FFCP PHASE1:Mm9::chr14:55272499..55272538,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56215 | |EntrezGene=56215 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1125 | |||
|TSSclassifier=NA | |||
|UniProt=B8JJ92,B8JJ90,Q52KR6,B8JJ93,Q9JIX8,B8JJ91,Q7TSL7,B8JJ95 | |UniProt=B8JJ92,B8JJ90,Q52KR6,B8JJ93,Q9JIX8,B8JJ91,Q7TSL7,B8JJ95 | ||
|association_with_transcript=0bp_to_ENSMUST00000022794,ENSMUST00000123875,ENSMUST00000136909,ENSMUST00000137763,ENSMUST00000141453,ENSMUST00000148754,ENSMUST00000149713,ENSMUST00000150371,NM_001085472,NM_001242605,NM_001242606,NM_019567,uc007twq.2,uc007twr.2,uc007tws.2,uc011zld.1,uc011zle.1_5end | |association_with_transcript=0bp_to_ENSMUST00000022794,ENSMUST00000123875,ENSMUST00000136909,ENSMUST00000137763,ENSMUST00000141453,ENSMUST00000148754,ENSMUST00000149713,ENSMUST00000150371,NM_001085472,NM_001242605,NM_001242606,NM_019567,uc007twq.2,uc007twr.2,uc007tws.2,uc011zld.1,uc011zle.1_5end | ||
|cluster_id=chr14:55272499..55272538,- | |||
|description=CAGE_peak_2_at_Acin1_5end | |description=CAGE_peak_2_at_Acin1_5end | ||
|id=chr14:55272499..55272538,- | |id=chr14:55272499..55272538,- | ||
|ontology_enrichment_celltype=CL:0000540!3.04e-07!33;CL:0000047!3.04e-07!33;CL:0000031!3.04e-07!33;CL:0000404!3.04e-07!33 | |ontology_enrichment_celltype=CL:0000540!3.04e-07!33;CL:0000047!3.04e-07!33;CL:0000031!3.04e-07!33;CL:0000404!3.04e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.04e-07,33;CL:0000047,3.04e-07,33;CL:0000031,3.04e-07,33;CL:0000404,3.04e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!9.89e-13!94;UBERON:0007811!3.33e-10!86;UBERON:0003056!1.63e-08!49;UBERON:0002346!4.64e-08!71;UBERON:0003075!4.64e-08!71;UBERON:0007284!4.64e-08!71;UBERON:0001017!1.16e-07!73;UBERON:0005743!1.16e-07!73;UBERON:0000073!4.10e-07!75;UBERON:0001016!4.10e-07!75;UBERON:0003080!5.57e-07!40 | |ontology_enrichment_uberon=UBERON:0000153!9.89e-13!94;UBERON:0007811!3.33e-10!86;UBERON:0003056!1.63e-08!49;UBERON:0002346!4.64e-08!71;UBERON:0003075!4.64e-08!71;UBERON:0007284!4.64e-08!71;UBERON:0001017!1.16e-07!73;UBERON:0005743!1.16e-07!73;UBERON:0000073!4.10e-07!75;UBERON:0001016!4.10e-07!75;UBERON:0003080!5.57e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.63e-08,49;UBERON:0002346,2.39e-08,64;UBERON:0003075,2.39e-08,64;UBERON:0007284,2.39e-08,64;UBERON:0001017,1.16e-07,73;UBERON:0000153,1.86e-07,43;UBERON:0001016,4.10e-07,75;UBERON:0003080,5.57e-07,40;UBERON:0010371,8.24e-07,73 | |||
|phase1_expression=29.6275367143869,1.39590163055744,0.909998478779072,0.90739263392049,1.00179145989269,14.2697381125106,14.0167584357315,14.0744422551318,33.0853497056417,30.8965174745031,67.2886615126235,91.4986663676509,14.2096605842901,18.2708641055705,13.9906099962578,13.3633676477285,13.2916756844348,16.8772258466657,20.1558217400436,19.9463136345074,17.6039610612714,44.4823461379966,31.6051744858112,13.9193407830264,8.48814339948529,2.8711598205751,6.46142994238612,8.83432054012145,5.32065574477847,8.06496415231778,9.3126814475228,27.3063189587641,23.9875267157982,0,23.9746844393558,24.9351968037739,17.9669033510885,2.51118978442145,3.1253413780952,2.61761871986899,1.76469446409304,1.36609096991689,1.45653105909346,25.0534667771399,20.7822709000005,25.1459050461504,14.8654355426127,18.7501634487184,11.2039953194581,9.3326351555656,13.9986421625363,11.5002051491977,25.8385213328