FFCP PHASE1:Mm9::chr6:30530875..30530886,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr6:30530875..30530886,+ | |id=chr6:30530875..30530886,+ | ||
|ontology_enrichment_celltype=CL:0002609!1.03e-12!6;CL:0000117!3.30e-09!23;CL:0000337!3.30e-09!23;CL:0002613!1.35e-07!3;CL:0002608!1.49e-07!3 | |ontology_enrichment_celltype=CL:0002609!1.03e-12!6;CL:0000117!3.30e-09!23;CL:0000337!3.30e-09!23;CL:0002613!1.35e-07!3;CL:0002608!1.49e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,2.33e-17,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.98e-20!71;UBERON:0003075!6.98e-20!71;UBERON:0007284!6.98e-20!71;UBERON:0003080!8.59e-17!40;UBERON:0001049!6.73e-16!52;UBERON:0005068!6.73e-16!52;UBERON:0006241!6.73e-16!52;UBERON:0007135!6.73e-16!52;UBERON:0002616!1.20e-15!49;UBERON:0002780!1.26e-15!39;UBERON:0001890!1.26e-15!39;UBERON:0006240!1.26e-15!39;UBERON:0000955!3.21e-15!50;UBERON:0006238!3.21e-15!50;UBERON:0003056!4.00e-14!49;UBERON:0004121!9.22e-14!102;UBERON:0000924!9.22e-14!102;UBERON:0006601!9.22e-14!102;UBERON:0000033!2.19e-13!63;UBERON:0000007!3.31e-13!8;UBERON:0003296!3.31e-13!8;UBERON:0010133!3.31e-13!8;UBERON:0002369!5.77e-11!7;UBERON:0006858!5.77e-11!7;UBERON:0001017!9.51e-11!73;UBERON:0005743!9.51e-11!73;UBERON:0001894!2.62e-10!10;UBERON:0006222!2.62e-10!10;UBERON:0000073!2.65e-10!75;UBERON:0001016!2.65e-10!75;UBERON:0007811!3.23e-08!86;UBERON:0002791!5.67e-08!29;UBERON:0003528!5.67e-08!29;UBERON:0001893!5.67e-08!29;UBERON:0000153!7.63e-08!94;UBERON:0002342!2.06e-07!10;UBERON:0005062!2.06e-07!10;UBERON:0000369!4.28e-07!5;UBERON:0002435!4.28e-07!5;UBERON:0000204!4.28e-07!5;UBERON:0010082!4.28e-07!5 | |ontology_enrichment_uberon=UBERON:0002346!6.98e-20!71;UBERON:0003075!6.98e-20!71;UBERON:0007284!6.98e-20!71;UBERON:0003080!8.59e-17!40;UBERON:0001049!6.73e-16!52;UBERON:0005068!6.73e-16!52;UBERON:0006241!6.73e-16!52;UBERON:0007135!6.73e-16!52;UBERON:0002616!1.20e-15!49;UBERON:0002780!1.26e-15!39;UBERON:0001890!1.26e-15!39;UBERON:0006240!1.26e-15!39;UBERON:0000955!3.21e-15!50;UBERON:0006238!3.21e-15!50;UBERON:0003056!4.00e-14!49;UBERON:0004121!9.22e-14!102;UBERON:0000924!9.22e-14!102;UBERON:0006601!9.22e-14!102;UBERON:0000033!2.19e-13!63;UBERON:0000007!3.31e-13!8;UBERON:0003296!3.31e-13!8;UBERON:0010133!3.31e-13!8;UBERON:0002369!5.77e-11!7;UBERON:0006858!5.77e-11!7;UBERON:0001017!9.51e-11!73;UBERON:0005743!9.51e-11!73;UBERON:0001894!2.62e-10!10;UBERON:0006222!2.62e-10!10;UBERON:0000073!2.65e-10!75;UBERON:0001016!2.65e-10!75;UBERON:0007811!3.23e-08!86;UBERON:0002791!5.67e-08!29;UBERON:0003528!5.67e-08!29;UBERON:0001893!5.67e-08!29;UBERON:0000153!7.63e-08!94;UBERON:0002342!2.06e-07!10;UBERON:0005062!2.06e-07!10;UBERON:0000369!4.28e-07!5;UBERON:0002435!4.28e-07!5;UBERON:0000204!4.28e-07!5;UBERON:0010082!4.28e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,6.13e-15,8;UBERON:0003296,6.13e-15,8;UBERON:0010133,6.13e-15,8;UBERON:0001894,4.23e-12,10;UBERON:0006222