CL:0005012: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 5: | Line 5: | ||
|def="A ciliated epithelial cell with many cilium." [CL:CVS] | |def="A ciliated epithelial cell with many cilium." [CL:CVS] | ||
|xref= | |xref= | ||
|is_a=CL: | |is_a=CL:0000064;;CL:0000066 | ||
|synonym= | |synonym= | ||
|comment= | |comment= | ||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
Revision as of 17:28, 26 June 2012
| Name: | multi-ciliated epithelial cell |
|---|---|
| Namespace: | cell |
| Definition: | "A ciliated epithelial cell with many cilium." [CL:CVS] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000064(ciliated cell),CL:0000066(epithelial cell) |
|---|
Children
| is a: | CL:0002304 (non-pigmented ciliary epithelial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11242-116D9 (Ciliary Epithelial Cells, donor1)
- 11323-117D9 (Ciliary Epithelial Cells, donor2)
- 11399-118D4 (Ciliary Epithelial Cells, donor3)
Mouse (Mus musculus)
- 11242-116D9 (Ciliary Epithelial Cells, donor1)
- 11323-117D9 (Ciliary Epithelial Cells, donor2)
- 11399-118D4 (Ciliary Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0005012 (multi-ciliated epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.93e-147 | FFCP PHASE1:Hg19::chr12:97856211..97856221,+#_fed2e2938efaf7b7e64c620f5bce9024 | p@chr12:97856211..97856221, + |
| 8.93e-147 | FFCP PHASE2:Hg19::chr12:97856211..97856221,+#_fed2e2938efaf7b7e64c620f5bce9024 | p@chr12:97856211..97856221, + |
| 7.78e-118 | FFCP PHASE1:Hg19::chr8:41119800..41119811,-#_dc717337fb1903b0f3447570714470d7 | p5@SFRP1 |
| 7.78e-118 | FFCP PHASE2:Hg19::chr13:36052762..36052767,-#_dc717337fb1903b0f3447570714470d7 | p@chr13:36052762..36052767, - |
| 7.78e-118 | FFCP PHASE2:Hg19::chr8:41119800..41119811,-#_dc717337fb1903b0f3447570714470d7 | p5@SFRP1 |
| 7.78e-118 | FFCP PHASE1:Hg19::chr13:36052762..36052767,-#_dc717337fb1903b0f3447570714470d7 | p@chr13:36052762..36052767, - |
| 2.59e-117 | FFCP PHASE1:Hg19::chrX:106198807..106198826,-#_324ac7b7abf9c786172fbd11e5f9fcb2 | p@chrX:106198807..106198826, - |
| 2.59e-117 | FFCP PHASE1:Hg19::chr16:58896129..58896134,-#_324ac7b7abf9c786172fbd11e5f9fcb2 | p@chr16:58896129..58896134, - |
| 2.59e-117 | FFCP PHASE2:Hg19::chrX:106198807..106198826,-#_324ac7b7abf9c786172fbd11e5f9fcb2 | p@chrX:106198807..106198826, - |
| 2.59e-117 | FFCP PHASE2:Hg19::chr16:58896129..58896134,-#_324ac7b7abf9c786172fbd11e5f9fcb2 | p@chr16:58896129..58896134, - |
| 4.06e-99 | FFCP PHASE1:Hg19::chr14:61654180..61654191,+#_c1d1356757c619380d201cd0da547198 | p33@PRKCH |
| 4.06e-99 | FFCP PHASE2:Hg19::chr14:61654180..61654191,+#_c1d1356757c619380d201cd0da547198 | p33@PRKCH |
