FFCP PHASE1:Mm9::chr2:163149068..163149077,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:163149068..163149077,+ | |||
|description=CAGE_peak_at_chr2:163149068..163149077,+ | |description=CAGE_peak_at_chr2:163149068..163149077,+ | ||
|id=chr2:163149068..163149077,+ | |id=chr2:163149068..163149077,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.10e-19!71;UBERON:0003075!4.10e-19!71;UBERON:0007284!4.10e-19!71;UBERON:0000033!7.49e-19!63;UBERON:0003056!5.22e-17!49;UBERON:0007811!9.91e-16!86;UBERON:0004121!3.43e-15!102;UBERON:0000924!3.43e-15!102;UBERON:0006601!3.43e-15!102;UBERON:0000153!3.48e-14!94;UBERON:0000955!1.07e-11!50;UBERON:0006238!1.07e-11!50;UBERON:0000970!1.66e-11!9;UBERON:0000019!1.66e-11!9;UBERON:0000047!1.66e-11!9;UBERON:0004088!1.66e-11!9;UBERON:0002104!1.66e-11!9;UBERON:0001456!1.66e-11!9;UBERON:0003072!1.66e-11!9;UBERON:0003071!1.66e-11!9;UBERON:0004128!1.66e-11!9;UBERON:0002616!5.45e-11!49;UBERON:0001049!7.72e-11!52;UBERON:0005068!7.72e-11!52;UBERON:0006241!7.72e-11!52;UBERON:0007135!7.72e-11!52;UBERON:0000020!1.63e-09!12;UBERON:0001032!1.63e-09!12;UBERON:0004456!1.63e-09!12;UBERON:0000073!2.79e-09!75;UBERON:0001016!2.79e-09!75;UBERON:0003080!3.66e-09!40;UBERON:0001017!3.69e-09!73;UBERON:0005743!3.69e-09!73;UBERON:0001444!6.18e-09!11;UBERON:0005085!1.47e-08!13;UBERON:0002780!2.46e-08!39;UBERON:0001890!2.46e-08!39;UBERON:0006240!2.46e-08!39;UBERON:0000483!4.42e-08!181;UBERON:0000119!8.05e-08!183;UBERON:0002420!1.68e-07!8;UBERON:0007245!1.68e-07!8;UBERON:0010009!1.68e-07!8;UBERON:0010011!1.68e-07!8;UBERON:0000454!1.68e-07!8;UBERON:0000475!4.06e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002259,1.16e-13,1;UBERON:0002314,1.16e-13,1;UBERON:0004061,1.16e-13,1;UBERON:0006777,1.16e-13,1;UBERON:0005882,1.16e-13,1;UBERON:0002950,2.08e-13,4;UBERON:0001891,2.08e-13,4;UBERON:0009616,2.08e-13,4;UBERON:0010286,2.08e-13,4;UBERON:0000970,4.50e-13,9;UBERON:0000019,4.50e-13,9;UBERON:0000047,4.50e-13,9;UBERON:0010312,4.50e-13,9;UBERON:0004088,4.50e-13,9;UBERON:0002104,4.50e-13,9;UBERON:0001456,4.50e-13,9;UBERON:0003072,4.50e-13,9;UBERON:0004128,4.50e-13,9;UBERON:0003071,4.50e-13,9;UBERON:0001444,7.91e-11,11;UBERON:0000020,5.53e-10,12;UBERON:0001032,5.53e-10,12;UBERON:0004456,5.53e-10,12;UBERON:0003056,2.22e-09,49;UBERON:0000033,2.87e-09,13;UBERON:0005085,2.87e-09,13;UBERON:0002346,3.29e-07,64;UBERON:0003075,3.29e-07,64;UBERON:0007284,3.29e-07,64;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287536413054709,0,0,0.510749352340751,0.307213066512487,0.131886287730194,0.457438218012048,0.52091337055676,0.558365998002762,0,1.22238598221448,0,0.142371680799103,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,1.38369298353635,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,1.19832511523858,0.915001205637253,0.376963056338593,0,0,2.49345653471472,0.324482526135515,0.101839363850316,0,0,0.210441855886474,0.650602214813519,0.459804208866946,0.360124259610698,0.753524089178575,1.56483948048054,1.0249097622788,1.03071897015702,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.491589944147214,0,0.433947175744535,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0.632022241256357,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0.419226325255965,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287536413054709,0,0,0.510749352340751,0.307213066512487,0.131886287730194,0.457438218012048,0.52091337055676,0.558365998002762,0,1.22238598221448,0,0.142371680799103,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,1.38369298353635,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,1.19832511523858,0.915001205637253,0.376963056338593,0,0,2.49345653471472,0.324482526135515,0.101839363850316,0,0,0.210441855886474,0.650602214813519,0.459804208866946,0.360124259610698,0.753524089178575,1.56483948048054,1.0249097622788,1.03071897015702,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.491589944147214,0,0.433947175744535,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0.632022241256357,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0.419226325255965,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:163149068..163149077,+ | |short_description=p@chr2:163149068..163149077,+ | ||
}} | }} |
Latest revision as of 11:11, 4 August 2015
Short description: | p@chr2:163149068..163149077, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:163149068..163149077, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpora quadrigemina | 1.16e-13 | 1 |
midbrain tectum | 1.16e-13 | 1 |
neural tube mantle layer | 1.16e-13 | 1 |
tectal plate | 1.16e-13 | 1 |
neural tube alar plate | 1.16e-13 | 1 |
regional part of midbrain | 2.08e-13 | 4 |
midbrain | 2.08e-13 | 4 |
presumptive midbrain | 2.08e-13 | 4 |
midbrain neural tube | 2.08e-13 | 4 |
eye | 4.50e-13 | 9 |
camera-type eye | 4.50e-13 | 9 |
simple eye | 4.50e-13 | 9 |
immature eye | 4.50e-13 | 9 |
ocular region | 4.50e-13 | 9 |
visual system | 4.50e-13 | 9 |
face | 4.50e-13 | 9 |
optic cup | 4.50e-13 | 9 |
optic vesicle | 4.50e-13 | 9 |
eye primordium | 4.50e-13 | 9 |
subdivision of head | 7.91e-11 | 11 |
sense organ | 5.53e-10 | 12 |
sensory system | 5.53e-10 | 12 |
entire sense organ system | 5.53e-10 | 12 |
pre-chordal neural plate | 2.22e-09 | 49 |
head | 2.87e-09 | 13 |
ectodermal placode | 2.87e-09 | 13 |
neurectoderm | 3.29e-07 | 64 |
neural plate | 3.29e-07 | 64 |
presumptive neural plate | 3.29e-07 | 64 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |