FFCP PHASE1:Hg19::chr19:55942972..55942977,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.70e-75!57;UBERON:0005068!8.70e-75!57;UBERON:0006241!8.70e-75!57;UBERON:0007135!8.70e-75!57;UBERON:0001893!1.04e-73!34;UBERON:0002791!2.67e-69!33;UBERON:0002020!1.77e-67!34;UBERON:0003528!1.77e-67!34;UBERON:0002780!3.61e-66!41;UBERON:0001890!3.61e-66!41;UBERON:0006240!3.61e-66!41;UBERON:0001869!4.12e-65!32;UBERON:0003080!1.66e-64!42;UBERON:0002616!3.97e-62!59;UBERON:0000955!1.35e-59!69;UBERON:0006238!1.35e-59!69;UBERON:0001017!5.42e-57!82;UBERON:0002619!1.45e-54!22;UBERON:0005743!4.14e-54!86;UBERON:0002346!2.54e-52!90;UBERON:0000073!1.72e-48!94;UBERON:0001016!1.72e-48!94;UBERON:0000956!7.35e-48!25;UBERON:0000203!7.35e-48!25;UBERON:0003075!8.66e-48!86;UBERON:0007284!8.66e-48!86;UBERON:0001950!1.57e-45!20;UBERON:0003056!4.14e-43!61;UBERON:0007023!2.07e-34!115;UBERON:0000033!1.38e-33!123;UBERON:0000153!9.36e-32!129;UBERON:0007811!9.36e-32!129;UBERON:0000924!1.50e-27!173;UBERON:0006601!1.50e-27!173;UBERON:0001872!6.48e-26!5;UBERON:0004121!1.66e-24!169;UBERON:0000200!4.63e-22!6;UBERON:0002420!9.67e-21!9;UBERON:0007245!9.67e-21!9;UBERON:0010009!9.67e-21!9;UBERON:0010011!9.67e-21!9;UBERON:0000454!9.67e-21!9;UBERON:0002308!1.07e-20!9;UBERON:0000125!1.07e-20!9;UBERON:0009663!8.41e-19!7;UBERON:0000025!7.93e-18!194;UBERON:0000349!3.07e-17!5;UBERON:0002771!4.99e-17!3;UBERON:0001871!6.86e-17!7;UBERON:0004111!3.93e-13!241;UBERON:0000369!1.73e-12!4;UBERON:0002435!1.73e-12!4;UBERON:0000204!1.73e-12!4;UBERON:0010082!1.73e-12!4;UBERON:0003076!4.32e-12!15;UBERON:0003057!4.32e-12!15;UBERON:0001954!8.37e-12!2;UBERON:0003022!8.37e-12!2;UBERON:0002421!8.37e-12!2;UBERON:0002600!8.37e-12!2;UBERON:0000477!4.58e-11!286;UBERON:0002298!9.16e-11!8;UBERON:0000064!2.14e-10!219;UBERON:0000483!7.29e-09!309;UBERON:0000475!8.78e-09!365;UBERON:0000119!1.02e-08!312;UBERON:0006331!4.09e-08!3;UBERON:0005383!4.09e-08!3;UBERON:0005382!4.09e-08!3;UBERON:0002240!4.23e-08!3;UBERON:0001896!7.14e-08!3;UBERON:0005290!7.14e-08!3;UBERON:0010096!7.14e-08!3;UBERON:0004733!4.18e-07!12;UBERON:0002028!4.18e-07!12;UBERON:0007277!4.18e-07!12;UBERON:0001874!6.59e-07!1;UBERON:0002038!8.67e-07!1;UBERON:0009661!8.67e-07!1 | |ontology_enrichment_uberon=UBERON:0001049!8.70e-75!57;UBERON:0005068!8.70e-75!57;UBERON:0006241!8.70e-75!57;UBERON:0007135!8.70e-75!57;UBERON:0001893!1.04e-73!34;UBERON:0002791!2.67e-69!33;UBERON:0002020!1.77e-67!34;UBERON:0003528!1.77e-67!34;UBERON:0002780!3.61e-66!41;UBERON:0001890!3.61e-66!41;UBERON:0006240!3.61e-66!41;UBERON:0001869!4.12e-65!32;UBERON:0003080!1.66e-64!42;UBERON:0002616!3.97e-62!59;UBERON:0000955!1.35e-59!69;UBERON:0006238!1.35e-59!69;UBERON:0001017!5.42e-57!82;UBERON:0002619!1.45e-54!22;UBERON:0005743!4.14e-54!86;UBERON:0002346!2.54e-52!90;UBERON:0000073!1.72e-48!94;UBERON:0001016!1.72e-48!94;UBERON:0000956!7.35e-48!25;UBERON:0000203!7.35e-48!25;UBERON:0003075!8.66e-48!86;UBERON:0007284!8.66e-48!86;UBERON:0001950!1.57e-45!20;UBERON:0003056!4.14e-43!61;UBERON:0007023!2.07e-34!115;UBERON:0000033!1.38e-33!123;UBERON:0000153!9.36e-32!129;UBERON:0007811!9.36e-32!129;UBERON:0000924!1.50e-27!173;UBERON:0006601!1.50e-27!173;UBERON:0001872!6.48e-26!5;UBERON:0004121!1.66e-24!169;UBERON:0000200!4.63e-22!6;UBERON:0002420!9.67e-21!9;UBERON:0007245!9.67e-21!9;UBERON:0010009!9.67e-21!9;UBERON:0010011!9.67e-21!9;UBERON:0000454!9.67e-21!9;UBERON:0002308!1.07