FF:10421-106C7: Difference between revisions

Revision as of 18:55, 9 July 2012

Name:	adult T-cell leukemia cell line:ATN-1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	47 year old adult
sex	male
age	47
cell type	t cell
cell line	ATN-1
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0188
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.636
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0459
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0459
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.0262
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0733
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.082
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.00954
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.408
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.174
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.166
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0459
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.0874
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.388
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.188
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0946
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.0459
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	8.171695e-4
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.0459
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.609
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.0797
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.0459
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0.916
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.384
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10738

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.11
MA0003.1	MA0003.1	0.827
MA0004.1	MA0004.1	0.672
MA0006.1	MA0006.1	0.995
MA0007.1	MA0007.1	0.803
MA0009.1	MA0009.1	0.776
MA0014.1	MA0014.1	0.452
MA0017.1	MA0017.1	0.153
MA0018.2	MA0018.2	0.381
MA0019.1	MA0019.1	0.937
MA0024.1	MA0024.1	2.805e-4
MA0025.1	MA0025.1	0.4
MA0027.1	MA0027.1	0.248
MA0028.1	MA0028.1	5.39683e-7
MA0029.1	MA0029.1	0.0506
MA0030.1	MA0030.1	0.31
MA0031.1	MA0031.1	0.076
MA0035.2	MA0035.2	0.00243
MA0038.1	MA0038.1	1.03722e-4
MA0039.2	MA0039.2	0.00858
MA0040.1	MA0040.1	0.206
MA0041.1	MA0041.1	0.126
MA0042.1	MA0042.1	0.294
MA0043.1	MA0043.1	0.832
MA0046.1	MA0046.1	0.696
MA0047.2	MA0047.2	0.885
MA0048.1	MA0048.1	0.371
MA0050.1	MA0050.1	0.0126
MA0051.1	MA0051.1	0.161
MA0052.1	MA0052.1	0.0718
MA0055.1	MA0055.1	0.0354
MA0057.1	MA0057.1	0.999
MA0058.1	MA0058.1	0.474
MA0059.1	MA0059.1	0.0649
MA0060.1	MA0060.1	2.11829e-42
MA0061.1	MA0061.1	0.00282
MA0062.2	MA0062.2	2.84062e-13
MA0065.2	MA0065.2	0.0622
MA0066.1	MA0066.1	0.841
MA0067.1	MA0067.1	0.668