| 1.55e-98 | FFCP PHASE1:Hg19::chrX:106146585..106146594,-#_3b15452f5d936b7edce6f455a0de4def | p2@RIPPLY1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chrX:106146585..106146594,-#_3b15452f5d936b7edce6f455a0de4def | p2@RIPPLY1 |
| 6.24e-88 | FFCP PHASE1:Hg19::chr2:210798666..210798677,+#_7f99ab22d58097061745af51d3e36e3a | p@chr2:210798666..210798677, + |
| 6.24e-88 | FFCP PHASE2:Hg19::chr2:210798666..210798677,+#_7f99ab22d58097061745af51d3e36e3a | p@chr2:210798666..210798677, + |
| 1.52e-87 | FFCP PHASE2:Hg19::chr13:36052713..36052724,-#_74e398d883af5b5ac452ecbdf824b2b1 | p@chr13:36052713..36052724, - |
| 1.52e-87 | FFCP PHASE1:Hg19::chr13:36052713..36052724,-#_74e398d883af5b5ac452ecbdf824b2b1 | p@chr13:36052713..36052724, - |
| 4.06e-85 | FFCP PHASE2:Hg19::chr11:27240276..27240289,-#_c42d72584c3629dcd15100621b1f9fc0 | p1@ENST00000526061 |
| 4.06e-85 | FFCP PHASE1:Hg19::chr11:27240276..27240289,-#_c42d72584c3629dcd15100621b1f9fc0 | p1@ENST00000526061 |
| 9.61e-85 | FFCP PHASE2:Hg19::chr10:91294399..91294401,-#_2a3e2529cb832f2cf31c70c43c4a0c75 | p@chr10:91294399..91294401, - |
| 9.61e-85 | FFCP PHASE1:Hg19::chr10:91294399..91294401,-#_2a3e2529cb832f2cf31c70c43c4a0c75 | p@chr10:91294399..91294401, - |
| 1.28e-84 | FFCP PHASE1:Hg19::chr8:53853672..53853682,-#_048bdc06f7ab505dc79316b9f9d8d561 | p1@BC033145 |
| 1.28e-84 | FFCP PHASE2:Hg19::chr8:53853672..53853682,-#_048bdc06f7ab505dc79316b9f9d8d561 | p1@BC033145 |
| 4.72e-75 | FFCP PHASE1:Hg19::chr2:45166478..45166502,-#_59f45cedb517947065fe91b6fc70467e | p3@ENST00000437916 |
| 4.72e-75 | FFCP PHASE2:Hg19::chr2:45166478..45166502,-#_59f45cedb517947065fe91b6fc70467e | p3@ENST00000437916 |
| 1.66e-74 | FFCP PHASE1:Hg19::chr8:94713146..94713159,+#_ab27667db41d9fe812044631e33c2119 | p8@FAM92A1 |
| 1.66e-74 | FFCP PHASE2:Hg19::chr8:94713146..94713159,+#_ab27667db41d9fe812044631e33c2119 | p8@FAM92A1 |
| 2.75e-74 | FFCP PHASE1:Hg19::chr4:183006122..183006131,-#_90065ea3daf69f1e153ab5320accc392 | p3@ENST00000505537 |
| 2.75e-74 | FFCP PHASE2:Hg19::chr4:183006122..183006131,-#_90065ea3daf69f1e153ab5320accc392 | p3@ENST00000505537 |
| 7.85e-67 | FFCP PHASE1:Hg19::chr3:110846331..110846333,+#_a7ac2385192f187be8789e55839edf28 | p@chr3:110846331..110846333, + |
| 7.85e-67 | FFCP PHASE2:Hg19::chr3:110846331..110846333,+#_a7ac2385192f187be8789e55839edf28 | p@chr3:110846331..110846333, + |
| 9.82e-67 | FFCP PHASE2:Hg19::chr2:237677787..237677800,+#_f359972b5c3adffdd5facace1239fd94 | p@chr2:237677787..237677800, + |
| 9.82e-67 | FFCP PHASE1:Hg19::chr2:237677787..237677800,+#_f359972b5c3adffdd5facace1239fd94 | p@chr2:237677787..237677800, + |
| 1.54e-66 | FFCP PHASE1:Hg19::chr11:89224826..89224839,-#_c9c363f9497b64d08e7dd58b3a06ec5c | p14@NOX4 |
| 1.54e-66 | FFCP PHASE2:Hg19::chr11:89224826..89224839,-#_c9c363f9497b64d08e7dd58b3a06ec5c | p14@NOX4 |
| 1.71e-66 | FFCP PHASE2:Hg19::chr1:218579326..218579337,+#_5ff7d4ce17a7595a738145808b7089a4 | p@chr1:218579326..218579337, + |
| 1.71e-66 | FFCP PHASE1:Hg19::chr1:218579326..218579337,+#_5ff7d4ce17a7595a738145808b7089a4 | p@chr1:218579326..218579337, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:63196015..63196016,+#_936988583d6e1fbf071799bcfb43a5a1 | p@chr2:63196015..63196016, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:30716539..30716546,+#_936988583d6e1fbf071799bcfb43a5a1 | p@chr19:30716539..30716546, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:63196015..63196016,+#_936988583d6e1fbf071799bcfb43a5a1 | p@chr2:63196015..63196016, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:30716539..30716546,+#_936988583d6e1fbf071799bcfb43a5a1 | p@chr19:30716539..30716546, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr7:115723897..115723915,-#_2c965894ec238d9a74a1f745a0c41e91 | p@chr7:115723897..115723915, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr7:115723897..115723915,-#_2c965894ec238d9a74a1f745a0c41e91 | p@chr7:115723897..115723915, - |
| 2.41e-66 | FFCP PHASE1:Hg19::chr3:139258648..139258667,+#_e3ba3b73c9a2cd98f57aec8a9877b4cf | p1@ENST00000381790 |
| 2.41e-66 | FFCP PHASE2:Hg19::chr3:139258648..139258667,+#_e3ba3b73c9a2cd98f57aec8a9877b4cf | p1@ENST00000381790 |
| 3.35e-66 | FFCP PHASE1:Hg19::chr15:79501729..79501736,+#_d3218cae8f31c47723ca8d770358fd83 | p1@MIR184 |
| 3.35e-66 | FFCP PHASE2:Hg19::chr15:79501729..79501736,+#_d3218cae8f31c47723ca8d770358fd83 | p1@MIR184 |
| 4.68e-66 | FFCP PHASE1:Hg19::chr3:50191610..50191612,-#_03099cd8614854229393bc82effcf122 | p@chr3:50191610..50191612, - |
| 4.68e-66 | FFCP PHASE2:Hg19::chr3:50191610..50191612,-#_03099cd8614854229393bc82effcf122 | p@chr3:50191610..50191612, - |
| 6.53e-66 | FFCP PHASE1:Hg19::chrX:106142727..106142730,-#_04bf92329c2320b5efed91d6b8414282 | p@chrX:106142727..106142730, - |
| 6.53e-66 | FFCP PHASE1:Hg19::chr1:12416343..12416350,+#_04bf92329c2320b5efed91d6b8414282 | p@chr1:12416343..12416350, + |
| 6.53e-66 | FFCP PHASE2:Hg19::chrX:106142727..106142730,-#_04bf92329c2320b5efed91d6b8414282 | p@chrX:106142727..106142730, - |
| 6.53e-66 | FFCP PHASE2:Hg19::chr1:12416343..12416350,+#_04bf92329c2320b5efed91d6b8414282 | p@chr1:12416343..12416350, + |
| 2.43e-60 | FFCP PHASE1:Hg19::chr5:31235359..31235362,+#_8f744a1572f9c0a1573c28b45f4d38d2 | p@chr5:31235359..31235362, + |