e-20!9;UBERON:0000125!1.07e-20!9;UBERON:0009663!8.41e-19!7;UBERON:0000025!7.93e-18!194;UBERON:0000349!3.07e-17!5;UBERON:0002771!4.99e-17!3;UBERON:0001871!6.86e-17!7;UBERON:0004111!3.93e-13!241;UBERON:0000369!1.73e-12!4;UBERON:0002435!1.73e-12!4;UBERON:0000204!1.73e-12!4;UBERON:0010082!1.73e-12!4;UBERON:0003076!4.32e-12!15;UBERON:0003057!4.32e-12!15;UBERON:0001954!8.37e-12!2;UBERON:0003022!8.37e-12!2;UBERON:0002421!8.37e-12!2;UBERON:0002600!8.37e-12!2;UBERON:0000477!4.58e-11!286;UBERON:0002298!9.16e-11!8;UBERON:0000064!2.14e-10!219;UBERON:0000483!7.29e-09!309;UBERON:0000475!8.78e-09!365;UBERON:0000119!1.02e-08!312;UBERON:0006331!4.09e-08!3;UBERON:0005383!4.09e-08!3;UBERON:0005382!4.09e-08!3;UBERON:0002240!4.23e-08!3;UBERON:0001896!7.14e-08!3;UBERON:0005290!7.14e-08!3;UBERON:0010096!7.14e-08!3;UBERON:0004733!4.18e-07!12;UBERON:0002028!4.18e-07!12;UBERON:0007277!4.18e-07!12;UBERON:0001874!6.59e-07!1;UBERON:0002038!8.67e-07!1;UBERON:0009661!8.67e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002771;1.55e-98;2!UBERON:0000200;4.27e-34;6!UBERON:0001871;1.78e-29;6!UBERON:0001950;6.74e-11;20!UBERON:0002619;4.42e-10;22!UBERON:0000956;4.34e-09;25!UBERON:0000203;4.34e-09;25!UBERON:0001893;4.53e-08;34!UBERON:0003528;2.32e-07;34!UBERON:0002791;2.32e-07;32!UBERON:0002020;2.32e-07;34!UBERON:0001869;2.32e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002771;1.55e-98;2!UBERON:0000200;4.27e-34;6!UBERON:0001871;1.78e-29;6!UBERON:0001950;6.74e-11;20!UBERON:0002619;4.42e-10;22!UBERON:0000956;4.34e-09;25!UBERON:0000203;4.34e-09;25!UBERON:0001893;4.53e-08;34!UBERON:0003528;2.32e-07;34!UBERON:0002791;2.32e-07;32!UBERON:0002020;2.32e-07;34!UBERON:0001869;2.32e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,1.55e-98,2;UBERON:0000200,4.27e-34,6;UBERON:0001871,1.78e-29,6;UBERON:0001950,6.74e-11,20;UBERON:0002619,4.42e-10,22;UBERON:0000956,4.34e-09,25;UBERON:0000203,4.34e-09,25;UBERON:0002791,1.82e-07,32;UBERON:0001869,1.82e-07,32;UBERON:0003528,4.03e-07,34;UBERON:0002020,4.03e-07,34;UBERON:0001893,4.03e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0.241192877250816,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53876168215693,0.500763722825999,0.573409195690071,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.413373593002368,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0.241192877250816,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53876168215693,0.500763722825999,0.573409195690071,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.413373593002368,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@SHISA7 | |short_description=p8@SHISA7 | ||
}} | }} |
Revision as of 13:38, 19 November 2012
Short description: | p8@SHISA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SHISA7_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -214bp_to_AK094959_5end |
EntrezGene: | SHISA7 |
HGNC: | 35409 |
UniProt: | Q8N9E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 1.55e-98 | 2 |
gyrus | 4.27e-34 | 6 |
temporal lobe | 1.78e-29 | 6 |
neocortex | 6.74e-11 | 20 |
regional part of cerebral cortex | 4.42e-10 | 22 |
cerebral cortex | 4.34e-09 | 25 |
pallium | 4.34e-09 | 25 |
regional part of telencephalon | 1.82e-07 | 32 |
cerebral hemisphere | 1.82e-07 | 32 |
brain grey matter | 4.03e-07 | 34 |
gray matter | 4.03e-07 | 34 |
telencephalon | 4.03e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.