Personal tools

Coexpression cluster:C1741: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 3: Line 3:
|full_id=C1741_Fibroblast_Synoviocyte_sacrococcigeal_Preadipocyte_tenocyte_Adipocyte_mesenchymal
|full_id=C1741_Fibroblast_Synoviocyte_sacrococcigeal_Preadipocyte_tenocyte_Adipocyte_mesenchymal
|id=C1741
|id=C1741
|ontology_enrichment_celltype=CL:0000055!1.43e-25!180;CL:0000057!4.88e-19!75;CL:0000680!4.08e-16!57;CL:0000056!4.08e-16!57;CL:0000355!4.08e-16!57;CL:0000187!2.85e-15!54;CL:0000183!8.94e-14!59;CL:0000393!1.61e-12!60;CL:0000211!1.61e-12!60;CL:0000192!1.47e-11!42;CL:0000514!1.47e-11!42;CL:0002620!6.45e-10!23;CL:0000136!7.37e-09!15;CL:0002334!1.70e-08!12;CL:0000359!1.22e-07!32
|ontology_enrichment_celltype=CL:0000057!8.38e-19!76;CL:0000680!6.88e-14!58;CL:0000056!6.88e-14!58;CL:0000355!6.88e-14!58;CL:0000187!6.79e-13!55;CL:0002620!1.03e-11!23;CL:0000183!3.77e-11!59;CL:0000393!2.23e-10!61;CL:0000211!2.23e-10!61;CL:0002334!3.28e-10!12;CL:0000192!3.80e-09!43;CL:0000514!3.80e-09!43;CL:0000048!2.39e-08!427;CL:0000136!2.99e-08!15;CL:0000723!4.95e-08!433;CL:0000034!3.21e-07!441
|ontology_enrichment_disease=DOID:2394!3.52e-08!14
|ontology_enrichment_disease=DOID:2394!1.82e-10!14
|ontology_enrichment_uberon=UBERON:0000914!1.56e-20!83;UBERON:0002329!1.56e-20!83;UBERON:0003077!1.56e-20!83;UBERON:0003059!1.56e-20!83;UBERON:0007282!1.56e-20!83;UBERON:0009618!1.56e-20!83;UBERON:0007285!1.56e-20!83;UBERON:0004290!5.18e-19!70;UBERON:0002385!1.05e-17!63;UBERON:0001015!1.05e-17!63;UBERON:0000383!1.05e-17!63;UBERON:0001134!5.12e-17!61;UBERON:0002036!5.12e-17!61;UBERON:0003082!5.12e-17!61;UBERON:0000486!6.31e-15!82;UBERON:0000475!1.70e-12!365;UBERON:0005256!1.86e-11!143;UBERON:0003102!6.35e-11!95;UBERON:0002199!1.41e-10!45;UBERON:0002416!1.41e-10!45;UBERON:0002100!1.41e-09!216;UBERON:0002097!1.11e-08!40;UBERON:0007023!2.03e-08!115;UBERON:0001013!3.58e-08!14;UBERON:0007100!4.38e-08!27;UBERON:0000948!1.59e-07!24;UBERON:0005498!1.59e-07!24;UBERON:0004140!1.59e-07!24;UBERON:0009881!1.59e-07!24;UBERON:0004141!1.59e-07!24;UBERON:0003084!1.59e-07!24;UBERON:0007005!1.59e-07!24;UBERON:0004139!1.59e-07!24;UBERON:0004291!1.59e-07!24;UBERON:0000481!2.17e-07!347;UBERON:0000468!2.24e-07!659;UBERON:0004872!2.87e-07!84;UBERON:0001135!4.00e-07!15
|ontology_enrichment_uberon=UBERON:0002329!7.69e-15!71;UBERON:0003059!7.69e-15!71;UBERON:0007282!7.69e-15!71;UBERON:0004290!7.69e-15!71;UBERON:0009618!7.69e-15!71;UBERON:0003077!2.09e-14!72;UBERON:0007285!2.09e-14!72;UBERON:0002385!3.00e-14!64;UBERON:0001015!3.00e-14!64;UBERON:0000383!3.00e-14!64;UBERON:0007524!5.49e-14!73;UBERON:0001134!1.58e-13!62;UBERON:0002036!1.58e-13!62;UBERON:0003082!1.58e-13!62;UBERON:0000486!2.89e-12!83;UBERON:0007503!4.46e-12!78;UBERON:0005256!2.15e-10!122;UBERON:0002199!3.25e-09!46;UBERON:0002416!3.25e-09!46;UBERON:0003102!4.78e-09!99;UBERON:0001135!4.95e-09!15;UBERON:0002100!6.51e-09!199;UBERON:0002097!1.40e-08!41;UBERON:0000475!4.99e-08!264;UBERON:0003104!5.40e-08!160;UBERON:0009142!5.40e-08!160;UBERON:0000926!2.18e-07!315;UBERON:0004120!2.18e-07!315;UBERON:0006603!2.18e-07!315;UBERON:0000948!3.56e-07!24;UBERON:0005498!3.56e-07!24;UBERON:0004140!3.56e-07!24;UBERON:0009881!3.56e-07!24;UBERON:0004141!3.56e-07!24;UBERON:0003084!3.56e-07!24;UBERON:0007005!3.56e-07!24;UBERON:0004139!3.56e-07!24;UBERON:0004291!3.56e-07!24;UBERON:0003688!4.77e-07!6;UBERON:0002358!4.77e-07!6;UBERON:0003684!4.77e-07!6;UBERON:0001178!4.77e-07!6;UBERON:0007100!8.71e-07!27