MA0068.1	MA0068.1	0.408
MA0069.1	MA0069.1	0.377
MA0070.1	MA0070.1	0.288
MA0071.1	MA0071.1	0.555
MA0072.1	MA0072.1	0.0224
MA0073.1	MA0073.1	0.809
MA0074.1	MA0074.1	0.712
MA0076.1	MA0076.1	1.54739e-10
MA0077.1	MA0077.1	0.441
MA0078.1	MA0078.1	0.151
MA0079.2	MA0079.2	0.842
MA0080.2	MA0080.2	2.31901e-5
MA0081.1	MA0081.1	0.038
MA0083.1	MA0083.1	0.705
MA0084.1	MA0084.1	0.395
MA0087.1	MA0087.1	0.417
MA0088.1	MA0088.1	0.00468
MA0090.1	MA0090.1	0.00436
MA0091.1	MA0091.1	0.319
MA0092.1	MA0092.1	0.543
MA0093.1	MA0093.1	0.537
MA0099.2	MA0099.2	0.996
MA0100.1	MA0100.1	0.00741
MA0101.1	MA0101.1	0.0174
MA0102.2	MA0102.2	0.0894
MA0103.1	MA0103.1	0.37
MA0104.2	MA0104.2	0.0231
MA0105.1	MA0105.1	3.91712e-6
MA0106.1	MA0106.1	0.797
MA0107.1	MA0107.1	0.0356
MA0108.2	MA0108.2	0.00659
MA0111.1	MA0111.1	0.332
MA0112.2	MA0112.2	0.206
MA0113.1	MA0113.1	0.571
MA0114.1	MA0114.1	0.115
MA0115.1	MA0115.1	0.298
MA0116.1	MA0116.1	6.36526e-4
MA0117.1	MA0117.1	0.6
MA0119.1	MA0119.1	0.443
MA0122.1	MA0122.1	0.652
MA0124.1	MA0124.1	0.364
MA0125.1	MA0125.1	0.655
MA0131.1	MA0131.1	0.197
MA0135.1	MA0135.1	0.0888
MA0136.1	MA0136.1	9.43551e-9
MA0137.2	MA0137.2	0.279
MA0138.2	MA0138.2	0.399
MA0139.1	MA0139.1	0.149
MA0140.1	MA0140.1	3.11977e-6
MA0141.1	MA0141.1	0.315
MA0142.1	MA0142.1	0.448
MA0143.1	MA0143.1	0.601
MA0144.1	MA0144.1	0.615
MA0145.1	MA0145.1	0.7
MA0146.1	MA0146.1	0.0685
MA0147.1	MA0147.1	0.0236
MA0148.1	MA0148.1	0.717
MA0149.1	MA0149.1	0.0843
MA0150.1	MA0150.1	0.58
MA0152.1	MA0152.1	0.0594
MA0153.1	MA0153.1	0.0184
MA0154.1	MA0154.1	0.0565
MA0155.1	MA0155.1	0.454
MA0156.1	MA0156.1	7.29101e-10
MA0157.1	MA0157.1	0.00129
MA0159.1	MA0159.1	0.281
MA0160.1	MA0160.1	0.243
MA0162.1	MA0162.1	0.623
MA0163.1	MA0163.1	1.05727e-6
MA0164.1	MA0164.1	0.847
MA0258.1	MA0258.1	0.352
MA0259.1	MA0259.1	0.206

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10738

Novel motif	Logo	P-value
1	1	0.0189
10	10	0.0206
100	100	0.52
101	101	0.0431
102	102	0.35
103	103	0.33
104	104	0.609
105	105	0.349
106	106	0.677
107	107	0.584
108	108	0.749
109	109	0.00216
11	11	0.0158
110	110	0.108
111	111	0.454
112	112	0.248
113	113	0.768
114	114	0.598
115	115	0.237
116	116	0.95
117	117	0.0095
118	118	0.873
119	119	0.332
12	12	0.815
120	120	0.422
121	121	0.361
122	122	0.43
123	123	0.0474
124	124	0.0118
125	125	0.405
126	126	0.235
127	127	0.464
128	128	0.504
129	129	0.577
13	13	0.0574
130	130	0.258
131	131	0.491
132	132	0.3
133	133	0.275
134	134	0.721
135	135	0.96
136	136	0.178
137	137	0.784
138	138	0.888
139	139	0.413
14	14	0.653
140	140	0.233
141	141	0.711
142	142	0.739
143	143	0.039
144	144	0.854
145	145	0.425
146	146	0.283
147	147	0.156
148	148	0.271
149	149	0.592
15	15	0.106
150	150	0.31
151	151	0.832
152	152	0.223
153	153	0.436
154	154	0.888