914,18.1340535502836,22.8543783416875,14.1492689819771,14.8997388768154,9.7977697532714,61.7065205621773,67.7108453468202,41.1990412279016,12.1984031544888,13.3394219416671,9.44894703145469,16.8107281636386,12.7886420690298,18.2756067416227,19.2109152660777,61.1768712620018,67.232957289182,60.7839138305494,34.5637691128602,27.1668305370485,61.245399607477,78.4015952929173,70.7798465689716,16.5173821499083,21.5791601363967,22.733766921924,60.0082609172382,52.7883703585904,75.0115253601734,18.9844439320939,18.5711661310454,25.2117108831737,32.9984015730508,35.8776635613739,35.975093044283,16.4325839533009,17.7593166250946,14.4932244350839,4.30211938490693,6.11974200336975,8.63525106620507,4.54843492213368,5.82434953226536,10.9546647702766,14.9978683868691,12.4697282209377,7.0667914902068,22.6757905840456,6.41632387071589,15.2883143823987,7.11066703153331,14.2884087067401,10.387754484479,17.1878311305026,8.5637909789295,35.9923658269569,23.8991843894368,33.135697412332,32.8822716577113,27.673859670727,26.3764620967089,27.0454026412121,20.3579877954074,9.14621380617183,11.7125479105128,19.4614321428972,24.4267943420588,23.1883594383413,23.7588874036259,13.0474232852686,26.0574909340277,23.0391377494801,9.96282515313506,44.2117809426846,28.1954283566902,44.9828603838649,41.9413790333504,34.312545211397,73.8847590423643,36.3292829201858,36.0558794835766,28.6747501492193,31.6370462982127,23.6267324132734,18.5366386209039,14.1524744722858,9.89076722666428,74.1686524887411,40.0029661714243,55.0990117204369,53.8016199673503,46.4689289203569,50.348692071946,38.8862156922875,18.3679393224701,63.3769899222556,75.8315381472955,58.415773222431,43.1815592882322,54.4972608482172,30.6461906539507,32.5135775524551,57.1228345769075,30.8973802417823,29.3376614110775,26.1430419443945,38.5253936916033,42.2146907965973,40.8740879516504,39.2996261071449,42.5010740574392,38.7210453347319,38.8331687733181,22.534965717568,16.8142093008724,22.7092592880603,22.1626076506779,15.3220050041667,14.9123987173839,18.2226595691572,11.6759584321523,39.1139304329277,69.0489949064999,4.29544417878937,17.7181879664575,65.4794929143168,63.4006114178997,43.8149368495117,29.2441110703847,26.4629872175396,19.7834651157062,10.4396393539793,10.7054320570607,18.8501406600202,12.7332142106337,17.3518037536017,17.0775687644302,11.2391785934841,7.96565093017469,54.6243554744875,51.8688247248169,45.0830942692322,51.5237859448645,37.4328300233518,31.6312547705337,24.1563571814663,17.8608279055319,15.071877872772,9.25478729413504,10.6722945751374,34.2032466717993,35.1840601252633,24.9596944747188,22.5174734741238,20.9824128984603,20.3700681425136,14.0971107350897,11.5116011010275,16.748246204473,34.5043695665651,10.4199465347181,11.2333562321242,16.6702059445094,16.1457672169721,8.20153986317724,10.3461786493299,43.393533295441,51.3339675792381,68.4072695674008,52.335925368336,32.8312264585959,21.4239276797412,9.56154874503214,28.059055650902,21.7035395855799,21.2074842314458,14.9115616391322,14.850908440467,9.83613598354279,3.01582567878545,10.3342079925555,11.8023425524569,11.313406598494,27.1330497079368,25.0833009307315,21.4754778443445,17.1680230498974,32.4973465998744,38.2629969410706,45.6697603193534,44.4481964191747,35.4249891791007,39.9137908412254,38.8618273607899,42.6693552550515,45.8533822417967,44.6636629826312,38.6077031766491,41