;UBERON:0006601!3.95e-12!102;UBERON:0000956!1.49e-11!21;UBERON:0001869!1.49e-11!21;UBERON:0000203!1.49e-11!21;UBERON:0002619!1.04e-10!17;UBERON:0002021!8.96e-10!10;UBERON:0000411!8.96e-10!10;UBERON:0001950!8.96e-10!10;UBERON:0001049!1.38e-09!52;UBERON:0005068!1.38e-09!52;UBERON:0006241!1.38e-09!52;UBERON:0007135!1.38e-09!52;UBERON:0002616!4.59e-09!49;UBERON:0002780!8.26e-09!39;UBERON:0001890!8.26e-09!39;UBERON:0006240!8.26e-09!39;UBERON:0000955!1.09e-08!50;UBERON:0006238!1.09e-08!50;UBERON:0003080!2.20e-08!40;UBERON:0002371!3.07e-08!16;UBERON:0002410!9.01e-08!9;UBERON:0002346!1.39e-07!71;UBERON:0003075!1.39e-07!71;UBERON:0007284!1.39e-07!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.70e-25,73;UBERON:0001016,9.31e-24,75;UBERON:0002020,7.99e-19,34;UBERON:0003528,1.55e-16,29;UBERON:0002791,1.55e-16,29;UBERON:0001893,1.55e-16,29;UBERON:0004121,6.56e-16,95;UBERON:0000924,6.56e-16,95;UBERON:0006601,6.56e-16,95;UBERON:0000073,5.86e-13,54;UBERON:0000956,6.73e-13,21;UBERON:0001869,6.73e-13,21;UBERON:0000203,6.73e-13,21;UBERON:0002619,7.37e-13,17;UBERON:0002021,1.12e-12,10;UBERON:0000411,1.12e-12,10;UBERON:0001950,1.12e-12,10;UBERON:0002384,5.20e-12,46;UBERON:0001049,8.26e-11,52;UBERON:0005068,8.26e-11,52;UBERON:0006241,8.26e-11,52;UBERON:0007135,8.26e-11,52;UBERON:0002780,1.42e-10,39;UBERON:0001890,1.42e-10,39;UBERON:0006240,1.42e-10,39;UBERON:0003080,3.78e-10,40;UBERON:0002410,5.69e-10,9;UBERON:0002346,7.80e-10,64;UBERON:0003075,7.80e-10,64;UBERON:0007284,7.80e-10,64;UBERON:0002616,3.82e-09,46;UBERON:0000955,8.22e-09,47;UBERON:0006238,8.22e-09,47;UBERON:0011216,1.93e-08,194;UBERON:0000010,9.01e-08,11;UBERON:0010371,1.28e-07,73;UBERON:0002371,2.79e-07,16;UBERON:0003056,3.69e-07,49 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,2.50447864973174,0,0.700837921786577,2.1950964985068,1.40788722151667,2.34064526321993,2.39705155515707,1.03703806693937,2.9104124088305,1.31130603628496,4.66353666541928,0.809901069559304,4.19737126876888,1.26184866143295,2.60517423850904,12.3072999021429,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0.570070258369122,0,0,42.5470551217953,12.3012957516914,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0,0,0,9.38869613217647,0.218025156380447,0.659058548203415,2.13872888981712,1.81982348112971,4.31257693094915,0.167782606057736,0,0.672187598284928,1.54355661621568,4.87106847895886,4.12537673821954,2.83243045203437,10.0508286061686,3.80298842103708,0.677689064138264,0.889294796111139,0.899899717281399,6.92206453796882,6.3943210345149,2.99600110518405,1.15265491596466,0.622137673850866,6.48028503992115,2.3135745748652,2.28520787523043,1.76694832761291,3.91970557487853,3.45043695665651,9.19218786610021,1.10115880999389,2.93680877595932,1.38245879930619,6.3305418110493,3.29355516968675,2.6045668527838,4.4669279840221,1.12552522006336,4.12555268997387,2.94628585473668,0.711858403995515,1.86399445825301,0,0,1.15945795480671,6.0229671388697,6.11974200336975,2.15881276655127,7.14754059192436,5.37632264516803,0,0,1.03914401841148,0.35333957451034,0,0,0,7.11066703153331,1.08245520505607,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,4.52373851817817,2.71952841909355,0.491764273019036,0,0,0,0,0,1.89304931649754,1.56175497718655,7.75524231838076,4.77937595905104,5.79276552614225,5.09537755419898,4.85772842009873,1.16902343164525,5.92931666919785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0,0,1.10992976687032,0.0897138566094757,0.503653849092235,0,0,0,0,0,8.471277639256,2.76195141904306