| 2.43e-60 | FFCP PHASE2:Hg19::chr5:31235359..31235362,+#_8f744a1572f9c0a1573c28b45f4d38d2 | p@chr5:31235359..31235362, + |
| 8.17e-60 | FFCP PHASE1:Hg19::chr3:150690508..150690520,-#_51c0bafa0626c2454ca40ff7e5b3fd4e | p1@CLRN1 |
| 8.17e-60 | FFCP PHASE2:Hg19::chr3:150690508..150690520,-#_51c0bafa0626c2454ca40ff7e5b3fd4e | p1@CLRN1 |
| 2.73e-59 | FFCP PHASE2:Hg19::chr8:124692287..124692298,+#_7b9fcb5d9d4db264814a48481059ffa5 | p@chr8:124692287..124692298, + |
| 2.73e-59 | FFCP PHASE1:Hg19::chr8:124692287..124692298,+#_7b9fcb5d9d4db264814a48481059ffa5 | p@chr8:124692287..124692298, + |
| 2.4e-55 | FFCP PHASE1:Hg19::chr3:110888243..110888248,+#_1cc8e92c20613c461a23039da3da244b | p@chr3:110888243..110888248, + |
| 2.4e-55 | FFCP PHASE2:Hg19::chr3:110888243..110888248,+#_1cc8e92c20613c461a23039da3da244b | p@chr3:110888243..110888248, + |
| 2.4e-55 | FFCP PHASE1:Hg19::chr14:61654271..61654282,+#_1cc8e92c20613c461a23039da3da244b | p30@PRKCH |
| 2.4e-55 | FFCP PHASE2:Hg19::chr14:61654271..61654282,+#_1cc8e92c20613c461a23039da3da244b | p30@PRKCH |
| 7.24e-55 | FFCP PHASE1:Hg19::chr14:60975914..60975925,+#_fe42ca179032f607d3007f6a60c62a7b | p5@SIX6 |
| 7.24e-55 | FFCP PHASE2:Hg19::chr14:60975914..60975925,+#_fe42ca179032f607d3007f6a60c62a7b | p5@SIX6 |
| 1.25e-54 | FFCP PHASE1:Hg19::chr14:60981789..60981803,+#_f1212738266c913cd8d55bb8b65c0f99 | p1@ENST00000557618 |
| 1.25e-54 | FFCP PHASE2:Hg19::chr14:60981789..60981803,+#_f1212738266c913cd8d55bb8b65c0f99 | p1@ENST00000557618 |
| 3.76e-54 | FFCP PHASE1:Hg19::chr2:45168617..45168631,-#_6122bde4e2cc7023ce93a35e34474e0e | p1@ENST00000456467 |
| 3.76e-54 | FFCP PHASE2:Hg19::chr2:45168617..45168631,-#_6122bde4e2cc7023ce93a35e34474e0e | p1@ENST00000456467 |
| 1.68e-53 | FFCP PHASE1:Hg19::chr7:115723925..115723935,-#_3de8f84b558709a01dd929f4fec6ffc2 | p@chr7:115723925..115723935, - |
| 1.68e-53 | FFCP PHASE2:Hg19::chr7:115723925..115723935,-#_3de8f84b558709a01dd929f4fec6ffc2 | p@chr7:115723925..115723935, - |
| 2.87e-53 | FFCP PHASE2:Hg19::chr11:31671561..31671580,+#_b5819b019a5bc9d04fb177d0d514c76c | p@chr11:31671561..31671580, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr11:31671561..31671580,+#_b5819b019a5bc9d04fb177d0d514c76c | p@chr11:31671561..31671580, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr4:169623845..169623853,+#_b5819b019a5bc9d04fb177d0d514c76c | p@chr4:169623845..169623853, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr2:35680607..35680613,-#_b5819b019a5bc9d04fb177d0d514c76c | p@chr2:35680607..35680613, - |
| 2.87e-53 | FFCP PHASE2:Hg19::chr4:169623845..169623853,+#_b5819b019a5bc9d04fb177d0d514c76c | p@chr4:169623845..169623853, + |