.4892856544705,24.9217047810971,37.7781581607106,6.63725691699814,44.9144176886716,42.9299450889946,31.3084432394791,23.0335476447003,21.8278955040189,17.8315522286073,24.3567598749929,28.163292892393,13.9056173491759,13.7044191147498,13.4076206222643,32.6822021523636,74.905415117025,78.7794384236975,51.2265513725506,48.9459044852675,40.3113527780679,38.5044708208963,23.1393361327095,22.7631556821799,20.9713750155182,16.9806866502321,19.1268053412117,27.9333458183917,25.5726801695381,23.635724112621,25.9342621597197,13.4081184849731,26.3303928854924,19.4792804109552,32.1963514022627,28.5199572149356,22.9809517545723,29.6626474154625,27.6821589579892,44.0244133684085,46.0440278144835,44.9149914864377,15.2747298882418,60.8946787643685,36.1908651485791,39.6379600816011,33.0359507702861,28.3871332870031,22.2526171534954,18.8449879053766,13.3495530411855,8.81381818384192,10.5627683224777,6.20062232552609,50.9851422009968,35.0771999769047,35.5845674669607,25.961124519024,34.9739179765911,38.7278887530988,36.457227756306,39.9514102261958,13.2871266454303,8.92893019399383,60.6741351606102,46.6267995167378,50.6365018822598,59.2438952778745,61.2271299182786,48.0808878570661,49.1599388536673,55.8266412719902,59.0653732196664,54.0306259183949,54.345313788757,57.8899811594129,54.5521142100668,50.7245755468009,17.6849699219865,27.526258218384,27.9010094055469,25.8542309200681,13.3300819882211,16.3283753642528,35.1651118593149,21.2224695288275,7.02200945649509,32.1908550291728,34.0640675015311,37.2382083735608,31.1054260042075,27.4033007908257,27.9495742034189,21.6007200074178,32.4231266321439,30.8136838109259,28.4768171463501,72.0284192234186,73.4205767057897,50.5371473032237,46.1902762429759,35.634237646757,27.0249957421521,31.1145418922261,34.6138896161342,27.2781328153043,25.7751155999073,35.994060584414,34.3299941322659,31.088980480001,28.6192431249766,32.221298084099,29.0539151682675,27.4645852489307,30.8654752741928,39.1481605763141,29.8813807872827,29.8296249575311,30.3483628532467,31.4735770730464,39.6795717406257,31.9971893412124,32.5766240382955,33.8416749814629,28.6745985467249,32.457183209161,20.7622640513363,28.9469444222985,25.7096699000221,20.4615521584845,32.3817998078669,35.6877230315112,41.9681770935749,31.5807671401301,24.495300161506,14.3466249051633,17.4267221104417,17.1582198359112 | |phase1_expression=29.6275367143869,1.39590163055744,0.909998478779072,0.90739263392049,1.00179145989269,14.2697381125106,14.0167584357315,14.0744422551318,33.0853497056417,30.8965174745031,67.2886615126235,91.4986663676509,14.2096605842901,18.2708641055705,13.9906099962578,13.3633676477285,13.2916756844348,16.8772258466657,20.1558217400436,19.9463136345074,17.6039610612714,44.4823461379966,31.6051744858112,13.9193407830264,8.48814339948529,2.8711598205751,6.46142994238612,8.83432054012145,5.32065574477847,8.06496415231778,9.3126814475228,27.3063189587641,23.9875267157982,0,23.9746844393558,24.9351968037739,17.9669033510885,2.51118978442145,3.1253413780952,2.61761871986899,1.76469446409304,1.36609096991689,1.45653105909346,25.0534667771399,20.7822709000005,25.1459050461504,14.8654355426127,18.7501634487184,11.2039953194581,9.3326351555656,13.9986421625363,11.5002051491977,25.8385213328914,18.1340535502836,22.8543783416875,14.1492689819771,14.8997388768154,9.7977697532714,61.7065205621773,67.7108453468202