FFCP PHASE1:Mm9::chr10:82226833..82226864,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr10:82226833..82226864,- | |id=chr10:82226833..82226864,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001041!1.44e-09!92;UBERON:0004177!2.90e-09!29;UBERON:0003104!3.24e-09!131;UBERON:0009142!3.24e-09!131;UBERON:0005057!4.88e-09!51;UBERON:0000077!6.26e-09!97;UBERON:0004921!8.57e-09!126;UBERON:0004185!8.57e-09!126;UBERON:0000926!1.12e-08!193;UBERON:0004120!1.12e-08!193;UBERON:0006603!1.12e-08!193;UBERON:0001007!1.82e-08!128;UBERON:0001555!1.82e-08!128;UBERON:0007026!1.82e-08!128;UBERON:0004119!2.18e-08!130;UBERON:0000925!2.18e-08!130;UBERON:0006595!2.18e-08!130;UBERON:0002405!3.33e-08!70;UBERON:0002390!1.42e-07!45;UBERON:0003061!1.42e-07!45;UBERON:0002193!1.96e-07!48;UBERON:0001048!2.62e-07!147;UBERON:0001004!3.32e-07!42;UBERON:0000065!5.25e-07!41;UBERON:0005911!6.43e-07!69;UBERON:0003408!6.74e-07!24 | |ontology_enrichment_uberon=UBERON:0001041!1.44e-09!92;UBERON:0004177!2.90e-09!29;UBERON:0003104!3.24e-09!131;UBERON:0009142!3.24e-09!131;UBERON:0005057!4.88e-09!51;UBERON:0000077!6.26e-09!97;UBERON:0004921!8.57e-09!126;UBERON:0004185!8.57e-09!126;UBERON:0000926!1.12e-08!193;UBERON:0004120!1.12e-08!193;UBERON:0006603!1.12e-08!193;UBERON:0001007!1.82e-08!128;UBERON:0001555!1.82e-08!128;UBERON:0007026!1.82e-08!128;UBERON:0004119!2.18e-08!130;UBERON:0000925!2.18e-08!130;UBERON:0006595!2.18e-08!130;UBERON:0002405!3.33e-08!70;UBERON:0002390!1.42e-07!45;UBERON:0003061!1.42e-07!45;UBERON:0002193!1.96e-07!48;UBERON:0001048!2.62e-07!147;UBERON:0001004!3.32e-07!42;UBERON:0000065!5.25e-07!41;UBERON:0005911!6.43e-07!69;UBERON:0003408!6.74e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,1.87e-10,80;UBERON:0004177,2.72e-09,29;UBERON:0005057,2.72e-09,29;UBERON:0004921,3.14e-09,114;UBERON:0001007,7.20e-09,116;UBERON:0001555,7.20e-09,116;UBERON:0007026,7.20e-09,116;UBERON:0004119,9.00e-09,118;UBERON:0000925,9.00e-09,118;UBERON:0006595,9.00e-09,118;UBERON:0000077,1.02e-07,35;UBERON:0002390,1.34e-07,45;UBERON:0003061,1.34e-07,45;UBERON:0007811,1.71e-07,36;UBERON:0002193,1.87e-07,48;UBERON:0002405,1.87e-07,48;UBERON:0001004,3.17e-07,42;UBERON:0001048,3.28e-07,134;UBERON:0000065,5.01e-07,41;UBERON:0003408,6.36e-07,24;UBERON:0005911,6.47e-07,69;UBERON:0000153,9.63e-07,43;UBERON:0002370,9.88e-07,23;UBERON:0000974,9.88e-07,23;UBERON:0004807,9.88e-07,23;UBERON:0005058,9.88e-07,23;UBERON:0003351,9.88e-07,23;UBERON:0009113,9.88e-07,23;UBERON:0003295,9.88e-07,23;UBERON:0009722,9.88e-07,23;UBERON:0005562,9.88e-07,23;UBERON:0007690,9.88e-07,23 | |||
|phase1_expression=2.88267924788629,2.79180326111489,0.909998478779072,1.20985684522732,1.00179145989269,4.02910252588535,5.60670337429262,12.3958390503913,4.78681655315667,6.55380673701582,12.1564757440109,12.8433175982492,10.2720437958723,11.0149707047937,6.66219523631325,11.1361397064404,20.2872944657163,10.4102514568218,10.4206969540361,12.3072999021429,3.74190476664707,4.66667470644161,6.00759515019551,2.55987876469451,3.89995777814189,2.8711598205751,4.30761996159075,3.01659725760245,6.46079626151671,5.79669298447841,7.09537634096975,4.44521471421742,1.23012957516914,0,6.64358725427932,8.14549762256613,5.71674197534634,23.8563029520037,17.9707129240474,25.1291397107423,26.4704169613956,19.1252735788365,28.6451108288381,5.91715044485213,5.67710814829281,6.42413632565885,0,0.436050312760893,1.09843091367236,1.1665793944457,1.67983705