|tfbs_overrepresentation=3.87588e-07,0.0958562,0.351299,0.078254,2.6547e-06,0.43203,0.0706464,0.224712,0.0539364,0.000915096,0.0265483,0.0685476,0.294377,0.0015934,9.26734e-06,0.101024,0.00224213,0.000749269,4.69153e-08,0.173528,1.84424e-06,0.211047,0.13286,0.153106,0.00238901,0.332688,0.324018,0.146582,0.227906,2.60524e-05,0.31768,0.00117848,0.0298713,0.0586706,0.000231035,0.000475197,0.856615,0.00255175,0.192426,0.108683,0.0127826,0.0406818,0.00219687,0.0459718,9.28587e-11,0.0596699,0.0625547,2.61868e-05,0.178503,7.54537e-05,0.243359,0.0886583,0.00678248,0.150136,0.00638392,0.0632035,0.172598,0.328738,0.127101,0.000932755,0.00119897,0.00267514,0.00101619,0.00794097,0.000127124,0.00352005,0.0064565,0.0980005,0.0101867,8.55704e-07,0.188991,0.110232,0.0108963,7.09337e-05,0.012429,0.0283664,1.00164e-06,0.0717582,0.0613084,0.0120583,0.154245,3.64601e-07,0.00249658,2.44539e-06,0.0206187,0.0852575,0.104918,0.323505,0.207544,0.102375,1.3607e-08,0.0812726,0.153861,0.0777027,0.0100263,0.184264,0.016992,0.242703,0.0118178,0.00221844,0.0939617,6.49978e-09,0.225088,0.0610111,0.0648403,0.0672793,0.00618461,0.0326652,0.228612,0.097251,0.000406704,0.00159912,0.00268249,0.0293017,3.61846e-05,0.0556189,0.000573215,0.00442914,0.220791,0.13579,0.262107,0.331577,0.000136665,0.000497828,0.000849667,0.277102,0.146529,0.0245339,0.136609,0.214614,0.0973103,0.121587,0.0935301,0.0376876,8.78439e-05,0.016024,0.105753,0.0905147,0.0544577,0.0065834,0.037671,4.20565e-06,0.000642942,5.5637e-07,0.0672699,0.112838,0.0134071,0.00975686,0.0640569,0.193163,1.44588e-07,0.00237488,1.00736e-10,0.0439093,0.070163,0.188135,2.72528e-07,0.350865,0.0846706,0.0555742,8.64038e-05,0.000683905,0.186743,8.98322e-06,0.000229552,0.183121,0.065826,0.00164738,1.20019e-08,0.463935,0.281162,0.000127325,0.0214914,0.0885874,0.00879177,0.145577,0.22277,0.284267,0.27935,0.00175647,0.00322219,0.195671,1.59931e-05,6.21348e-05,0.11983,0.190123,0.000410696,0.0660586,0.134265,0.040954,0.172119,0.00532306,7.99649e-05,0.351465,0.18064,0.0772176,3.43833e-07,0.0984435,0.00024302,0.0164904,0.0109611,0.0986228,0.0508565,0.0989516,0.21691,0.00175814,0.00219974,0.0314403,0.000674656,0.0432208,0.0752697,0.167805,0.0200942,0.00114296,0.00387007,0.265567,0.0367027,0.162511,0.00547179,0.165687,0.0275026,0.000157294,0.0331894,0.0353118,2.87011e-16,0.00161784,0.220536,0.0101633,0.00504063,0.000168335,0.167847,0.000196472,0.0687568,0.124225,0.1547,0.0119318,0.00308114,1.56127e-05,7.47433e-07,0.331711,0.285222,0.511,0.0132931,0.134615,0.00124993,0.000123993,0.00914056,0.179065,1.66439e-06,0.00127434,0.00323503,3.372e-09,0.00518946,0.000745286,3.18401e-05,0.000233772,0.172268,0.00669013,0.00667088,0.180042,0.101058,0.000341972,0.0363385,0.204241,0.0568578,0.00904204,1.47483e-05,0.148683,0.188945,0.00785145,0.000252431,0.103245,0.387442,0.627158,0.000512128,0.0626022,0.2074,0.000145041,0.345431,0.0451674,6.66886e-05,2.45662e-07,0.073513,0.75925,0.493893,0.230921,0.396701,0.0180957,0.0083276,0.0247857,2.94566e-06,0.000643343,0.0533299,0.486439,0.0406603,0.0779993,0.00214522,0.00290416,3.45021e-05,0.00177825,0.00382346,0.0193103,0.0475794,0.00107153,0.000398624,0.601223,0.176507,0.000645389,0.064399,6.01455e-06,1.60068e-07,0.645432,1.4449e-05,0.00919554,0.706516,0.000152563,0.591562,2.50566e-06,2.76265e-09,6.64502e-09,0.000390703,0.000145248,2.62167e-08,0.0674365,0.32506,0.000202626,0.107686,0.0261767,0.00362495,0.113686,9.58434e-06,0.0155792,0.00233032,0.438692,0.0242529,6.68736e-05,0.541742,0.00362283,0.00544114,0.285074,0.018127,0.943261,0.0833105,0.0173305,6.19426e-11