,41.1990412279016,12.1984031544888,13.3394219416671,9.44894703145469,16.8107281636386,12.7886420690298,18.2756067416227,19.2109152660777,61.1768712620018,67.232957289182,60.7839138305494,34.5637691128602,27.1668305370485,61.245399607477,78.4015952929173,70.7798465689716,16.5173821499083,21.5791601363967,22.733766921924,60.0082609172382,52.7883703585904,75.0115253601734,18.9844439320939,18.5711661310454,25.2117108831737,32.9984015730508,35.8776635613739,35.975093044283,16.4325839533009,17.7593166250946,14.4932244350839,4.30211938490693,6.11974200336975,8.63525106620507,4.54843492213368,5.82434953226536,10.9546647702766,14.9978683868691,12.4697282209377,7.0667914902068,22.6757905840456,6.41632387071589,15.2883143823987,7.11066703153331,14.2884087067401,10.387754484479,17.1878311305026,8.5637909789295,35.9923658269569,23.8991843894368,33.135697412332,32.8822716577113,27.673859670727,26.3764620967089,27.0454026412121,20.3579877954074,9.14621380617183,11.7125479105128,19.4614321428972,24.4267943420588,23.1883594383413,23.7588874036259,13.0474232852686,26.0574909340277,23.0391377494801,9.96282515313506,44.2117809426846,28.1954283566902,44.9828603838649,41.9413790333504,34.312545211397,73.8847590423643,36.3292829201858,36.0558794835766,28.6747501492193,31.6370462982127,23.6267324132734,18.5366386209039,14.1524744722858,9.89076722666428,74.1686524887411,40.0029661714243,55.0990117204369,53.8016199673503,46.4689289203569,50.348692071946,38.8862156922875,18.3679393224701,63.3769899222556,75.8315381472955,58.415773222431,43.1815592882322,54.4972608482172,30.6461906539507,32.5135775524551,57.1228345769075,30.8973802417823,29.3376614110775,26.1430419443945,38.5253936916033,42.2146907965973,40.8740879516504,39.2996261071449,42.5010740574392,38.7210453347319,38.8331687733181,22.534965717568,16.8142093008724,22.7092592880603,22.1626076506779,15.3220050041667,14.9123987173839,18.2226595691572,11.6759584321523,39.1139304329277,69.0489949064999,4.29544417878937,17.7181879664575,65.4794929143168,63.4006114178997,43.8149368495117,29.2441110703847,26.4629872175396,19.7834651157062,10.4396393539793,10.7054320570607,18.8501406600202,12.7332142106337,17.3518037536017,17.0775687644302,11.2391785934841,7.96565093017469,54.6243554744875,51.8688247248169,45.0830942692322,51.5237859448645,37.4328300233518,31.6312547705337,24.1563571814663,17.8608279055319,15.071877872772,9.25478729413504,10.6722945751374,34.2032466717993,35.1840601252633,24.9596944747188,22.5174734741238,20.9824128984603,20.3700681425136,14.0971107350897,11.5116011010275,16.748246204473,34.5043695665651,10.4199465347181,11.2333562321242,16.6702059445094,16.1457672169721,8.20153986317724,10.3461786493299,43.393533295441,51.3339675792381,68.4072695674008,52.335925368336,32.8312264585959,21.4239276797412,9.56154874503214,28.059055650902,21.7035395855799,21.2074842314458,14.9115616391322,14.850908440467,9.83613598354279,3.01582567878545,10.3342079925555,11.8023425524569,11.313406598494,27.1330497079368,25.0833009307315,21.4754778443445,17.1680230498974,32.4973465998744,38.2629969410706,45.6697603193534,44.4481964191747,35.4249891791007,39.9137908412254,38.8618273607899,42.6693552550515,45.8533822417967,44.6636629826312,38.6077031766491,41.4892856544705,24.9217047810971,37.7781581607106,6.63725691699814,44.9144176886716,42.9299450889946,31.3084432394791,23