155	155	0.205
156	156	0.446
157	157	0.935
158	158	0.299
159	159	0.583
16	16	0.862
160	160	0.747
161	161	0.401
162	162	0.715
163	163	0.901
164	164	0.0391
165	165	0.786
166	166	0.211
167	167	0.188
168	168	0.765
169	169	0.281
17	17	0.537
18	18	0.543
19	19	0.891
2	2	0.629
20	20	0.622
21	21	0.555
22	22	0.911
23	23	0.545
24	24	0.315
25	25	0.205
26	26	0.0392
27	27	0.64
28	28	0.317
29	29	0.0476
3	3	0.0822
30	30	0.193
31	31	0.736
32	32	0.432
33	33	0.351
34	34	0.515
35	35	0.464
36	36	0.0236
37	37	0.29
38	38	0.454
39	39	0.909
4	4	0.0128
40	40	0.0514
41	41	0.784
42	42	0.0221
43	43	0.202
44	44	0.561
45	45	0.982
46	46	0.199
47	47	0.0132
48	48	0.062
49	49	0.0141
5	5	0.506
50	50	0.609
51	51	0.784
52	52	0.0585
53	53	0.154
54	54	0.904
55	55	0.751
56	56	0.394
57	57	0.343
58	58	0.164
59	59	0.864
6	6	0.753
60	60	0.987
61	61	0.21
62	62	0.162
63	63	0.744
64	64	0.197
65	65	0.672
66	66	1.20976e-9
67	67	0.46
68	68	0.415
69	69	0.718
7	7	0.0941
70	70	0.617
71	71	0.0364
72	72	0.763
73	73	0.735
74	74	0.761
75	75	0.0219
76	76	0.764
77	77	0.903
78	78	0.276
79	79	0.34
8	8	0.519
80	80	0.661
81	81	0.764
82	82	0.849
83	83	0.00519
84	84	0.666
85	85	0.847
86	86	0.0957
87	87	0.04
88	88	0.82
89	89	0.233
9	9	0.992
90	90	0.129
91	91	0.104
92	92	0.96
93	93	0.812
94	94	0.193
95	95	0.0102
96	96	0.191
97	97	0.263
98	98	0.674
99	99	0.638

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10738

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0104049 adult T-cell lymphoma cell line sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000084 (T cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
0060058 (lymphoma)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0100104 (lymphoma cell line sample)
0103212 (T-lymphoma cell line sample)
0104049 (adult T-cell lymphoma cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr6:391743..391759,+!p1@IRF4!2.87!746.89!IRF4;;chr1:201979703..201979721,+!p2@ELF3!1.91!81.02!ELF3;;chr19:36204309..36204335,+!p1@ZBTB32!1.90!78.34!ZBTB32;;chr9:77112244..77112262,+!p1@RORB!1.84!76.23!RORB;;chr1:25256756..25256774,-!p1@RUNX3!1.79!109.77!RUNX3;;chr10:8096631..8096660,+!p1@GATA3!1.76!67.20!GATA3;;chr1:23857698..23857733,-!p1@E2F2!1.70!87.82!E2F2;;chr19:22193731..22193751,-!p1@ZNF208!1.69!47.59!ZNF208;;chr2:231090433..231090469,+!p1@SP140!1.62!40.90!SP140;;chr4:185395590..185395627,-!p3@IRF2!1.51!38.34!IRF2;;chr6:135502501..135502546,+!p1@MYB!1.51!37.78!MYB;;chr2:231090471..231090504,+!p2@SP140!1.50!30.54!SP140;;chr7:63505799..63505904,+!p1@ZNF727!1.48!28.86!ZNF727;;chr6:106534192..106534224,+!p1@PRDM1!1.46!77.12!PRDM1;;chr1:151319654..151319698,-!p2@RFX5!1.46!59.96!RFX5;;chr1:201979743..201979762,+!p1@ELF3!1.46!27.97!ELF3;;chr2:68592406..68592424,+!p1@PLEK!1.44!26.41!PLEK;;chr6:106534230..106534254,