,0.289863,0.158786,0.365484,0.000218524,0.00675573,0.0068829,0.0339489,0.1272,0.0831446,0.000268587,0.02328,0.00025607,0.109234,0.00735779,0.00510902,0.0673158,0.00332655,0.0164557,0.588284,0.553251,0.147327,0.386101,0.628596,0.000859004,0.000474787,0.015853,0.00281148,0.00769413,0.00104249,0.0329394,0.436555,0.112469,0.441154,0.15612,0.660832,0.0201591,0.0294884,0.013711,0.00235533,0.0604981,0.239606,0.350461,0.00529076,2.47933e-06,0.00306837,0.000614025,4.71557e-05,0.0256281,5.20227e-07,5.22479e-06,0.961692,4.6666e-08,8.08363e-06,0.0289053,0.195392,0.0455037,0.00348374,9.7858e-05,4.89641e-08,0.000194427,0.0764074,0.025678,0.393543,6.1527e-12,1.11781e-06,1.31404e-06,0.0211405,0.019185,0.00580989,0.000425412,0.124632,0.199515,0.00688487,0.0367334,0.427794,1.54015e-05,0.170667,0.347879,0.0119366,0.00233834,0.174576,0.00434653,0.031869,0.000673614,0.000308348,0.00930051,0.616333,0.000211018,0.03302,0.00258246,0.105985,0.000143326,0.636791,0.0359783,0.251608,0.00123749,0.00123666,0.0727259,0.0487212,0.000559048,0.000165519,0.710825,8.64285e-06,0.000841914,8.7053e-06,0.00626958,0.000857545,0.000277353,0.0300273,0.493686,0.00406367,0.113555,0.00427905,2.10072e-06,0.00837337,3.67168e-06,0.22877,5.42454e-06,0.00687377,0.255034,0.253771,0.000498291,0.0171715,0.00278747,0.00261977,0.00340611,4.81214e-09,0.00195899,0.0156696,0.0169414,0.102448,0.550877,0.029672,0.123175,0.0182061,0.200188,0.0762646,0.266371,5.99893e-05,0.168118,2.23899e-05,0.0103342,0.251925,0.172066,0.0720324,0.00647589,0.19738,4.4758e-06,0.32541,0.301472,0.000829625,0.0818982,1.60674e-05,0.108669,2.66999e-05,0.178494,0.338195,0.146979,0.000540673,0.0238916,0.0483057,0.0790025,0.310539,0.0577178,9.35976e-05,0.0419973,0.0462024,0.265827,0.141761,0.153627,0.0186891,0.342497,0.171961,0.0173099,0.00800917,0.272406,0.0271921,0.00772611,0.0496113,0.20949,0.0730994,0.0857377,0.00742545,0.0319907,0.00876055,0.000731396,6.56136e-07,0.00150122,0.011292,0.0912686,0.425114,0.123863,2.69144e-10,0.0242146,0.000222469,0.327369,0.339826,0.12998,0.00790804,0.000246866,0.300809,0.000129486,0.000373087,3.32799e-06,0.0686325,4.68462e-07,0.0639461,0.00162707,9.66305e-07,0.000605921,0.080156,0.00432157,0.53753,0.0545112,0.510703,0.0651134,1.07323e-08,0.000166233,0.0137454,0.195675,0.0162521,0.00105692,0.396547,2.19358e-07,0.383224,0.229138,0.0639045,0.141461,0.0900204,3.37999e-07,0.0016009,6.70578e-05,3.33129e-05,1.87533e-07,2.57187e-07,0.36304,0.00269279,0.123626,0.0404561,0.00922288,0.285556,0.148915,1.49556e-08,3.01584e-07,4.03573e-14,0.223204,0.0108776,0.460679,0.431098,8.26526e-05,0.0123649,0.62577,5.18408e-06,3.25985e-07,0.0163476,0.204954,0.0236242,0.131825,0.0185433,0.00371012,3.36066e-05,9.78916e-05,4.90007e-06,0.00785048,0.0120484,1.24646e-08,0.056055,1.02407e-05,0.0176699,0.655862,0.00974414,3.07373e-14,2.90692e-05,0.0194612,0.299739,0.278645,0.733648,1.18877e-09,0.0780533,0.564811,9.59556e-08,0.0417776,0.000382419,0.11602,0.067657,0.113233,5.27938e-07,1.43759e-07,0.00433459,0.573835,0.989834,0.00716652,0.00848696,0.173868,0.109708,0.174594,0.0809806,0.154589,0.000666983,1.10468e-05,7.42739e-05,0.00106261,0.114361,0.000989686,0.000198588,6.65581e-07,0.00186222,0.0738743,0.0882327,0.00118464,2.5585e-05,0.270522,4.72107e-08,0.000909611,0.0934526,7.37056e-06,0.123404,0.430769,1.0525e-05,2.27251e-06,0.336623,0.00083068,6.10291e-06,0.00417724,0.033523,0.0313367,1.99553e-09,3.4513e-05,0.235147,0.689826,0.245965,9.01896e-06,0.148426,0.0983658,0.228743,0.000183911,0.156976,0.0327573,0.00398275,2.17877