.0335476447003,21.8278955040189,17.8315522286073,24.3567598749929,28.163292892393,13.9056173491759,13.7044191147498,13.4076206222643,32.6822021523636,74.905415117025,78.7794384236975,51.2265513725506,48.9459044852675,40.3113527780679,38.5044708208963,23.1393361327095,22.7631556821799,20.9713750155182,16.9806866502321,19.1268053412117,27.9333458183917,25.5726801695381,23.635724112621,25.9342621597197,13.4081184849731,26.3303928854924,19.4792804109552,32.1963514022627,28.5199572149356,22.9809517545723,29.6626474154625,27.6821589579892,44.0244133684085,46.0440278144835,44.9149914864377,15.2747298882418,60.8946787643685,36.1908651485791,39.6379600816011,33.0359507702861,28.3871332870031,22.2526171534954,18.8449879053766,13.3495530411855,8.81381818384192,10.5627683224777,6.20062232552609,50.9851422009968,35.0771999769047,35.5845674669607,25.961124519024,34.9739179765911,38.7278887530988,36.457227756306,39.9514102261958,13.2871266454303,8.92893019399383,60.6741351606102,46.6267995167378,50.6365018822598,59.2438952778745,61.2271299182786,48.0808878570661,49.1599388536673,55.8266412719902,59.0653732196664,54.0306259183949,54.345313788757,57.8899811594129,54.5521142100668,50.7245755468009,17.6849699219865,27.526258218384,27.9010094055469,25.8542309200681,13.3300819882211,16.3283753642528,35.1651118593149,21.2224695288275,7.02200945649509,32.1908550291728,34.0640675015311,37.2382083735608,31.1054260042075,27.4033007908257,27.9495742034189,21.6007200074178,32.4231266321439,30.8136838109259,28.4768171463501,72.0284192234186,73.4205767057897,50.5371473032237,46.1902762429759,35.634237646757,27.0249957421521,31.1145418922261,34.6138896161342,27.2781328153043,25.7751155999073,35.994060584414,34.3299941322659,31.088980480001,28.6192431249766,32.221298084099,29.0539151682675,27.4645852489307,30.8654752741928,39.1481605763141,29.8813807872827,29.8296249575311,30.3483628532467,31.4735770730464,39.6795717406257,31.9971893412124,32.5766240382955,33.8416749814629,28.6745985467249,32.457183209161,20.7622640513363,28.9469444222985,25.7096699000221,20.4615521584845,32.3817998078669,35.6877230315112,41.9681770935749,31.5807671401301,24.495300161506,14.3466249051633,17.4267221104417,17.1582198359112 | ||
|short_description=p2@Acin1 | |short_description=p2@Acin1 | ||
}} | }} |
Latest revision as of 02:29, 26 September 2015
Short description: | p2@Acin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Acin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1125 |
Association with transcript: | 0bp_to_ENSMUST00000022794, ENSMUST00000123875, ENSMUST00000136909, ENSMUST00000137763, ENSMUST00000141453, ENSMUST00000148754, ENSMUST00000149713, ENSMUST00000150371, NM_001085472, NM_001242605, NM_001242606, NM_019567, uc007twq.2, uc007twr.2, uc007tws.2, uc011zld.1, uc011zle.1_5end |
EntrezGene: | Acin1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.04e-07 | 33 |
neuronal stem cell | 3.04e-07 | 33 |
neuroblast | 3.04e-07 | 33 |
electrically signaling cell | 3.04e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 1.63e-08 | 49 |
neurectoderm | 2.39e-08 | 64 |
neural plate | 2.39e-08 | 64 |
presumptive neural plate | 2.39e-08 | 64 |
central nervous system | 1.16e-07 | 73 |
anterior region of body | 1.86e-07 | 43 |
nervous system | 4.10e-07 | 75 |
anterior neural tube | 5.57e-07 | 40 |
ecto-epithelium | 8.24e-07 | 73 |