,4.23e-12,10;UBERON:0000369,7.88e-11,5;UBERON:0002435,7.88e-11,5;UBERON:0000204,7.88e-11,5;UBERON:0010082,7.88e-11,5;UBERON:0002780,2.46e-08,39;UBERON:0001890,2.46e-08,39;UBERON:0006240,2.46e-08,39;UBERON:0003080,3.92e-08,40;UBERON:0002369,4.45e-08,7;UBERON:0006858,4.45e-08,7;UBERON:0002420,4.05e-07,8;UBERON:0007245,4.05e-07,8;UBERON:0010009,4.05e-07,8;UBERON:0010011,4.05e-07,8;UBERON:0000454,4.05e-07,8;UBERON:0002616,4.23e-07,46;UBERON:0000955,5.93e-07,47;UBERON:0006238,5.93e-07,47;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.829516898467821,0.135005938331691,0.841299845405528,0,0,0.979926393719632,0.958454710182364,0.919218786610021,0,0,0,1.05509030184155,0.823388792421687,1.56274011167028,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.593768556259299,0,1.21786191324856,0.461230994512117,1.65794904607885,0.705532242814229,0.628332956648377,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,5.17434735131018,2.35770738534752,0.709360934569094,0.535106452806212,0.493647061806363,1.522324745573,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.829516898467821,0.135005938331691,0.841299845405528,0,0,0.979926393719632,0.958454710182364,0.919218786610021,0,0,0,1.05509030184155,0.823388792421687,1.56274011167028,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.593768556259299,0,1.21786191324856,0.461230994512117,1.65794904607885,0.705532242814229,0.628332956648377,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,5.17434735131018,2.35770738534752,0.709360934569094,0.535106452806212,0.493647061806363,1.522324745573,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr6:30530875..30530886,+ | |short_description=p@chr6:30530875..30530886,+ | ||
}} | }} |
Revision as of 22:08, 14 November 2012
Short description: | p@chr6:30530875..30530886, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:30530875..30530886, + |
Coexpression cluster: | MCL_coexpression_mm9:1075 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 2.33e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 6.13e-15 | 8 |
gland of diencephalon | 6.13e-15 | 8 |
neuroendocrine gland | 6.13e-15 | 8 |
diencephalon | 4.23e-12 | 10 |
future diencephalon | 4.23e-12 | 10 |
corpus striatum | 7.88e-11 | 5 |
striatum | 7.88e-11 | 5 |
ventral part of telencephalon | 7.88e-11 | 5 |
future corpus striatum | 7.88e-11 | 5 |
regional part of forebrain | 2.46e-08 | 39 |
forebrain | 2.46e-08 | 39 |
future forebrain | 2.46e-08 | 39 |
anterior neural tube | 3.92e-08 | 40 |
adrenal gland | 4.45e-08 | 7 |
adrenal/interrenal gland | 4.45e-08 | 7 |
basal ganglion | 4.05e-07 | 8 |
nuclear complex of neuraxis | 4.05e-07 | 8 |
aggregate regional part of brain | 4.05e-07 | 8 |
collection of basal ganglia | 4.05e-07 | 8 |
cerebral subcortex | 4.05e-07 | 8 |
regional part of brain | 4.23e-07 | 46 |
brain | 5.93e-07 | 47 |
future brain | 5.93e-07 | 47 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.