FFCP PHASE1:Mm9::chr18:37911255..37911306,+: Difference between revisions
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|id=chr18:37911255..37911306,+ | |id=chr18:37911255..37911306,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.38e-11!23;CL:0000337!5.38e-11!23;CL:0000221!2.33e-09!44;CL:0000133!2.33e-09!44;CL:0002319!3.95e-09!43;CL:0000540!1.23e-07!33;CL:0000047!1.23e-07!33;CL:0000031!1.23e-07!33;CL:0000404!1.23e-07!33 | |ontology_enrichment_celltype=CL:0000117!5.38e-11!23;CL:0000337!5.38e-11!23;CL:0000221!2.33e-09!44;CL:0000133!2.33e-09!44;CL:0002319!3.95e-09!43;CL:0000540!1.23e-07!33;CL:0000047!1.23e-07!33;CL:0000031!1.23e-07!33;CL:0000404!1.23e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.45e-11,23;CL:0000337,3.45e-11,23;CL:0000221,4.55e-09,44;CL:0000133,4.55e-09,44;CL:0002319,7.89e-09,43;CL:0000540,3.11e-07,33;CL:0000047,3.11e-07,33;CL:0000031,3.11e-07,33;CL:0000404,3.11e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.25e-16!75;UBERON:0001016!1.25e-16!75;UBERON:0001017!1.39e-16!73;UBERON:0005743!1.39e-16!73;UBERON:0004121!2.17e-16!102;UBERON:0000924!2.17e-16!102;UBERON:0006601!2.17e-16!102;UBERON:0002346!1.64e-15!71;UBERON:0003075!1.64e-15!71;UBERON:0007284!1.64e-15!71;UBERON:0000033!1.83e-15!63;UBERON:0001049!3.15e-15!52;UBERON:0005068!3.15e-15!52;UBERON:0006241!3.15e-15!52;UBERON:0007135!3.15e-15!52;UBERON:0000955!1.20e-13!50;UBERON:0006238!1.20e-13!50;UBERON:0002616!4.27e-13!49;UBERON:0003056!3.20e-12!49;UBERON:0003080!1.60e-10!40;UBERON:0002780!3.50e-10!39;UBERON:0001890!3.50e-10!39;UBERON:0006240!3.50e-10!39;UBERON:0000153!3.21e-09!94;UBERON:0002020!2.06e-08!34;UBERON:0000468!1.30e-07!333;UBERON:0000025!1.84e-07!114;UBERON:0004111!5.43e-07!122;UBERON:0007811!7.07e-07!86 | |ontology_enrichment_uberon=UBERON:0000073!1.25e-16!75;UBERON:0001016!1.25e-16!75;UBERON:0001017!1.39e-16!73;UBERON:0005743!1.39e-16!73;UBERON:0004121!2.17e-16!102;UBERON:0000924!2.17e-16!102;UBERON:0006601!2.17e-16!102;UBERON:0002346!1.64e-15!71;UBERON:0003075!1.64e-15!71;UBERON:0007284!1.64e-15!71;UBERON:0000033!1.83e-15!63;UBERON:0001049!3.15e-15!52;UBERON:0005068!3.15e-15!52;UBERON:0006241!3.15e-15!52;UBERON:0007135!3.15e-15!52;UBERON:0000955!1.20e-13!50;UBERON:0006238!1.20e-13!50;UBERON:0002616!4.27e-13!49;UBERON:0003056!3.20e-12!49;UBERON:0003080!1.60e-10!40;UBERON:0002780!3.50e-10!39;UBERON:0001890!3.50e-10!39;UBERON:0006240!3.50e-10!39;UBERON:0000153!3.21e-09!94;UBERON:0002020!2.06e-08!34;UBERON:0000468!1.30e-07!333;UBERON:0000025!1.84e-07!114;UBERON:0004111!5.43e-07!122;UBERON:0007811!7.07e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.26e-16,75;UBERON:0001017,2.60e-16,73;UBERON:0004121,2.73e-16,95;UBERON:0000924,2.73e-16,95;UBERON:0006601,2.73e-16,95;UBERON:0002346,4.28e-16,64;UBERON:0003075,4.28e-16,64;UBERON:0007284,4.28e-16,64;UBERON:0000073,5.39e-16,54;UBERON:0001049,2.22e-15,52;UBERON:0005068,2.22e-15,52;UBERON:0006241,2.22e-15,52;UBERON:0007135,2.22e-15,52;UBERON:0010371,4.55e-15,73;UBERON:0010314,3.14e-14,92;UBERON:0000955,7.55e-13,47;UBERON:0006238,7.55e-13,47;UBERON:0002616,2.79e-12,46;UBERON:0003056,3.01e-12,49;UBERON:0003080,1.93e-10,40;UBERON:0002780,4.40e-10,39;UBERON:0001890,4.40e-10,39;UBERON:0006240,4.40e-10,39;UBERON:0002020,3.10e-08,34;UBERON:0000025,1.13e-07,114;UBERON:0004111,2.76e-07,122 | |||
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| ||
|short_description=p1@Pcdhgb7 | |short_description=p1@Pcdhgb7 | ||
}} | }} |
Revision as of 01:49, 15 November 2012
Short description: | p1@Pcdhgb7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcdhgb7_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | -126bp_to_NM_033579, uc008era.1_5end |
EntrezGene: | Pcdhgb7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.45e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.45e-11 | 23 |
ectodermal cell | 4.55e-09 | 44 |
neurectodermal cell | 4.55e-09 | 44 |
neural cell | 7.89e-09 | 43 |
neuron | 3.11e-07 | 33 |
neuronal stem cell | 3.11e-07 | 33 |
neuroblast | 3.11e-07 | 33 |
electrically signaling cell | 3.11e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.26e-16 | 75 |
central nervous system | 2.60e-16 | 73 |
ectoderm-derived structure | 2.73e-16 | 95 |
ectoderm | 2.73e-16 | 95 |
presumptive ectoderm | 2.73e-16 | 95 |
neurectoderm | 4.28e-16 | 64 |
neural plate | 4.28e-16 | 64 |
presumptive neural plate | 4.28e-16 | 64 |
regional part of nervous system | 5.39e-16 | 54 |
neural tube | 2.22e-15 | 52 |
neural rod | 2.22e-15 | 52 |
future spinal cord | 2.22e-15 | 52 |
neural keel | 2.22e-15 | 52 |
ecto-epithelium | 4.55e-15 | 73 |
structure with developmental contribution from neural crest | 3.14e-14 | 92 |
brain | 7.55e-13 | 47 |
future brain | 7.55e-13 | 47 |
regional part of brain | 2.79e-12 | 46 |
pre-chordal neural plate | 3.01e-12 | 49 |
anterior neural tube | 1.93e-10 | 40 |
regional part of forebrain | 4.40e-10 | 39 |
forebrain | 4.40e-10 | 39 |
future forebrain | 4.40e-10 | 39 |
gray matter | 3.10e-08 | 34 |
tube | 1.13e-07 | 114 |
anatomical conduit | 2.76e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.