+!p2@PRDM1!1.41!60.74!PRDM1;;chr19:4153613..4153652,+!p1@CREB3L3!1.40!24.18!CREB3L3;;chr17:45810594..45810608,+!p1@TBX21!1.38!23.07!TBX21;;chr13:36788658..36788703,-!p2@CCDC169-SOHLH2,p2@SOHLH2!1.27!17.61!SOHLH2;;chr7:50343634..50343717,+!p2@IKZF1!1.23!16.05!IKZF1;;chr19:22235279..22235301,+!p1@ZNF257!1.22!29.09!ZNF257;;chr10:8096772..8096787,+!p2@GATA3!1.22!18.39!GATA3;;chr7:50348268..50348366,+!p4@IKZF1!1.22!15.60!IKZF1;;chr3:189349162..189349207,+!p2@TP63!1.19!14.60!TP63;;chr7:50344289..50344323,+!p1@IKZF1!1.18!14.15!IKZF1;;chr1:212873267..212873332,-!p1@BATF3!1.16!18.17!BATF3;;chr19:16435625..16435682,+!p1@KLF2!1.15!418.02!KLF2;;chr19:33793430..33793447,-!p1@CEBPA!1.15!54.83!CEBPA;;chr7:50344251..50344288,+!p3@IKZF1!1.15!13.26!IKZF1;;chr9:77112225..77112238,+!p2@RORB!1.14!12.93!RORB;;chr10:64134045..64134083,+!p3@ZNF365!1.14!12.82!ZNF365;;chr14:61116183..61116208,-!p1@SIX1!1.13!47.81!SIX1;;chr7:148581327..148581347,-!p2@EZH2!1.12!41.23!EZH2;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!1.12!12.04!ZNF676;;chr10:104155480..104155534,+!p2@NFKB2!1.11!77.23!NFKB2;;chr2:231090344..231090361,-!p3@SP110!1.11!11.81!SP110;;chr19:22966893..22966924,-!p2@ZNF99!1.10!11.59!ZNF99;;chr18:77155922..77155939,+!p1@NFATC1!1.09!31.32!NFATC1;;chr19:22817119..22817145,+!p1@ZNF492!1.09!19.06!ZNF492;;chr7:26191809..26191890,+!p1@NFE2L3!1.08!54.94!NFE2L3;;chr19:22605136..22605154,-!p1@ZNF98!1.04!10.03!ZNF98;;chr19:22966925..22966958,-!p1@ZNF99!1.03!9.70!ZNF99;;chr5:176738887..176738934,-!p1@MXD3!1.02!65.08!MXD3;;chr10:104154246..104154347,+!p3@NFKB2!1.02!59.62!NFKB2;;chr2:68592394..68592405,+!p2@PLEK!1.02!9.36!PLEK;;chr17:17726907..17726958,-!p2@SREBF1!1.01!58.17!SREBF1;;chr8:72756063..72756125,-!p1@MSC!1.00!18.61!MSC;;chr6:135502408..135502459,+!p2@MYB!1.00!10.59!MYB;;chr1:44679370..44679422,+!p3@DMAP1!0.99!11.59!DMAP1;;chr7:35293685..35293718,-!p1@TBX20!0.99!8.69!TBX20;;chr16:29819558..29819572,+!p28@MAZ!0.99!8.69!MAZ;;chr17:46703942..46703964,-!p4@HOXB9!0.98!8.58!HOXB9;;chr12:48298785..48298828,-!p1@VDR!0.96!44.58!VDR;;chr4:185395633..185395651,-!p2@IRF2!0.96!13.37!IRF2;;chr12:56415246..56415286,+!p2@IKZF4!0.96!8.14!IKZF4;;chr19:22469236..22469266,+!p1@ZNF729!0.96!8.02!ZNF729;;chr2:97202480..97202499,+!p1@ARID5A!0.93!78.57!ARID5A;;chr1:212873084..212873137,-!p2@BATF3!0.93!7.47!BATF3;;chr8:72756667..72756736,-!p2@MSC!0.92!11.59!MSC;;chr1:23857325..23857416,-!p2@E2F2!0.92!8.58!E2F2;;chr20:56195474..56195506,-!p1@ZBP1!0.92!7.24!ZBP1;;chr4:299227..299272,-!p1@ZNF732!0.92!7.24!ZNF732;;chr19:22605097..22605121,-!p2@ZNF98!0.92!7.24!ZNF98;;chr7:148581360..148581425,-!p1@EZH2!0.91!36.55!EZH2;;chr14:75988771..75988826,+!p1@BATF!0.90!9.47!BATF;;chr10:64134120..64134183,+!p1@ZNF365!0.90!8.47!ZNF365;;chr7:64838