950435,0,6.87908684836719,6.5282592781021,5.37750078627942,2.31533492432352,3.15186783932632,1.54701627683233,2.42779753031517,1.05798195854407,0,1.35537812827653,0,0,0,0,0.599200221036809,0.384218305321555,3.94020526772215,2.16009501330705,1.89292465216244,0.856952953211411,1.32521124570968,3.55223317723367,2.20444583341944,3.67687514644008,0,1.40456071893706,1.68967186581868,2.2420668914133,2.56165402086747,3.12548022334056,2.79182999001381,2.25105044012672,2.90316670775939,1.47314292736834,2.13557521198654,2.23679334990361,5.90664307998836,4.00529268565963,4.34796733052517,1.72084775396277,2.03991400112325,2.15881276655127,3.24888208723835,3.13618820968135,2.94933282276679,6.98764322570037,4.1565760736459,1.06001872353102,5.0703631119605,1.28326477414318,0,0,3.030874574157,5.06719730950197,4.04419556011827,3.76806803072898,11.9111426477699,3.85949561568544,3.29622120855658,3.04465478312141,4.15107895060905,3.46662073271032,3.29248379979973,2.63899841792318,2.71914464507811,2.4581890676385,18.5768215909474,3.23533699894818,7.28777010919299,7.75800405016355,9.31958806090611,2.04946557908083,1.8850203613211,4.59822699375465,9.70502508497954,13.197860081855,9.40319680340679,2.99581278809645,3.20250421973039,1.88481528169297,2.60736480288415,2.04572365864264,2.49345653471472,3.89379031362618,2.74966282395854,6.09594155989456,6.06534620240819,5.47148825304832,5.20481771850815,4.36813998423599,5.22180176435513,6.93242162044289,4.96666443804693,6.14945857367279,5.90320864726292,3.62184719034622,4.95806383745537,3.59301552318857,5.10258260075452,3.94552318369635,4.72680323683516,3.1342694986995,2.88094990971121,4.37875387000685,7.02213187313235,8.23513302767089,6.25159698670304,3.93538967817454,2.57978665979206,3.96136535214233,2.13070262026689,3.14822770795846,4.31947916084659,5.11574678450897,4.82892122519315,4.78737903705395,4.27855609775049,2.95501435342371,3.24275238183423,2.77779976108131,3.07370161407471,2.68412837520744,2.52347938276953,1.13195073617213,4.95628174475697,1.32225283331772,5.33220626338085,6.50262681209228,4.76809606891745,3.42861991859682,4.00280478920767,3.80451252225118,3.79623249235609,3.45867804920423,2.01068167040216,3.58121649674071,5.26403035221624,4.49409704327111,4.75503709724327,3.18626037206988,4.36236172192088,5.48392860526698,3.38123207019241,5.29493452397817,4.46090720485539,2.17421041659988,2.71917109634306,2.80459281161244,3.1399745568275,1.72756029490521,2.66807364378434,5.6727335943472,9.82794975566015,8.54476027062444,9.73728582664814,10.8529721888588,7.89340140522401,6.04161888646702,5.18832725680113,6.31491250332587,8.62609239164127,3.34926852901653,7.80094182786401,4.04126204715379,5.74071723270119,3.37710464954357,4.61882975416512,4.73728529426212,5.37784422258685,5.26209765903083,6.80601720036656,5.86271901046355,4.52282917683426,2.53673742215138,8.03939234941574,3.5434350343804,4.30527875375215,3.60499292374624,6.04397436530635,6.94315481191256,3.01582567878545,2.17562273527484,2.45882136509518,3.58717770196152,4.33486592967038,2.81308047821288,2.13115428989678,3.7870639080656,4.73262329124385,2.73307121007647,2.15423397732799,4.30143836314594,3.7875774594007,3.11384183867716,4.04810701674894,4.09158201075837,3.16230222357219,3.21321316421807,4.82596289708113,2.67098405500883,3.25773918707152,5.27904393512113,2.65490276679926,3.64170954232472,4.23252979750651,4.71512699389745,2.65771703592696,5.22639751504677,2