FFCP PHASE1:Mm9::chr5:143579333..143579347,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231861 | |EntrezGene=231861 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D3YV17 | |UniProt=D3YV17 | ||
|association_with_transcript=0bp_to_ENSMUST00000151477_5end | |association_with_transcript=0bp_to_ENSMUST00000151477_5end | ||
|cluster_id=chr5:143579333..143579347,- | |||
|description=CAGE_peak_2_at_Tnrc18_5end | |description=CAGE_peak_2_at_Tnrc18_5end | ||
|id=chr5:143579333..143579347,- | |id=chr5:143579333..143579347,- | ||
|ontology_enrichment_celltype=CL:0000117!1.21e-10!23;CL:0000337!1.21e-10!23;CL:0000221!7.50e-09!44;CL:0000133!7.50e-09!44;CL:0002319!1.62e-08!43;CL:0000540!1.73e-08!33;CL:0000047!1.73e-08!33;CL:0000031!1.73e-08!33;CL:0000404!1.73e-08!33 | |ontology_enrichment_celltype=CL:0000117!1.21e-10!23;CL:0000337!1.21e-10!23;CL:0000221!7.50e-09!44;CL:0000133!7.50e-09!44;CL:0002319!1.62e-08!43;CL:0000540!1.73e-08!33;CL:0000047!1.73e-08!33;CL:0000031!1.73e-08!33;CL:0000404!1.73e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.17e-10,23;CL:0000337,1.17e-10,23;CL:0000221,7.29e-09,44;CL:0000133,7.29e-09,44;CL:0002319,1.58e-08,43;CL:0000540,1.68e-08,33;CL:0000047,1.68e-08,33;CL:0000031,1.68e-08,33;CL:0000404,1.68e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.87e-09!73;UBERON:0005743!1.87e-09!73;UBERON:0000073!3.51e-09!75;UBERON:0001016!3.51e-09!75;UBERON:0004121!1.30e-08!102;UBERON:0000924!1.30e-08!102;UBERON:0006601!1.30e-08!102;UBERON:0000033!1.28e-07!63;UBERON:0001049!2.02e-07!52;UBERON:0005068!2.02e-07!52;UBERON:0006241!2.02e-07!52;UBERON:0007135!2.02e-07!52;UBERON:0002346!5.26e-07!71;UBERON:0003075!5.26e-07!71;UBERON:0007284!5.26e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.80e-09,73;UBERON:0004121,2.09e-09,95;UBERON:0000924,2.09e-09,95;UBERON:0006601,2.09e-09,95;UBERON:0001016,3.39e-09,75;UBERON:0010314,5.14e-08,92;UBERON:0000073,5.38e-08,54;UBERON:0002346,6.08e-08,64;UBERON:0003075,6.08e-08,64;UBERON:0007284,6.08e-08,64;UBERON:0001049,1.97e-07,52;UBERON:0005068,1.97e-07,52;UBERON:0006241,1.97e-07,52;UBERON:0007135,1.97e-07,52;UBERON:0010371,3.55e-07,73 | |||
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| ||
|short_description=p2@Tnrc18 | |short_description=p2@Tnrc18 | ||
}} | }} |
Latest revision as of 16:35, 25 September 2015
Short description: | p2@Tnrc18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tnrc18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000151477_5end |
EntrezGene: | Tnrc18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.17e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.17e-10 | 23 |
ectodermal cell | 7.29e-09 | 44 |
neurectodermal cell | 7.29e-09 | 44 |
neural cell | 1.58e-08 | 43 |
neuron | 1.68e-08 | 33 |
neuronal stem cell | 1.68e-08 | 33 |
neuroblast | 1.68e-08 | 33 |
electrically signaling cell | 1.68e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.80e-09 | 73 |
ectoderm-derived structure | 2.09e-09 | 95 |
ectoderm | 2.09e-09 | 95 |
presumptive ectoderm | 2.09e-09 | 95 |
nervous system | 3.39e-09 | 75 |
structure with developmental contribution from neural crest | 5.14e-08 | 92 |
regional part of nervous system | 5.38e-08 | 54 |
neurectoderm | 6.08e-08 | 64 |
neural plate | 6.08e-08 | 64 |
presumptive neural plate | 6.08e-08 | 64 |
neural tube | 1.97e-07 | 52 |
neural rod | 1.97e-07 | 52 |
future spinal cord | 1.97e-07 | 52 |
neural keel | 1.97e-07 | 52 |
ecto-epithelium | 3.55e-07 | 73 |