786..64838809,+!p2@ZNF92!0.89!40.90!ZNF92;;chr4:81104895..81104920,+!p2@PRDM8!0.89!10.36!PRDM8;;chr10:8100691..8100732,+!p5@GATA3!0.89!6.80!GATA3;;chr10:8095593..8095625,+!p3@GATA3!0.88!7.80!GATA3;;chr17:41739283..41739297,-!p1@MEOX1!0.88!6.58!MEOX1;;chr17:46703212..46703238,-!p2@HOXB9!0.88!6.58!HOXB9;;chr4:53206..53260,+!p1@ZNF595,p1@ZNF718!0.87!64.53!ZNF595;;chr19:12405606..12405629,-!p2@ZNF44!0.87!13.04!ZNF44;;chr17:46703687..46703740,-!p1@HOXB9!0.87!6.46!HOXB9;;chr9:14308004..14308041,-!p14@NFIB!0.87!6.46!NFIB;;chr16:31885093..31885165,+!p1@ZNF267!0.86!100.97!ZNF267;;chr17:41623692..41623715,-!p1@ETV4!0.85!27.30!ETV4;;chr8:72756637..72756664,-!p3@MSC!0.85!6.91!MSC;;chr1:92951607..92951661,-!p1@GFI1!0.85!6.02!GFI1;;chr2:42721205..42721307,+!p4@MTA3!0.85!6.02!MTA3;;chr19:8578683..8578750,-!p2@ZNF414!0.84!13.26!ZNF414;;chr10:104155455..104155479,+!p1@NFKB2!0.83!91.50!NFKB2;;chr19:23433144..23433204,-!p1@ZNF724P!0.83!27.30!ZNF724P;;chr4:4861385..4861398,+!p1@MSX1!0.83!18.28!MSX1;;chr3:5021113..5021180,+!p1@BHLHE40!0.82!422.15!BHLHE40;;chrY:21906594..21906622,-!p1@KDM5D!0.81!5.46!KDM5D;;chr8:71053850..71053871,-!p22@NCOA2!0.81!5.46!NCOA2;;chr11:128563948..128564003,+!p1@FLI1!0.80!69.43!FLI1;;chr10:35484053..35484076,+!p1@CREM!0.80!13.93!CREM;;chr14:61116168..61116180,-!p2@SIX1!0.80!6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hr19:38085768..38085821,+!p1@ZNF540!0.18!1.23!ZNF540;;chr3:23986876..23986885,+!p4@NR1D2!0.18!1.11!NR1D2;;chr3:48282607..48282618,+!p3@ZNF589!0.18!1.00!ZNF589;;chr4:1873216..1873238,+!p5@WHSC1!0.18!1.00!WHSC1;;chr15:37392593..37392607,-!p13@MEIS2!0.18!0.78!MEIS2;;chr18:52989001..52989030,-!p10@TCF4!0.18!0.67!TCF4;;chr12:53847004..53847008,+!p13@PCBP2!0.18!0.67!PCBP2;;chr2:74374995..74375055,-!p1@BOLA3!0.17!59.29!BOLA3;;chr1:90460661..90460745,+!p1@ZNF326!0.17!37.67!ZNF326;;chr18:45457192..45457278,-!p1@SMAD2!0.17!22.18!SMAD2;;chr1:91487553..91487612,-!p1@ZNF644!0.17!21.84!ZNF644;;chr11:3400340..3400422,-!p1@ZNF195!0.17!20.39!ZNF195;;chr2:174828545..174828644,-!p1@SP3!0.17!19.95!SP3;;chr19:52772832..52772861,+!p1@ZNF766!0.17!12.93!ZNF766;;chr15:77197655..77197716,-!p1@SCAPER!0.17!11.48!SCAPER;;chr4:106068026..106068084,+!p1@TET2!0.17!11.26!TET2;;chr4:2263861..2263883,-!p2@MXD4!0.17!7.24!MXD4;;chr10:97889784..97889827,+!p1@ZNF518A!0.17!5.80!ZNF518A;;chr10:96122645..96122675,-!p2@NOC3L!0.17!5.57!NOC3L;;chr2:208394817..208394834,+!p3@CREB1!0.17!4.68!CREB1;;chr3:150126706..150126754,+!p5@TSC22D2!0.17!3.34!TSC22D2;;chr21:34144115..34144138,-!p2@GCFC1!0.17!3.12!GCFC1;;chr3:52001426..52001447,-!p3@PCBP4!0.17!3.01!PCBP4;;chr19:7069426..7069482,+!p2@ZNF557!0.17!2.90!ZNF557;;chr1:42800848..42800859,-!p2@FOXJ3!0.17!2.90!FOXJ3;;chr1:41174988..41175047,+!p4@NFYC!0.17!2.79