FFCP PHASE1:Mm9::chr16:34943355..34943373,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:34943355..34943373,- | |||
|description=CAGE_peak_at_chr16:34943355..34943373,- | |description=CAGE_peak_at_chr16:34943355..34943373,- | ||
|id=chr16:34943355..34943373,- | |id=chr16:34943355..34943373,- | ||
|ontology_enrichment_celltype=CL:0002563!3.68e-17!9;CL:0002251!3.68e-17!9;CL:0000239!1.29e-15!6;CL:0000677!1.29e-15!6;CL:0000212!1.29e-15!6;CL:0000584!1.29e-15!6;CL:0000075!2.85e-13!7;CL:0000066!1.85e-10!25;CL:0002076!1.02e-09!15;CL:0000473!6.04e-09!3;CL:0000627!6.04e-09!3;CL:0000682!6.04e-09!3;CL:0000223!6.18e-07!20 | |ontology_enrichment_celltype=CL:0002563!3.68e-17!9;CL:0002251!3.68e-17!9;CL:0000239!1.29e-15!6;CL:0000677!1.29e-15!6;CL:0000212!1.29e-15!6;CL:0000584!1.29e-15!6;CL:0000075!2.85e-13!7;CL:0000066!1.85e-10!25;CL:0002076!1.02e-09!15;CL:0000473!6.04e-09!3;CL:0000627!6.04e-09!3;CL:0000682!6.04e-09!3;CL:0000223!6.18e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.19e-29,6;CL:0000677,2.19e-29,6;CL:0000584,2.19e-29,6;CL:0000075,3.79e-25,7;CL:0002563,1.73e-19,9;CL:0002251,1.73e-19,9;CL:0000682,3.66e-16,3;CL:0000066,3.71e-15,25;CL:0002076,1.54e-11,15;CL:0000223,1.52e-08,20;CL:0000473,3.32e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.75e-33!43;UBERON:0000344!3.90e-31!15;UBERON:0001242!1.20e-26!13;UBERON:0000060!1.20e-26!13;UBERON:0001262!1.20e-26!13;UBERON:0004786!1.20e-26!13;UBERON:0005409!1.53e-24!59;UBERON:0004923!3.44e-18!24;UBERON:0003350!3.68e-17!9;UBERON:0004808!3.68e-17!9;UBERON:0001277!3.68e-17!9;UBERON:0000485!8.92e-14!11;UBERON:0001007!8.86e-11!128;UBERON:0001555!8.86e-11!128;UBERON:0007026!8.86e-11!128;UBERON:0004119!1.65e-10!130;UBERON:0000925!1.65e-10!130;UBERON:0006595!1.65e-10!130;UBERON:0004921!4.90e-09!126;UBERON:0004185!4.90e-09!126;UBERON:0000331!9.62e-09!3;UBERON:0002116!9.62e-09!3;UBERON:0001204!9.62e-09!3;UBERON:0001168!9.62e-09!3 | |ontology_enrichment_uberon=UBERON:0000160!2.75e-33!43;UBERON:0000344!3.90e-31!15;UBERON:0001242!1.20e-26!13;UBERON:0000060!1.20e-26!13;UBERON:0001262!1.20e-26!13;UBERON:0004786!1.20e-26!13;UBERON:0005409!1.53e-24!59;UBERON:0004923!3.44e-18!24;UBERON:0003350!3.68e-17!9;UBERON:0004808!3.68e-17!9;UBERON:0001277!3.68e-17!9;UBERON:0000485!8.92e-14!11;UBERON:0001007!8.86e-11!128;UBERON:0001555!8.86e-11!128;UBERON:0007026!8.86e-11!128;UBERON:0004119!1.65e-10!130;UBERON:0000925!1.65e-10!130;UBERON:0006595!1.65e-10!130;UBERON:0004921!4.90e-09!126;UBERON:0004185!4.90e-09!126;UBERON:0000331!9.62e-09!3;UBERON:0002116!9.62e-09!3;UBERON:0001204!9.62e-09!3;UBERON:0001168!9.62e-09!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.54e-38,15;UBERON:0001242,5.97e-37,13;UBERON:0001262,5.97e-37,13;UBERON:0004786,5.97e-37,13;UBERON:0000160,4.86e-29,31;UBERON:0004923,1.55e-23,24;UBERON:0002108,4.80e-20,4;UBERON:0003350,1.73e-19,9;UBERON:0004808,1.73e-19,9;UBERON:0001277,1.73e-19,9;UBERON:0005409,1.74e-18,47;UBERON:0000485,7.01e-16,11;UBERON:0000331,9.20e-16,3;UBERON:0002116,9.20e-16,3;UBERON:0001204,9.20e-16,3;UBERON:0001168,9.20e-16,3;UBERON:0001007,2.38e-07,116;UBERON:0001555,2.38e-07,116;UBERON:0007026,2.38e-07,116;UBERON:0004119,3.48e-07,118;UBERON:0000925,3.48e-07,118;UBERON:0006595,3.48e-07,118 | |||
