FFCP PHASE1:Mm9::chr5:32549822..32549841,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=665270 | |EntrezGene=665270 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TTY0 | |UniProt=Q3TTY0 | ||
|association_with_transcript=98bp_to_ENSMUST00000101376_5end | |association_with_transcript=98bp_to_ENSMUST00000101376_5end | ||
|cluster_id=chr5:32549822..32549841,+ | |||
|description=CAGE_peak_1_at_Plb1_5end | |description=CAGE_peak_1_at_Plb1_5end | ||
|id=chr5:32549822..32549841,+ | |id=chr5:32549822..32549841,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.09e-16!6;CL:0000677!1.09e-16!6;CL:0000212!1.09e-16!6;CL:0000584!1.09e-16!6;CL:0000075!3.27e-14!7;CL:0002563!6.63e-11!9;CL:0002251!6.63e-11!9;CL:0000473!2.45e-09!3;CL:0000627!2.45e-09!3;CL:0000682!2.45e-09!3;CL:0000066!9.38e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.39e-22,6;CL:0000677,1.39e-22,6;CL:0000584,1.39e-22,6;CL:0000075,2.69e-19,7;CL:0002563,6.56e-15,9;CL:0002251,6.56e-15,9;CL:0000682,2.31e-12,3;CL:0000066,3.51e-11,25;CL:0002076,9.53e-09,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.01e-29!43;UBERON:0000344!2.74e-21!15;UBERON:0005409!2.63e-20!59;UBERON:0001242!1.10e-16!13;UBERON:0000060!1.10e-16!13;UBERON:0001262!1.10e-16!13;UBERON:0004786!1.10e-16!13;UBERON:0004923!1.88e-12!24;UBERON:0003350!6.63e-11!9;UBERON:0004808!6.63e-11!9;UBERON:0001277!6.63e-11!9;UBERON:0000331!9.86e-10!3;UBERON:0002116!9.86e-10!3;UBERON:0001204!9.86e-10!3;UBERON:0001168!9.86e-10!3;UBERON:0000485!8.48e-09!11;UBERON:0001007!1.82e-08!128;UBERON:0001555!1.82e-08!128;UBERON:0007026!1.82e-08!128;UBERON:0004119!2.97e-08!130;UBERON:0000925!2.97e-08!130;UBERON:0006595!2.97e-08!130;UBERON:0004921!7.34e-07!126;UBERON:0004185!7.34e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.30e-30,31;UBERON:0000344,1.51e-29,15;UBERON:0001242,4.20e-23,13;UBERON:0001262,4.20e-23,13;UBERON:0004786,4.20e-23,13;UBERON:0005409,8.97e-19,47;UBERON:0004923,8.74e-18,24;UBERON:0002108,3.07e-16,4;UBERON:0003350,6.56e-15,9;UBERON:0004808,6.56e-15,9;UBERON:0001277,6.56e-15,9;UBERON:0000331,6.55e-13,3;UBERON:0002116,6.55e-13,3;UBERON:0001204,6.55e-13,3;UBERON:0001168,6.55e-13,3;UBERON:0000485,4.12e-12,11;UBERON:0001962,1.75e-08,2;UBERON:0001961,1.75e-08,2;UBERON:0001744,1.75e-08,2;UBERON:0001007,7.48e-08,116;UBERON:0001555,7.48e-08,116;UBERON:0007026,7.48e-08,116;UBERON:0004119,1.16e-07,118;UBERON:0000925,1.16e-07,118;UBERON:0006595,1.16e-07,118 | |||
|phase1_expression=0,96.666187916103,53.2349110085757,127.942361382789,99.6782502593231,3.52546471014969,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.198901305044,34.1819828790083,96.4709699713234,61.1682034545886,59.9010026866772,194.583981523327,818.341831330495,13.9690221712842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.98844288843212,0,0,0,0,0,0,0,0,0,0,27.5183150122935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,184.695450915812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23120906661671,0,0,0.257734922644187,0.605050573870028,0.667134131534611,0.570676878337677,105.819980724426,0.164698954724011,0.251335208800269,0.198956472041151,0,152.799299471218,131.628072373689,133.026370533917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6547735443104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,96.666187916103,53.2349110085757,127.942361382789,99.6782502593231,3.52546471014969,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.198901305044,34.1819828790083,96.4709699713234,61.1682034545886,59.9010026866772,194.583981523327,818.341831330495,13.9690221712842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.98844288843212,0,0,0,0,0,0,0,0,0,0,27.5183150122935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,184.695450915812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23120906661671,0,0,0.257734922644187,0.605050573870028,0.667134131534611,0.570676878337677,105.819980724426,0.164698954724011,0.251335208800269,0.198956472041151,0,152.799299471218,131.628072373689,133.026370533917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6547735443104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Plb1 | |short_description=p1@Plb1 | ||
}} | }} |
Latest revision as of 22:49, 25 September 2015
Short description: | p1@Plb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Plb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | 98bp_to_ENSMUST00000101376_5end |
EntrezGene: | Plb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.39e-22 | 6 |
gut absorptive cell | 1.39e-22 | 6 |
enterocyte | 1.39e-22 | 6 |
columnar/cuboidal epithelial cell | 2.69e-19 | 7 |
intestinal epithelial cell | 6.56e-15 | 9 |
epithelial cell of alimentary canal | 6.56e-15 | 9 |
M cell of gut | 2.31e-12 | 3 |
epithelial cell | 3.51e-11 | 25 |
endo-epithelial cell | 9.53e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.30e-30 | 31 |
mucosa | 1.51e-29 | 15 |
intestinal mucosa | 4.20e-23 | 13 |
wall of intestine | 4.20e-23 | 13 |
gastrointestinal system mucosa | 4.20e-23 | 13 |
gastrointestinal system | 8.97e-19 | 47 |
organ component layer | 8.74e-18 | 24 |
small intestine | 3.07e-16 | 4 |
epithelium of mucosa | 6.56e-15 | 9 |
gastrointestinal system epithelium | 6.56e-15 | 9 |
intestinal epithelium | 6.56e-15 | 9 |
ileal mucosa | 6.55e-13 | 3 |
ileum | 6.55e-13 | 3 |
mucosa of small intestine | 6.55e-13 | 3 |
wall of small intestine | 6.55e-13 | 3 |
simple columnar epithelium | 4.12e-12 | 11 |
gut-associated lymphoid tissue | 1.75e-08 | 2 |
mucosa-associated lymphoid tissue | 1.75e-08 | 2 |
lymphoid tissue | 1.75e-08 | 2 |
digestive system | 7.48e-08 | 116 |
digestive tract | 7.48e-08 | 116 |
primitive gut | 7.48e-08 | 116 |
endoderm-derived structure | 1.16e-07 | 118 |
endoderm | 1.16e-07 | 118 |
presumptive endoderm | 1.16e-07 | 118 |