.84271122485043,5.81653967164009,5.34746067577082,3.47640433729398,2.10837217149998,7.21948802737308,3.74483566329167,5.58189391497062,2.71653235943784,4.92975180572662,3.54680467284547,4.28085162244969,4.27827453565514,1.522324745573,4.92810586933792,2.96564899209348,4.41056796109924,2.14352128823924,4.52100394748536,5.97097956788743,3.22305328808468,4.92422699235184,2.62332752966866,3.52308073819968,9.7396402054776,5.57244543500701,7.03739204004904,11.3021074202815,12.9859516334974,12.1252431799457,7.81900777971734,8.25713568709582,7.60099855924331,7.63736494412091,5.53587988766987,6.70954241518601,4.64422965533745,5.85447228840512,3.27543845619266,3.2367443132357,3.55409859618945,3.14107130380836,4.40690909192096,5.59205381778233,1.12738587736838,5.38259565758324,5.46013018508422,5.44463327363333,4.90807329215378,3.71703476079712,4.5769323071844,4.55715346953825,6.92071673209692,4.59009829569411,4.03242008761012,16.7485893932934,3.44632865993279,5.6491026440655,7.7952493786677,10.2045216530464,12.715606706001,10.8175904567972,14.1781946087594,14.337235892637,11.43102099825,15.829711066484,13.0593560191268,13.7582933545671,13.557720653062,4.0811469050738,6.88156455459601,5.56225910978749,3.69346156000973,3.28422309854724,2.81523713176773,3.84618410961257,2.57242054894879,6.52043735245972,1.12950368523413,0.920650473014354,2.29158205375759,1.3748254587495,2.74033007908257,2.2661816921691,4.05013500139084,3.15224842256954,2.71885445390523,3.62432218226274,6.95375228813984,5.58634822761443,4.78054096111576,3.8897074730927,3.5634237646757,2.75765262675021,2.889207461421,2.26638562962784,4.1719497246936,3.03236654116557,3.04175159868288,3.01802146217722,3.37109426891577,3.3293079250532,2.92920891673628,4.28664322154766,1.97003354106254,2.89363830695558,3.29668720642645,3.67997300335993,3.42869252385415,2.30718548007139,3.33810665926249,3.48831399917588,2.72917203204459,3.46919892355874,2.37806364734604,3.41990624869196,2.71608227691724,3.36685362994643,2.60997039873183,2.9551344712669,3.6830793885272,2.78886314134739,3.85813221962283,2.49810577937946,2.8071793013449,2.36358159453128,3.25190164517034,5.51478547798789,4.86922454802885 | |phase1_expression=2.88267924788629,2.79180326111489,0.909998478779072,1.20985684522732,1.00179145989269,4.02910252588535,5.60670337429262,12.3958390503913,4.78681655315667,6.55380673701582,12.1564757440109,12.8433175982492,10.2720437958723,11.0149707047937,6.66219523631325,11.1361397064404,20.2872944657163,10.4102514568218,10.4206969540361,12.3072999021429,3.74190476664707,4.66667470644161,6.00759515019551,2.55987876469451,3.89995777814189,2.8711598205751,4.30761996159075,3.01659725760245,6.46079626151671,5.79669298447841,7.09537634096975,4.44521471421742,1.23012957516914,0,6.64358725427932,8.14549762256613,5.71674197534634,23.8563029520037,17.9707129240474,25.1291397107423,26.4704169613956,19.1252735788365,28.6451108288381,5.91715044485213,5.67710814829281,6.42413632565885,0,0.436050312760893,1.09843091367236,1.1665793944457,1.67983705950435,0,6.87908684836719,6.5282592781021,5.37750078627942,2.31533492432352,3.15186783932632,1.54701627683233,2.42779753031517,1.05798195854407,0,1.35537812827653,0,0,0,0,0.599200221036809,0.384218305321555,3.94020526772215,2.16009501330705,1.89292465216244,0.856952953211411,1.32521124570968,3.55223317723367,2.20444583341944,3.67687514644008,0,1.40456071893706,1.68967186581868,2.2420668914133,2