e-06,8.72333e-09,6.21016e-06,0.0131122,0.0199219,0.190404,0.135865,0.488841,0.0011505,0.180609,1.72391e-06,0.0415219,2.77675e-05,0.400137,1.0935e-05,0.22307,0.160699,0.000166563,0.0147448,0.181253,0.0422294,0.000287619,0.146486,0.0616692,0.262486,9.12616e-08,1.49158e-05,0.00512201,0.000213876,0.0254386,0.119485,0.0965376,0.377203,0.0432352,0.336564,0.35463,0.581771,0.800557,1.07875e-21,0.587524,0.208795,0.0713793,0.000112459,0.063279,0.53612,0.0185909,0.581874,0.0722318,0.377285,0.251388,0.000150553,0.236988,0.00354998,0.0528459,0.569605,0.526495,0.215897,0.191067,0.178116,0.513029,0.00285624,0.000378917,2.51502e-05,0.102829,0.321844,0.623136,0.708698,0.861766,0.855024,0.0695904,0.344004,0.000263951,0.00963762,0.00260019,0.0313227,7.83077e-05,0.00706802,0.111685,0.258394,0.0869065,0.432123,0.0152499,0.09639,0.494975,0.0224281,0.392155,0.0181413,0.0118613,0.457109,0.20076,0.025506,0.0453839,0.254547,0.000153314,0.51445,0.0011703,0.133485,1.69653e-06,0.47213,0.660884,0.253789,0.00916366,0.446908,0.315485,0.0544455,0.318577,0.4488,0.389888,0.236714,0.511254,0.553178,0.246387,0.0272681,0.22199,0.000702856,3.48924e-07,0.0379309,0.000259862,0.353942,0.192234,0.427276,0.161076,0.466967,0.283682,0.424668,0.7175,0.797471,0.0122555,0.341421,0.138015,0.831202,8.18238e-06,0.465544,2.3577e-05,0.349033,0.932831,0.0101726,0.34194,0.592696,4.25839e-05,0.0869207,0.0736429,0.0587619,0.317485,1.04363e-08,6.509e-06,0.119459,0.037907,1.30085e-07,0.135076,1.62962e-09,0.00527383,0.0417211,0.00506579,0.00126041,0.128394,0.583627,0.531474,0.0406675,2.35762e-07,0.528646,0.361524,0.31558,0.412744,0.54408,0.62698,0.513592,0.415367,0.0290437,0.45585,0.36864,0.538745,0.456862,0.122994,0.00632678,0.557093,0.330982,1.14913e-05,0.048225,0.271769,0.326875,0.339393,0.332211,0.306231,0.298354,0.278436,0.0701109,0.000431315,0.0206327,1.99671e-06,0.401917,1.62767e-05,0.00183631,0.0169327,1.47866e-06,6.23683e-09,0.19449,0.66153,0.523749,0.000745777,0.307426,0.790204,8.56276e-11,5.83955e-07,0.356232,3.68331e-05,0.000354544,0.318338,2.25492e-05,0.00835262,0.102654,0.00704457,0.0555558,1.90876e-06,0.00174232,0.00540731,0.116969,1.01198e-11,1.47361e-05,0.0494979,0.256708,0.000872261,5.3555e-05,0.0111501,0.0124905,0.0375572,4.88829e-08,0.54721,0.388459,0.00728123,0.627637,0.280757,7.00296e-12,0.00881395,0.00906953,0.000769645,3.12946e-07,0.00846526,0.308589,0.291523,0.0208148,0.00645096,0.00146994,0.15063,0.198077,9.52083e-14,0.069449,0.0179916,0.138495,0.208834,0.0587417,0.082459,0.342366,0.109684,0.322704,0.403482,0.181288,0.230841,0.352328,0.00343034,0.00983499,0.265112,0.0633313,0.000226604,0.0854747,0.0747609,0.000208987,0.312881,1.05528e-05,0.244656,0.192188,0.158985,5.7873e-08,0.0972854,4.36302e-06,0.034215,1.5042e-08,0.303699,0.198326,1.43258e-05,0.00363093,0.00476409,2.67918e-08,0.000165514,0.0309842,0.334983,0.00151567,0.287909,2.92062e-05,2.30364e-07,0.392533,0.0148293,0.316002,0.330317,0.321404,0.000143779,0.300542,0.379651,0.0184244,0.000960724,0.375521,0.271405,0.311201,0.221943,0.306427,0.000115415,0.00307764,0.208775,0.390438,0.343014,1.98499e-05,0.276922,0.0129027,0.055329,0.461742,2.39768e-05,1.38127e-08,0.000438215,2.96731e-10,0.0156255,0.0877361,0.000121621,6.01944e-10,0.126615,0.0669467,0.0879453,0.136111,0.00182507,1.04917e-08,0.00536078,0.358198,0.29552,0.131776,0.0132168,0.104606,0.00144253,0.104167,0.000907067,0.00606331,0.000348792,0.205215,0.00103241,0.0724304,0.000235537,6.86172e-07,0.0604892,0.00196424,0.056553,0.00305963,0.0196242,6.71363e-08,0.00227842,0.398887,0.0138446,0.310732,0.349611,0.0221952,0.385709,0.278202,6.81112e-17,0.0152991,0.209809,0.0033355,0.319519,0.0064285,0.430805,4.98223e-07,0.140472,8.68737e-08,0.336314,3.28839e-07,0.00121753,0.303359,0.0494743,0.106207,0.425912,0.380826,7.80734e-07,5.56094e-06,0.151046,6.62695e-05,0.347171,9.06865e-09,0.15463,0.000500369,5.30535e-05,1.95803e-05,0.250466,0.0165533,0.115686,0.0164276,0.162633,0.0090162,0.27567,0.00312626,0.0628839,0.0133264,0.00711361,0.0401809