!NFYC;;chr19:37178482..37178520,+!p1@ZNF567!0.17!2.79!ZNF567;;chr5:138647473..138647476,+!p6@MATR3!0.17!2.56!MATR3;;chr1:61548069..61548102,+!p3@NFIA!0.17!2.45!NFIA;;chr12:72058060..72058101,+!p5@THAP2!0.17!2.45!THAP2;;chr10:43932296..43932360,+!p1@ZNF487P!0.17!2.01!ZNF487P;;chr7:64126535..64126559,+!p2@ZNF107!0.17!2.01!ZNF107;;chr19:925727..925784,+!p3@ARID3A!0.17!2.01!ARID3A;;chr5:142784101..142784130,-!p4@NR3C1!0.17!1.67!NR3C1;;chr6:31869828..31869880,-!p1@ZBTB12!0.17!1.67!ZBTB12;;chr19:20150268..20150298,-!p2@ZNF682!0.17!1.67!ZNF682;;chr3:101395999..101396010,-!p3@ZBTB11!0.17!1.56!ZBTB11;;chr12:56575310..56575344,-!p3@SMARCC2!0.17!1.34!SMARCC2;;chr1:8763510..8763538,-!p15@RERE!0.17!1.34!RERE;;chr1:247095162..247095173,-!p3@AHCTF1!0.17!1.23!AHCTF1;;chr11:16759983..16760029,-!p2@SOX6!0.17!1.23!SOX6;;chr2:214016496..214016544,-!p5@IKZF2!0.17!1.00!IKZF2;;chr1:211432872..211432883,+!p7@RCOR3!0.17!0.89!RCOR3;;chr7:152133109..152133116,-!p2@MLL3!0.17!0.89!MLL3;;chr11:130184828..130184839,-!p7@ZBTB44!0.17!0.78!ZBTB44;;chr15:37392576..37392589,-!p12@MEIS2!0.17!0.78!MEIS2;;chr17:42295777..42295816,-!p7@UBTF!0.17!0.78!UBTF;;chr4:81104985..81105005,+!p4@PRDM8!0.17!0.78!PRDM8;;chr12:27485733..27485742,+!p5@ARNTL2!0.17!0.67!ARNTL2;;chr16:30407021..30407061,+!p3@ZNF48!0.17!0.67!ZNF48;;chr20:44600785..44600794,-!p7@ZNF335!0.17!0.67!ZNF335;;chr12:53835508..53835533,+!p1@PRR13,p2@PCBP2!0.16!98.85!PCBP2;;chr7:101459263..101459310,+!p1@CUX1!0.16!76.78!CUX1;;chr1:168195229..168195294,+!p1@SFT2D2,p1@TBX19!0.16!57.84!TBX19;;chr13:20357063..20357105,-!p1@PSPC1!0.16!42.01!PSPC1;;chr19:36705998..36706021,+!p2@ZNF146!0.16!18.28!ZNF146;;chr1:246729483..246729538,-!p2@TFB2M!0.16!11.81!TFB2M;;chr14:58765217..58765301,+!p1@ARID4A!0.16!11.14!ARID4A;;chr10:21823128..21823216,+!p1@MLLT10!0.16!11.03!MLLT10;;chr12:51566849..51566927,-!p1@TFCP2!0.16!10.36!TFCP2;;chr7:44925044..44925156,-!p1@PURB!0.16!9.81!PURB;;chr16:69419749..69419786,-!p2@TERF2!0.16!6.69!TERF2;;chr19:58662139..58662182,-!p1@ZNF329!0.16!5.57!ZNF329;;chr16:69419794..69419830,-!p3@TERF2!0.16!5.46!TERF2;;chr6:28092375..28092412,+!p1@ZSCAN16!0.16!4.68!ZSCAN16;;chr17:11900745..11900804,-!p1@ZNF18!0.16!4.23!ZNF18;;chr16:30569678..30569720,-!p1@ZNF764!0.16!3.90!ZNF764;;chr19:926001..926046,+!p1@ARID3A!0.16!3.79!ARID3A;;chr16:89787402..89787430,+!p2@ZNF276!0.16!3.34!ZNF276;;chr19:42636586..42636607,-!p1@POU2F2!0.16!2.79!POU2F2;;
+|ffid_belonging_in_development=CL:0000134,CL:0000051
 |fonse_cell_line=FF:0100104,FF:0101035
 |fonse_cell_line_closure=FF:0100104,FF:0101035

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FF:10421-106C7: Difference between revisions

From FANTOM5_SSTAR

Revision as of 18:55, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0