FFCP PHASE1:Mm9::chr4:43985359..43985362,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:43985359..43985362,+ | |||
|description=CAGE_peak_at_chr4:43985359..43985362,+ | |description=CAGE_peak_at_chr4:43985359..43985362,+ | ||
|id=chr4:43985359..43985362,+ | |id=chr4:43985359..43985362,+ | ||
|ontology_enrichment_celltype=CL:0000988!3.49e-13!32;CL:0002032!3.49e-13!32;CL:0000037!3.49e-13!32;CL:0000566!3.49e-13!32;CL:0000837!3.49e-13!32;CL:0002320!1.37e-11!46;CL:0000134!1.37e-11!46;CL:0000838!1.73e-11!12;CL:0000542!1.88e-10!13;CL:0000051!1.88e-10!13;CL:0000084!6.44e-10!11;CL:0000827!6.44e-10!11;CL:0000738!2.20e-09!17;CL:0002087!2.20e-09!17;CL:0000034!2.54e-09!97;CL:0000219!4.19e-09!54;CL:0002031!2.17e-08!25;CL:0000624!5.48e-08!8;CL:0000893!1.43e-07!6;CL:0002489!1.43e-07!6;CL:0000898!1.43e-07!6;CL:0000809!1.43e-07!6;CL:0000810!1.43e-07!6;CL:0000895!1.43e-07!6;CL:0000808!1.43e-07!6;CL:0000894!1.43e-07!6;CL:0000806!1.43e-07!6;CL:0000807!1.43e-07!6;CL:0000805!1.43e-07!6;CL:0002425!1.43e-07!6;CL:0002436!1.43e-07!6;CL:0002427!1.43e-07!6;CL:0002428!1.43e-07!6;CL:0002429!1.43e-07!6;CL:0002433!1.43e-07!6;CL:0002431!1.43e-07!6;CL:0002432!1.43e-07!6;CL:0000723!1.64e-07!91;CL:0000048!1.64e-07!91;CL:0000063!2.04e-07!66;CL:0000791!5.27e-07!9;CL:0000789!5.27e-07!9;CL:0002420!5.27e-07!9;CL:0002419!5.27e-07!9;CL:0000790!5.27e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.24e-10,12;CL:0000542,1.43e-09,13;CL:0000051,1.43e-09,13;CL:0000034,1.56e-08,97;CL:0000084,1.70e-07,11;CL:0000827,1.70e-07,11;CL:0000738,2.72e-07,17;CL:0002087,2.72e-07,17;CL:0000988,4.85e-07,32;CL:0002032,4.85e-07,32;CL:0000037,4.85e-07,32;CL:0000837,4.85e-07,32;CL:0000213,9.48e-07,1;CL:0002078,9.48e-07,1;CL:0000115,9.48e-07,1;CL:0002262,9.48e-07,1;CL:1000398,9.48e-07,1 | |||
|ontology_enrichment_disease=DOID:0060100!3.79e-07!3;DOID:4045!3.79e-07!3 | |ontology_enrichment_disease=DOID:0060100!3.79e-07!3;DOID:4045!3.79e-07!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.36e-17,3;DOID:4045,7.36e-17,3;DOID:0050686,1.08e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.37e-11!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,9.48e-07,1;UBERON:0001281,9.48e-07,1;UBERON:0000353,9.48e-07,1;UBERON:0003497,9.48e-07,1;UBERON:0003909,9.48e-07,1;UBERON:0003928,9.48e-07,1;UBERON:0003835,9.48e-07,1;UBERON:0003513,9.48e-07,1;UBERON:0001280,9.48e-07,1;UBERON:0004647,9.48e-07,1;UBERON:0002294,9.48e-07,1;UBERON:0001173,9.48e-07,1;UBERON:0004912,9.48e-07,1;UBERON:0005171,9.48e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,2.1950964985068,0.281577444303333,0.70219357896598,0.171217968225505,0,1.02720437958723,1.31130603628496,0,0,0,0.946386496074713,0.411343300817216,0,0,0.992909512008853,1.04479915655574,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,3.1253413780952,2.61761871986899,34.7056577938298,6.83045484958446,2.91306211818692,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,1.51004345451963,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,3.18850937571846,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,1.79970819298022,0.635351135365324,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,2.20971958992012,3.21888340344413,1.38199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,2.1950964985068,0.281577444303333,0.70219357896598,0.171217968225505,0,1.02720437958723,1.31130603628496,0,0,0,0.946386496074713,0.411343300817216,0,0,0.992909512008853,1.04479915655574,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,3.1253413780952,2.61761871986899,34.7056577938298,6.83045484958446,2.91306211818692,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,1.51004345451963,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,3.18850937571846,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,1.79970819298022,0.635351135365324,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,2.20971958992012,3.21888340344413,1.38199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:43985359..43985362,+ | |short_description=p@chr4:43985359..43985362,+ | ||
}} | }} |
Latest revision as of 12:13, 5 August 2015
Short description: | p@chr4:43985359..43985362, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:43985359..43985362, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.24e-10 | 12 |
lymphocyte | 1.43e-09 | 13 |
common lymphoid progenitor | 1.43e-09 | 13 |
stem cell | 1.56e-08 | 97 |
T cell | 1.70e-07 | 11 |
pro-T cell | 1.70e-07 | 11 |
leukocyte | 2.72e-07 | 17 |
nongranular leukocyte | 2.72e-07 | 17 |
hematopoietic cell | 4.85e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.85e-07 | 32 |
hematopoietic stem cell | 4.85e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.85e-07 | 32 |
lining cell | 9.48e-07 | 1 |
meso-epithelial cell | 9.48e-07 | 1 |
endothelial cell | 9.48e-07 | 1 |
endothelial cell of sinusoid | 9.48e-07 | 1 |
endothelial cell of hepatic sinusoid | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 9.48e-07 | 1 |
hepatic sinusoid | 9.48e-07 | 1 |
parenchyma | 9.48e-07 | 1 |
abdomen blood vessel | 9.48e-07 | 1 |
sinusoid | 9.48e-07 | 1 |
digestive system duct | 9.48e-07 | 1 |
abdominal segment blood vessel | 9.48e-07 | 1 |
trunk blood vessel | 9.48e-07 | 1 |
liver parenchyma | 9.48e-07 | 1 |
liver lobule | 9.48e-07 | 1 |
biliary system | 9.48e-07 | 1 |
biliary tree | 9.48e-07 | 1 |
biliary bud | 9.48e-07 | 1 |
hepatic duct | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.36e-17 | 3 |
muscle cancer | 7.36e-17 | 3 |
organ system cancer | 1.08e-08 | 6 |