|tfbs_overrepresentation=3.87588e-07,0.0958562,0.351299,0.078254,2.6547e-06,0.43203,0.0706464,0.224712,0.0539364,0.000915096,0.0265483,0.0685476,0.294377,0.0015934,9.26734e-06,0.101024,0.00224213,0.000749269,4.69153e-08,0.173528,1.84424e-06,0.211047,0.13286,0.153106,0.00238901,0.332688,0.324018,0.146582,0.227906,2.60524e-05,0.31768,0.00117848,0.0298713,0.0586706,0.000231035,0.000475197,0.856615,0.00255175,0.192426,0.108683,0.0127826,0.0406818,0.00219687,0.0459718,9.28587e-11,0.0596699,0.0625547,2.61868e-05,0.178503,7.54537e-05,0.243359,0.0886583,0.00678248,0.150136,0.00638392,0.0632035,0.172598,0.328738,0.127101,0.000932755,0.00119897,0.00267514,0.00101619,0.00794097,0.000127124,0.00352005,0.0064565,0.0980005,0.0101867,8.55704e-07,0.188991,0.110232,0.0108963,7.09337e-05,0.012429,0.0283664,1.00164e-06,0.0717582,0.0613084,0.0120583,0.154245,3.64601e-07,0.00249658,2.44539e-06,0.0206187,0.0852575,0.104918,0.323505,0.207544,0.102375,1.3607e-08,0.0812726,0.153861,0.0777027,0.0100263,0.184264,0.016992,0.242703,0.0118178,0.00221844,0.0939617,6.49978e-09,0.225088,0.0610111,0.0648403,0.0672793,0.00618461,0.0326652,0.228612,0.097251,0.000406704,0.00159912,0.00268249,0.0293017,3.61846e-05,0.0556189,0.000573215,0.00442914,0.220791,0.13579,0.262107,0.331577,0.000136665,0.000497828,0.000849667,0.277102,0.146529,0.0245339,0.136609,0.214614,0.0973103,0.121587,0.0935301,0.0376876,8.78439e-05,0.016024,0.105753,0.0905147,0.0544577,0.0065834,0.037671,4.20565e-06,0.000642942,5.5637e-07,0.0672699,0.112838,0.0134071,0.00975686,0.0640569,0.193163,1.44588e-07,0.00237488,1.00736e-10,0.0439093,0.070163,0.188135,2.72528e-07,0.350865,0.0846706,0.0555742,8.64038e-05,0.000683905,0.186743,8.98322e-06,0.000229552,0.183121,0.065826,0.00164738,1.20019e-08,0.463935,0.281162,0.000127325,0.0214914,0.0885874,0.00879177,0.145577,0.22277,0.284267,0.27935,0.00175647,0.00322219,0.195671,1.59931e-05,6.21348e-05,0.11983,0.190123,0.000410696,0.0660586,0.134265,0.040954,0.172119,0.00532306,7.99649e-05,0.351465,0.18064,0.0772176,3.43833e-07,0.0984435,0.00024302,0.0164904,0.0109611,0.0986228,0.0508565,0.0989516,0.21691,0.00175814,0.00219974,0.0314403,0.000674656,0.0432208,0.0752697,0.167805,0.0200942,0.00114296,0.00387007,0.265567,0.0367027,0.162511,0.00547179,0.165687,0.0275026,0.000157294,0.0331894,0.0353118,2.87011e-16,0.00161784,0.220536,0.0101633,0.00504063,0.000168335,0.167847,0.000196472,0.0687568,0.124225,0.1547,0.0119318,0.00308114,1.56127e-05,7.47433e-07,0.331711,0.285222,0.511,0.0132931,0.134615,0.00124993,0.000123993,0.00914056,0.179065,1.66439e-06,0.00127434,0.00323503,3.372e-09,0.00518946,0.000745286,3.18401e-05,0.000233772,0.172268,0.00669013,0.00667088,0.180042,0.101058,0.000341972,0.0363385,0.204241,0.0568578,0.00904204,1.47483e-05,0.148683,0.188945,0.00785145,0.000252431,0.103245,0.387442,0.627158,0.000512128,0.0626022,0.2074,0.000145041,0.345431,0.0451674,6.66886e-05,2.45662e-07,0.073513,0.75925,0.493893,0.230921,0.396701,0.0180957,0.0083276,0.0247857,2.94566e-06,0.000643343,0.0533299,0.486439,0.0406603,0.0779