FFCP PHASE1:Mm9::chr11:34934899..34935014,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=20564|HGNC=|MCL_coexpression_id=2664|UniProt=B2RX06,Q3UHN1,Q9WVB4,Q9Z0Y6|association_with_transcript=0bp_to_NM_011412,uc007ild.2_5end|description=CAGE_peak_2_at_Slit3_5end|id=chr11:34934899..34935014,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!5.51e-10!333;UBERON:0000464!8.33e-07!57;UBERON:0003102!9.33e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.03e-07,22;UBERON:0005153,9.74e-07,17|phase1_expression=1.12104192973356,0,1.36499771816861,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0,8.24919914465377,0,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.8296867136177,64.3743513243917,31.2029478674859,26.6013057078333,4.14247797122848,6.37089929929968,7.77719596297134,4.61955191363696,5.75010257459886,0,0,0.336093799142464,4.3734104126111,19.1977404758967,15.4701627683233,0,0.528990979272033,0.633831403506179,1.35537812827653,6.22506357277798,0.449949858640699,0,0.7104801149461,4.19440154725767,1.15265491596466,0.622137673850866,0.675029691658453,1.05162480675691,0.571301968807607,1.10434270475807,0.979926393719632,0.862609239164127,2.75765635983006,4.40463523997555,10.214987046815,2.91852413186863,1.31886287730194,0.365950574409639,0.52091337055676,2.51264699101243,3.37657566019008,9.77908785771585,1.47314292736834,0.854230084794618,0.745597783301202,0.302904773332736,2.72057616384428,2.31891590961342,1.72084775396277,0,0,0,0,3.08977724289854,0,0.779358013808606,0,5.0703631119605,0,0,0,0,0,0,2.51204535381932,2.84831672011889,10.6878340126674,6.07198643681475,4.56698217468212,4.38169444786511,2.56228488939458,9.17191915658498,4.90099706185734,12.3597483867187,26.6062816732637,5.30766331169925,11.3236794963186,8.83366073841574,12.6067565815158,0,12.5895742714965,15.7085030110091,1.78819938646014,0,0,0,2.39665023047716,22.4175295381127,2.63874139437015,15.9918374576894,16.6215047264715,7.48036960414416,13.7905073607594,14.5630290305952,12.067476149179,3.53811861807145,4.41927897361595,2.08192708740326,2.06911893990126,2.16074555766419,2.56198190320716,4.21826294738233,2.562274405697,2.24884138943349,5.95017752699736,3.66465587985832,2.83659120251729,5.45448484908241,4.82230611340665,9.73165372289593,11.8405736617537,9.87754254758129,3.58261680273288,0,0,0,5.17814431338755,2.81431271977315,4.32148947506436,5.20838418287463,2.75469924446365,4.78228049950873,3.48800917125612,4.02410102099429,4.78737903705395,4.77223564749093,3.447516745661,6.32336714457675,5.55559952216263,5.48875288227627,5.2340503316545,39.9550902271842,5.76265829323993,0.991256348951394,1.05780226665418,4.26576501070468,3.48355007790658,4.51036114627327,3.83198696784351,3.7804267453628,3.80451252225118,1.89811624617805,3.95277491337626,3.77002813200404,3.78017296878187,4.67913809085888,6.29173586057955,2.37751854862164,1.7922714592893,3.22435431620239,3.77020091612105,1.1270773567308,2.44381593414377,2.71533482034676,4.34842083319975,3.35153646758564,3.39503340353085,1.255989822731,2.46794327843601,0,1.83529616287703,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,1.2731292589071,1.72617682470486,1.13494658742525,0.274561413188081,1.43768206527355,0.744281895337007,0,0,0.538192240565737,0,19.2143317773269,3.97931964718018,3.7481944581666,6.95954851678271,5.86725620721255,7.87279409976534,9.28370199455454,16.9766273636285,11.9802709520705,17.2742457926044,18.018388858296,20.1551877100358,16.9231282228578,17.3578870297814,0,0,7.37646409528554,12.6930903300177,2.24770825982909