,2.29158205375759,2.57779773515531,7.53590771747707,15.8632718451837,6.75022500231806,9.00642406448441,6.34399372577886,8.28416498802912,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,0,2.50447864973174,0,0.700837921786577,2.1950964985068,1.40788722151667,2.34064526321993,2.39705155515707,1.03703806693937,2.9104124088305,1.31130603628496,4.66353666541928,0.809901069559304,4.19737126876888,1.26184866143295,2.60517423850904,12.3072999021429,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0.570070258369122,0,0,42.5470551217953,12.3012957516914,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0,0,0,9.38869613217647,0.218025156380447,0.659058548203415,2.13872888981712,1.81982348112971,4.31257693094915,0.167782606057736,0,0.672187598284928,1.54355661621568,4.87106847895886,4.12537673821954,2.83243045203437,10.0508286061686,3.80298842103708,0.677689064138264,0.889294796111139,0.899899717281399,6.92206453796882,6.3943210345149,2.99600110518405,1.15265491596466,0.622137673850866,6.48028503992115,2.3135745748652,2.28520787523043,1.76694832761291,3.91970557487853,3.45043695665651,9.19218786610021,1.10115880999389,2.93680877595932,1.38245879930619,6.3305418110493,3.29355516968675,2.6045668527838,4.4669279840221,1.12552522006336,4.12555268997387,2.94628585473668,0.711858403995515,1.86399445825301,0,0,1.15945795480671,6.0229671388697,6.11974200336975,2.15881276655127,7.14754059192436,5.37632264516803,0,0,1.03914401841148,0.35333957451034,0,0,0,7.11066703153331,1.08245520505607,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,4.52373851817817,2.71952841909355,0.491764273019036,0,0,0,0,0,1.89304931649754,1.56175497718655,7.75524231838076,4.77937595905104,5.79276552614225,5.09537755419898,4.85772842009873,1.16902343164525,5.92931666919785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0,0,1.10992976687032,0.0897138566094757,0.503653849092235,0,0,0,0,0,8.471277639256,2.76195141904306,2.29158205375759,2.57779773515531,7.53590771747707,15.8632718451837,6.75022500231806,9.00642406448441,6.34399372577886,8.28416498802912,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:68834407..68834410,+ | |short_description=p@chr11:68834407..68834410,+ | ||
}} | }} |
Latest revision as of 09:18, 6 August 2015
Short description: | p@chr11:68834407..68834410, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:68834407..68834410, + |
Coexpression cluster: | MCL_coexpression_mm9:370 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.48e-34 | 91 |
multi fate stem cell | 1.48e-34 | 91 |
stem cell | 1.35e-32 | 97 |
neural cell | 2.20e-27 | 43 |
ectodermal cell | 1.66e-26 | 44 |
neurectodermal cell | 1.66e-26 | 44 |
embryonic cell | 1.78e-26 | 70 |
neuron | 1.08e-25 | 33 |
neuronal stem cell | 1.08e-25 | 33 |
neuroblast | 1.08e-25 | 33 |
electrically signaling cell | 1.08e-25 | 33 |
electrically responsive cell | 1.37e-25 | 39 |
electrically active cell | 1.37e-25 | 39 |
CNS neuron (sensu Vertebrata) | 7.57e-18 | 23 |
neuroblast (sensu Vertebrata) | 7.57e-18 | 23 |
motile cell | 2.66e-13 | 54 |
connective tissue cell | 5.20e-12 | 46 |
mesenchymal cell | 5.20e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 7.17e-11 | 25 |
autonomic neuron | 5.69e-10 | 9 |
myeloid lineage restricted progenitor cell | 7.20e-10 | 13 |
myeloid cell | 1.73e-07 | 16 |
hematopoietic cell | 1.86e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.86e-07 | 32 |
hematopoietic stem cell | 1.86e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.86e-07 | 32 |