993,0.00214522,0.00290416,3.45021e-05,0.00177825,0.00382346,0.0193103,0.0475794,0.00107153,0.000398624,0.601223,0.176507,0.000645389,0.064399,6.01455e-06,1.60068e-07,0.645432,1.4449e-05,0.00919554,0.706516,0.000152563,0.591562,2.50566e-06,2.76265e-09,6.64502e-09,0.000390703,0.000145248,2.62167e-08,0.0674365,0.32506,0.000202626,0.107686,0.0261767,0.00362495,0.113686,9.58434e-06,0.0155792,0.00233032,0.438692,0.0242529,6.68736e-05,0.541742,0.00362283,0.00544114,0.285074,0.018127,0.943261,0.0833105,0.0173305,6.19426e-11,0.289863,0.158786,0.365484,0.000218524,0.00675573,0.0068829,0.0339489,0.1272,0.0831446,0.000268587,0.02328,0.00025607,0.109234,0.00735779,0.00510902,0.0673158,0.00332655,0.0164557,0.588284,0.553251,0.147327,0.386101,0.628596,0.000859004,0.000474787,0.015853,0.00281148,0.00769413,0.00104249,0.0329394,0.436555,0.112469,0.441154,0.15612,0.660832,0.0201591,0.0294884,0.013711,0.00235533,0.0604981,0.239606,0.350461,0.00529076,2.47933e-06,0.00306837,0.000614025,4.71557e-05,0.0256281,5.20227e-07,5.22479e-06,0.961692,4.6666e-08,8.08363e-06,0.0289053,0.195392,0.0455037,0.00348374,9.7858e-05,4.89641e-08,0.000194427,0.0764074,0.025678,0.393543,6.1527e-12,1.11781e-06,1.31404e-06,0.0211405,0.019185,0.00580989,0.000425412,0.124632,0.199515,0.00688487,0.0367334,0.427794,1.54015e-05,0.170667,0.347879,0.0119366,0.00233834,0.174576,0.00434653,0.031869,0.000673614,0.000308348,0.00930051,0.616333,0.000211018,0.03302,0.00258246,0.105985,0.000143326,0.636791,0.0359783,0.251608,0.00123749,0.00123666,0.0727259,0.0487212,0.000559048,0.000165519,0.710825,8.64285e-06,0.000841914,8.7053e-06,0.00626958,0.000857545,0.000277353,0.0300273,0.493686,0.00406367,0.113555,0.00427905,2.10072e-06,0.00837337,3.67168e-06,0.22877,5.42454e-06,0.00687377,0.255034,0.253771,0.000498291,0.0171715,0.00278747,0.00261977,0.00340611,4.81214e-09,0.00195899,0.0156696,0.0169414,0.102448,0.550877,0.029672,0.123175,0.0182061,0.200188,0.0762646,0.266371,5.99893e-05,0.168118,2.23899e-05,0.0103342,0.251925,0.172066,0.0720324,0.00647589,0.19738,4.4758e-06,0.32541,0.301472,0.000829625,0.0818982,1.60674e-05,0.108669,2.66999e-05,0.178494,0.338195,0.146979,0.000540673,0.0238916,0.0483057,0.0790025,0.310539,0.0577178,9.35976e-05,0.0419973,0.0462024,0.265827,0.141761,0.153627,0.0186891,0.342497,0.171961,0.0173099,0.00800917,0.272406,0.0271921,0.00772611,0.0496113,0.20949,0.0730994,0.0857377,0.00742545,0.0319907,0.00876055,0.000731396,6.56136e-07,0.00150122,0.011292,0.0912686,0.425114,0.123863,2.69144e-10,0.0242146,0.000222469,0.327369,0.339826,0.12998,0.00790804,0.000246866,0.300809,0.000129486,0.000373087,3.32799e-06,0.0686325,4.68462e-07,0.0639461,0.00162707,9.66305e-07,0.000605921,0.080156,0.00432157,0.53753,0.0545112,0.510703,0.0651134,1.07323e-08,0.000166233,0.0137454,0.195675,0.0162521,0.00105692,0.396547,2.19358e-07,0.383224,0.229138,0.0639045,0.141461,0.0900204,3.37999e-07,0.0016009,6.70578e-05,3.33129e-05,1.87533e-07,2.57187e-07,0.36304,0.00269279,0.123626,0.0404561,0.00922288,0.285556,0.148915,1.49556e-08,3.01584e-07,4.03573e-14,0.223204,0.0108776,0.460679,0.431098,8.26526e-05,0.0123649,0.62577,5.18408e-06,3.25985e-07,0.0163476,0.204954,0.0236242,0.131825,0.0185433,0.00371012,3.36066e-05,9.78916e-05,4.90007e-06,0.00785048,0.0120484,1.24646e-08,0.056055,1.02407e-05,0.0176699,0.655862,0.00974414,3.07373e-14,2.90692e-05,0.0194612,0.299739,0.278645,0.733648,1.18877e-09,0.0780533,0.564811,9.59556e-08,0.0417776,0.000382419,0.11602,0.067657,0.113233,5.27938e-07,1.43759e-07,0.00433459,0.573835