.56165402086747,3.12548022334056,2.79182999001381,2.25105044012672,2.90316670775939,1.47314292736834,2.13557521198654,2.23679334990361,5.90664307998836,4.00529268565963,4.34796733052517,1.72084775396277,2.03991400112325,2.15881276655127,3.24888208723835,3.13618820968135,2.94933282276679,6.98764322570037,4.1565760736459,1.06001872353102,5.0703631119605,1.28326477414318,0,0,3.030874574157,5.06719730950197,4.04419556011827,3.76806803072898,11.9111426477699,3.85949561568544,3.29622120855658,3.04465478312141,4.15107895060905,3.46662073271032,3.29248379979973,2.63899841792318,2.71914464507811,2.4581890676385,18.5768215909474,3.23533699894818,7.28777010919299,7.75800405016355,9.31958806090611,2.04946557908083,1.8850203613211,4.59822699375465,9.70502508497954,13.197860081855,9.40319680340679,2.99581278809645,3.20250421973039,1.88481528169297,2.60736480288415,2.04572365864264,2.49345653471472,3.89379031362618,2.74966282395854,6.09594155989456,6.06534620240819,5.47148825304832,5.20481771850815,4.36813998423599,5.22180176435513,6.93242162044289,4.96666443804693,6.14945857367279,5.90320864726292,3.62184719034622,4.95806383745537,3.59301552318857,5.10258260075452,3.94552318369635,4.72680323683516,3.1342694986995,2.88094990971121,4.37875387000685,7.02213187313235,8.23513302767089,6.25159698670304,3.93538967817454,2.57978665979206,3.96136535214233,2.13070262026689,3.14822770795846,4.31947916084659,5.11574678450897,4.82892122519315,4.78737903705395,4.27855609775049,2.95501435342371,3.24275238183423,2.77779976108131,3.07370161407471,2.68412837520744,2.52347938276953,1.13195073617213,4.95628174475697,1.32225283331772,5.33220626338085,6.50262681209228,4.76809606891745,3.42861991859682,4.00280478920767,3.80451252225118,3.79623249235609,3.45867804920423,2.01068167040216,3.58121649674071,5.26403035221624,4.49409704327111,4.75503709724327,3.18626037206988,4.36236172192088,5.48392860526698,3.38123207019241,5.29493452397817,4.46090720485539,2.17421041659988,2.71917109634306,2.80459281161244,3.1399745568275,1.72756029490521,2.66807364378434,5.6727335943472,9.82794975566015,8.54476027062444,9.73728582664814,10.8529721888588,7.89340140522401,6.04161888646702,5.18832725680113,6.31491250332587,8.62609239164127,3.34926852901653,7.80094182786401,4.04126204715379,5.74071723270119,3.37710464954357,4.61882975416512,4.73728529426212,5.37784422258685,5.26209765903083,6.80601720036656,5.86271901046355,4.52282917683426,2.53673742215138,8.03939234941574,3.5434350343804,4.30527875375215,3.60499292374624,6.04397436530635,6.94315481191256,3.01582567878545,2.17562273527484,2.45882136509518,3.58717770196152,4.33486592967038,2.81308047821288,2.13115428989678,3.7870639080656,4.73262329124385,2.73307121007647,2.15423397732799,4.30143836314594,3.7875774594007,3.11384183867716,4.04810701674894,4.09158201075837,3.16230222357219,3.21321316421807,4.82596289708113,2.67098405500883,3.25773918707152,5.27904393512113,2.65490276679926,3.64170954232472,4.23252979750651,4.71512699389745,2.65771703592696,5.22639751504677,2.84271122485043,5.81653967164009,5.34746067577082,3.47640433729398,2.10837217149998,7.21948802737308,3.74483566329167,5.58189391497062,2.71653235943784,4.92975180572662,3.54680467284547,4.28085162244969,4.27827453565514,1.522324745573,4.92810586933792,2.96564899209348,4.41056796109924,2.14352128823924,4.52100394748536,5.97097956788743,3.22305328808468,4.92422699235184,2.62332752966866,3.52308073