| 2.87e-53 | FFCP PHASE2:Hg19::chr2:35680607..35680613,-#_b5819b019a5bc9d04fb177d0d514c76c | p@chr2:35680607..35680613, - |
| 6.39e-53 | FFCP PHASE2:Hg19::chr7:131803806..131803815,+#_1708dd5a7a1d050c6b7e8965ae95a47c | p@chr7:131803806..131803815, + |
| 6.39e-53 | FFCP PHASE1:Hg19::chr7:131803806..131803815,+#_1708dd5a7a1d050c6b7e8965ae95a47c | p@chr7:131803806..131803815, + |
| 1.14e-50 | FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_30af77765facb8a059d5be4ba649e477 | p7@PTPRU |
| 1.14e-50 | FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_30af77765facb8a059d5be4ba649e477 | p7@PTPRU |
| 1.89e-50 | FFCP PHASE2:Hg19::chr13:94028319..94028321,+#_85015489d83bc0ae381d8435e19b2fe7 | p@chr13:94028319..94028321, + |
| 1.89e-50 | FFCP PHASE1:Hg19::chr13:94028319..94028321,+#_85015489d83bc0ae381d8435e19b2fe7 | p@chr13:94028319..94028321, + |
| 4.05e-47 | FFCP PHASE1:Hg19::chr2:66670833..66670853,+#_853c92251f669b9ba27f5e05ce36b347 | p@chr2:66670833..66670853, + |
| 4.05e-47 | FFCP PHASE2:Hg19::chr10:103990396..103990405,+#_853c92251f669b9ba27f5e05ce36b347 | p@chr10:103990396..103990405, + |
| 4.05e-47 | FFCP PHASE2:Hg19::chr2:66670833..66670853,+#_853c92251f669b9ba27f5e05ce36b347 | p@chr2:66670833..66670853, + |
| 4.05e-47 | FFCP PHASE2:Hg19::chr11:2973356..2973367,-#_853c92251f669b9ba27f5e05ce36b347 | p11@NAP1L4 |
| 4.05e-47 | FFCP PHASE1:Hg19::chr10:103990396..103990405,+#_853c92251f669b9ba27f5e05ce36b347 | p@chr10:103990396..103990405, + |
| 4.05e-47 | FFCP PHASE1:Hg19::chr11:2973356..2973367,-#_853c92251f669b9ba27f5e05ce36b347 | p11@NAP1L4 |
| 8.84e-47 | FFCP PHASE1:Hg19::chrX:106146562..106146577,-#_98e568181939c7bb7af301c3c6e8af95 | p1@RIPPLY1 |
| 8.84e-47 | FFCP PHASE2:Hg19::chrX:106146562..106146577,-#_98e568181939c7bb7af301c3c6e8af95 | p1@RIPPLY1 |
| 8.84e-47 | FFCP PHASE1:Hg19::chr14:60975644..60975673,+#_98e568181939c7bb7af301c3c6e8af95 | p3@SIX6 |
| 8.84e-47 | FFCP PHASE2:Hg19::chr14:60975644..60975673,+#_98e568181939c7bb7af301c3c6e8af95 | p3@SIX6 |
| 1.21e-46 | FFCP PHASE1:Hg19::chr14:60975871..60975880,+#_cbb6baced4141bde1e586fcd5679e042 | p4@SIX6 |
| 1.21e-46 | FFCP PHASE2:Hg19::chr14:60975871..60975880,+#_cbb6baced4141bde1e586fcd5679e042 | p4@SIX6 |
| 1.21e-46 | FFCP PHASE1:Hg19::chr1:203463245..203463294,+#_cbb6baced4141bde1e586fcd5679e042 | p1@OPTC |
| 1.21e-46 | FFCP PHASE2:Hg19::chr1:203463245..203463294,+#_cbb6baced4141bde1e586fcd5679e042 | p1@OPTC |
| 4.17e-46 | FFCP PHASE1:Hg19::chr13:36050976..36050990,+#_1691dd613e3f44c097b8e62fa59fc032 | p8@NBEA |
| 4.17e-46 | FFCP PHASE2:Hg19::chr13:36050976..36050990,+#_1691dd613e3f44c097b8e62fa59fc032 | p8@NBEA |