,0.989834,0.00716652,0.00848696,0.173868,0.109708,0.174594,0.0809806,0.154589,0.000666983,1.10468e-05,7.42739e-05,0.00106261,0.114361,0.000989686,0.000198588,6.65581e-07,0.00186222,0.0738743,0.0882327,0.00118464,2.5585e-05,0.270522,4.72107e-08,0.000909611,0.0934526,7.37056e-06,0.123404,0.430769,1.0525e-05,2.27251e-06,0.336623,0.00083068,6.10291e-06,0.00417724,0.033523,0.0313367,1.99553e-09,3.4513e-05,0.235147,0.689826,0.245965,9.01896e-06,0.148426,0.0983658,0.228743,0.000183911,0.156976,0.0327573,0.00398275,2.17877e-06,8.72333e-09,6.21016e-06,0.0131122,0.0199219,0.190404,0.135865,0.488841,0.0011505,0.180609,1.72391e-06,0.0415219,2.77675e-05,0.400137,1.0935e-05,0.22307,0.160699,0.000166563,0.0147448,0.181253,0.0422294,0.000287619,0.146486,0.0616692,0.262486,9.12616e-08,1.49158e-05,0.00512201,0.000213876,0.0254386,0.119485,0.0965376,0.377203,0.0432352,0.336564,0.35463,0.581771,0.800557,1.07875e-21,0.587524,0.208795,0.0713793,0.000112459,0.063279,0.53612,0.0185909,0.581874,0.0722318,0.377285,0.251388,0.000150553,0.236988,0.00354998,0.0528459,0.569605,0.526495,0.215897,0.191067,0.178116,0.513029,0.00285624,0.000378917,2.51502e-05,0.102829,0.321844,0.623136,0.708698,0.861766,0.855024,0.0695904,0.344004,0.000263951,0.00963762,0.00260019,0.0313227,7.83077e-05,0.00706802,0.111685,0.258394,0.0869065,0.432123,0.0152499,0.09639,0.494975,0.0224281,0.392155,0.0181413,0.0118613,0.457109,0.20076,0.025506,0.0453839,0.254547,0.000153314,0.51445,0.0011703,0.133485,1.69653e-06,0.47213,0.660884,0.253789,0.00916366,0.446908,0.315485,0.0544455,0.318577,0.4488,0.389888,0.236714,0.511254,0.553178,0.246387,0.0272681,0.22199,0.000702856,3.48924e-07,0.0379309,0.000259862,0.353942,0.192234,0.427276,0.161076,0.466967,0.283682,0.424668,0.7175,0.797471,0.0122555,0.341421,0.138015,0.831202,8.18238e-06,0.465544,2.3577e-05,0.349033,0.932831,0.0101726,0.34194,0.592696,4.25839e-05,0.0869207,0.0736429,0.0587619,0.317485,1.04363e-08,6.509e-06,0.119459,0.037907,1.30085e-07,0.135076,1.62962e-09,0.00527383,0.0417211,0.00506579,0.00126041,0.128394,0.583627,0.531474,0.0406675,2.35762e-07,0.528646,0.361524,0.31558,0.412744,0.54408,0.62698,0.513592,0.415367,0.0290437,0.45585,0.36864,0.538745,0.456862,0.122994,0.00632678,0.557093,0.330982,1.14913e-05,0.048225,0.271769,0.326875,0.339393,0.332211,0.306231,0.298354,0.278436,0.0701109,0.000431315,0.0206327,1.99671e-06,0.401917,1.62767e-05,0.00183631,0.0169327,1.47866e-06,6.23683e-09,0.19449,0.66153,0.523749,0.000745777,0.307426,0.790204,8.56276e-11,5.83955e-07,0.356232,3.68331e-05,0.000354544,0.318338,2.25492e-05,0.00835262,0.102654,0.00704457,0.0555558,1.90876e-06,0.00174232,0.00540731,0.116969,1.01198e-11,1.47361e-05,0.0494979,0.256708,0.000872261,5.3555e-05,0.0111501,0.0124905,0.0375572,4.88829e-08,0.54721,0.388459,0.00728123,0.627637,0.280757,7.00296e-12,0.00881395,0.00906953,0.000769645,3.12946e-07,0.00846526,0.308589,0.291523,0.0208148,0.00645096,0.00146994,0.15063,0.198077,9.52083e-14,0.069449,0.0179916,0.138495,0.208834,0.0587417,0.082459,0.342366,0.109684,0.322704,0.403482,0.181288,0.230841,0.352328,0.00343034,0.00983499,0.265112,0.0633313,0.000226604,0.0854747,0.0747609,0.000208987,0.312881,1.05528e-05,0.244656,0.192188,0.158985,5.7873e-08,0.0972854,4.36302e-06,0.034215,1.5042e-08,0.303699,0.198326,1.43258e-05,0.00363093,0.00476409,2.67918e-08,0.000165514,0.0309842,0.334983,0.00151567,0.287909,2.92062e-05,2.30364e-07,0.392533,0.0148293,0.316002,0.330317,0.321404,0.000143779,0.300542,0.379651,0.0184244,0.000960724,0.375521,0.271405