819968,9.7396402054776,5.57244543500701,7.03739204004904,11.3021074202815,12.9859516334974,12.1252431799457,7.81900777971734,8.25713568709582,7.60099855924331,7.63736494412091,5.53587988766987,6.70954241518601,4.64422965533745,5.85447228840512,3.27543845619266,3.2367443132357,3.55409859618945,3.14107130380836,4.40690909192096,5.59205381778233,1.12738587736838,5.38259565758324,5.46013018508422,5.44463327363333,4.90807329215378,3.71703476079712,4.5769323071844,4.55715346953825,6.92071673209692,4.59009829569411,4.03242008761012,16.7485893932934,3.44632865993279,5.6491026440655,7.7952493786677,10.2045216530464,12.715606706001,10.8175904567972,14.1781946087594,14.337235892637,11.43102099825,15.829711066484,13.0593560191268,13.7582933545671,13.557720653062,4.0811469050738,6.88156455459601,5.56225910978749,3.69346156000973,3.28422309854724,2.81523713176773,3.84618410961257,2.57242054894879,6.52043735245972,1.12950368523413,0.920650473014354,2.29158205375759,1.3748254587495,2.74033007908257,2.2661816921691,4.05013500139084,3.15224842256954,2.71885445390523,3.62432218226274,6.95375228813984,5.58634822761443,4.78054096111576,3.8897074730927,3.5634237646757,2.75765262675021,2.889207461421,2.26638562962784,4.1719497246936,3.03236654116557,3.04175159868288,3.01802146217722,3.37109426891577,3.3293079250532,2.92920891673628,4.28664322154766,1.97003354106254,2.89363830695558,3.29668720642645,3.67997300335993,3.42869252385415,2.30718548007139,3.33810665926249,3.48831399917588,2.72917203204459,3.46919892355874,2.37806364734604,3.41990624869196,2.71608227691724,3.36685362994643,2.60997039873183,2.9551344712669,3.6830793885272,2.78886314134739,3.85813221962283,2.49810577937946,2.8071793013449,2.36358159453128,3.25190164517034,5.51478547798789,4.86922454802885 | ||
|short_description=p3@Nfyb | |short_description=p3@Nfyb | ||
}} | }} |
Revision as of 09:40, 14 November 2012
Short description: | p3@Nfyb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nfyb_5end |
Coexpression cluster: | MCL_coexpression_mm9:411 |
Association with transcript: | 0bp_to_ENSMUST00000105309, ENSMUST00000143749_5end |
EntrezGene: | Nfyb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
foregut | 1.87e-10 | 80 |
hemopoietic organ | 2.72e-09 | 29 |
immune organ | 2.72e-09 | 29 |
subdivision of digestive tract | 3.14e-09 | 114 |
digestive system | 7.20e-09 | 116 |
digestive tract | 7.20e-09 | 116 |
primitive gut | 7.20e-09 | 116 |
endoderm-derived structure | 9.00e-09 | 118 |
endoderm | 9.00e-09 | 118 |
presumptive endoderm | 9.00e-09 | 118 |
mixed endoderm/mesoderm-derived structure | 1.02e-07 | 35 |
hematopoietic system | 1.34e-07 | 45 |
blood island | 1.34e-07 | 45 |
craniocervical region | 1.71e-07 | 36 |
hemolymphoid system | 1.87e-07 | 48 |
immune system | 1.87e-07 | 48 |
respiratory system | 3.17e-07 | 42 |
primordium | 3.28e-07 | 134 |
respiratory tract | 5.01e-07 | 41 |
gland of gut | 6.36e-07 | 24 |
endo-epithelium | 6.47e-07 | 69 |
anterior region of body | 9.63e-07 | 43 |
thymus | 9.88e-07 | 23 |
neck | 9.88e-07 | 23 |
respiratory system epithelium | 9.88e-07 | 23 |
hemolymphoid system gland | 9.88e-07 | 23 |
pharyngeal epithelium | 9.88e-07 | 23 |
thymic region | 9.88e-07 | 23 |
pharyngeal gland | 9.88e-07 | 23 |
entire pharyngeal arch endoderm | 9.88e-07 | 23 |
thymus primordium | 9.88e-07 | 23 |
early pharyngeal endoderm | 9.88e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.