|phase1_expression=0,9.77131141390211,10.9199817453489,3.32710632437513,2.50447864973174,1.34303417529512,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,0.91763712426868,7.46501553349526,7.75371593086335,6.67960821326256,4.56056206695297,2.26827116783938,10.6430645114546,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,4.29544417878937,2.11560453330835,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.474529061544512,0.494096864172033,0.251335208800269,0,0.58489226135736,4.49409704327111,0.864552199498777,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,9.77131141390211,10.9199817453489,3.32710632437513,2.50447864973174,1.34303417529512,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,0.91763712426868,7.46501553349526,7.75371593086335,6.67960821326256,4.56056206695297,2.26827116783938,10.6430645114546,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,4.29544417878937,2.11560453330835,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.474529061544512,0.494096864172033,0.251335208800269,0,0.58489226135736,4.49409704327111,0.864552199498777,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:34943355..34943373,- | |short_description=p@chr16:34943355..34943373,- | ||
}} | }} |
Latest revision as of 08:50, 6 August 2015
Short description: | p@chr16:34943355..34943373, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:34943355..34943373, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.19e-29 | 6 |
gut absorptive cell | 2.19e-29 | 6 |
enterocyte | 2.19e-29 | 6 |
columnar/cuboidal epithelial cell | 3.79e-25 | 7 |
intestinal epithelial cell | 1.73e-19 | 9 |
epithelial cell of alimentary canal | 1.73e-19 | 9 |
M cell of gut | 3.66e-16 | 3 |
epithelial cell | 3.71e-15 | 25 |
endo-epithelial cell | 1.54e-11 | 15 |
endodermal cell | 1.52e-08 | 20 |
defensive cell | 3.32e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.54e-38 | 15 |
intestinal mucosa | 5.97e-37 | 13 |
wall of intestine | 5.97e-37 | 13 |
gastrointestinal system mucosa | 5.97e-37 | 13 |
intestine | 4.86e-29 | 31 |
organ component layer | 1.55e-23 | 24 |
small intestine | 4.80e-20 | 4 |
epithelium of mucosa | 1.73e-19 | 9 |
gastrointestinal system epithelium | 1.73e-19 | 9 |
intestinal epithelium | 1.73e-19 | 9 |
gastrointestinal system | 1.74e-18 | 47 |
simple columnar epithelium | 7.01e-16 | 11 |
ileal mucosa | 9.20e-16 | 3 |
ileum | 9.20e-16 | 3 |
mucosa of small intestine | 9.20e-16 | 3 |
wall of small intestine | 9.20e-16 | 3 |
digestive system | 2.38e-07 | 116 |
digestive tract | 2.38e-07 | 116 |
primitive gut | 2.38e-07 | 116 |
endoderm-derived structure | 3.48e-07 | 118 |
endoderm | 3.48e-07 | 118 |
presumptive endoderm | 3.48e-07 | 118 |