,0.311201,0.221943,0.306427,0.000115415,0.00307764,0.208775,0.390438,0.343014,1.98499e-05,0.276922,0.0129027,0.055329,0.461742,2.39768e-05,1.38127e-08,0.000438215,2.96731e-10,0.0156255,0.0877361,0.000121621,6.01944e-10,0.126615,0.0669467,0.0879453,0.136111,0.00182507,1.04917e-08,0.00536078,0.358198,0.29552,0.131776,0.0132168,0.104606,0.00144253,0.104167,0.000907067,0.00606331,0.000348792,0.205215,0.00103241,0.0724304,0.000235537,6.86172e-07,0.0604892,0.00196424,0.056553,0.00305963,0.0196242,6.71363e-08,0.00227842,0.398887,0.0138446,0.310732,0.349611,0.0221952,0.385709,0.278202,6.81112e-17,0.0152991,0.209809,0.0033355,0.319519,0.0064285,0.430805,4.98223e-07,0.140472,8.68737e-08,0.336314,3.28839e-07,0.00121753,0.303359,0.0494743,0.106207,0.425912,0.380826,7.80734e-07,5.56094e-06,0.151046,6.62695e-05,0.347171,9.06865e-09,0.15463,0.000500369,5.30535e-05,1.95803e-05,0.250466,0.0165533,0.115686,0.0164276,0.162633,0.0090162,0.27567,0.00312626,0.0628839,0.0133264,0.00711361,0.0401809
}}
}}

Revision as of 11:38, 19 October 2012


Full id: C1741_Fibroblast_Synoviocyte_sacrococcigeal_Preadipocyte_tenocyte_Adipocyte_mesenchymal



Phase1 CAGE Peaks

Hg19::chr15:49715431..49715448,+p2@FGF7
Hg19::chr15:49715449..49715464,+p1@FGF7
Hg19::chr15:49716561..49716579,+p9@FGF7
Hg19::chr15:49716638..49716654,+p8@FGF7
Hg19::chr15:49716675..49716698,+p10@FGF7


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data


No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data


No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>


Cell Type
Ontology termp-valuen
fibroblast8.38e-1976
muscle precursor cell6.88e-1458
myoblast6.88e-1458
multi-potent skeletal muscle stem cell6.88e-1458
muscle cell6.79e-1355
skin fibroblast1.03e-1123
contractile cell3.77e-1159
electrically responsive cell2.23e-1061
electrically active cell2.23e-1061
preadipocyte3.28e-1012
smooth muscle cell3.80e-0943
smooth muscle myoblast3.80e-0943
multi fate stem cell2.39e-08427
fat cell2.99e-0815
somatic stem cell4.95e-08433
stem cell3.21e-07441
Uber Anatomy
Ontology termp-valuen
somite7.69e-1571
presomitic mesoderm7.69e-1571
presumptive segmental plate7.69e-1571
dermomyotome7.69e-1571
trunk paraxial mesoderm7.69e-1571
paraxial mesoderm2.09e-1472
presumptive paraxial mesoderm2.09e-1472
muscle tissue3.00e-1464
musculature3.00e-1464
musculature of body3.00e-1464
dense mesenchyme tissue5.49e-1473
skeletal muscle tissue1.58e-1362
striated muscle tissue1.58e-1362
myotome1.58e-1362
multilaminar epithelium2.89e-1283
epithelial vesicle4.46e-1278
trunk mesenchyme2.15e-10122
integument3.25e-0946
integumental system3.25e-0946
surface structure4.78e-0999
smooth muscle tissue4.95e-0915
trunk6.51e-09199
skin of body1.40e-0841
organism subdivision4.99e-08264
mesenchyme5.40e-08160
entire embryonic mesenchyme5.40e-08160
mesoderm2.18e-07315
mesoderm-derived structure2.18e-07315
presumptive mesoderm2.18e-07315
heart3.56e-0724
primitive heart tube3.56e-0724
primary heart field3.56e-0724
anterior lateral plate mesoderm3.56e-0724
heart tube3.56e-0724
heart primordium3.56e-0724
cardiac mesoderm3.56e-0724
cardiogenic plate3.56e-0724
heart rudiment3.56e-0724
omentum4.77e-076
peritoneum4.77e-076
abdominal cavity4.77e-076
visceral peritoneum4.77e-076
primary circulatory organ8.71e-0727
Disease
Ontology termp-valuen
ovarian cancer1.82e-1014


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data


No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data


This analysis result is provided for C0 - C305 clusters.