,1.64096361229084,12.2951209032507,8.33154059774431,1.89304931649754,1.56175497718655,1.07711698866399,0.238968797952552,0.445597348164788,0.849229592366497,2.42886421004937,1.16902343164525,2.37172666767914,14.7807805554031,12.6326675835359,9.97167380536629,12.8680697889325,13.6925202067204,11.9470624505967,5.58395463156457,3.93020624054176,6.97838795096823,10.0402643579463,11.9899707698132,11.1124166062335,21.0849563096953,18.1813662976208,9.16506598013866,6.32511651449993,10.3135543248187,2.38307724027652,1.98067203434441,2.58717367565509,3.42939256050548,3.54680467284547,7.13475270408282,4.93647061806363,2.43571959291679,27.6912615515178,7.83778662196135,7.27743713581374,31.4932743118227,29.2250612319589,12.4244625352001,11.340372680298,12.4747083806247,4.08073171281791,1.29797711407357,2.22132145037209,7.63631411463923,5.74103034846106,1.50694765603753,2.59719032669948,1.83022538565218,0,0,0,4.77335309007557,4.74503990371703,5.28630614529807,4.32021363287205,4.59994251231831,3.9305261474312,8.4964538222437,7.52146447100557,4.71160695571253,4.40690909192096,5.59205381778233,1.12738587736838,1.64468200648377,1.48912641411388,2.13896307178452,3.87479470433193,5.23763989021412,6.92407708009948,10.54655517236,11.5345278868282,2.17425708743405,2.01621004380506,2.8441000856536,4.05450430580328,1.95150818613172,1.42912905275575,2.14832034800978,1.58945083825012,1.32214994471966,0.590758108698309,0.706765149637033,0.609654453239999,0.806609481094724,0.682205165178267,0.769694733122636,1.63627663054197,9.29594572822367,0.221985953374065,0.0897138566094757,0,30.9103350451505,60.6214395707318,7.69236821922513,9.21784030039983,5.01572104035363,14.1187960654267,10.1271552031579,14.8952833494243,25.0905646221784,10.9613203163303,15.107877947794,14.8504950050997,17.1122057225204,18.1256963593682,21.7459330935764,0.31136204275253,3.99024873401031,3.07320490357441,5.34834777550247,1.04806581313991,1.65459157605013,4.66718128383392,5.15087643097235,4.81378814387723,4.54854981174835,5.57654459758527,5.84741658296836,5.89941497060259,6.59459069770154,5.45636955078326,7.1444053692461,7.88013416425017,7.5234595980845,5.35711671044299,4.85756436443511,6.17164654293748,4.43689515398344,5.7224685587357,5.37781741539616,4.70546902076653,6.51532480765909,5.67076715905595,8.94437018888666,6.65440157844723,9.53941861818155,6.64356101495375,7.88035859004508,5.32000356120596,4.95797891795091,9.25951732709479,9.74261253957989,7.95367468714389,7.30561583764214,9.75570493551101,9.9266138603782,9.50658126043728|short_description=p2@Slit3}} | ||
|EntrezGene=20564 | |||
|HGNC= | |||
|MCL_coexpression_id=2664 | |||
|UniProt=B2RX06,Q3UHN1,Q9WVB4,Q9Z0Y6 | |||
|association_with_transcript=0bp_to_NM_011412,uc007ild.2_5end | |||
|description=CAGE_peak_2_at_Slit3_5end | |||
|id=chr11:34934899..34935014,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.51e-10!333;UBERON:0000464!8.33e-07!57;UBERON:0003102!9.33e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.03e-07,22;UBERON:0005153,9.74e-07,17 | |||
|phase1_expression=1.12104192973356,0,1.36499771816861,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0,8.24919914465377,0,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.8296867136177,64.3743513243917,31.2029478674859,26.6013057078333,4.14247797122848,6.37089929929968,7.77719596297134,4.61955191363696,5.75010257459886,0,0,0.336093799142464,4.3734104126111,19.1977404758967,15.4701627683233,0,0.528990979272033,0.633831403506179,1.35537812827653,6.22506357277798,0.449949858640699,0,0.7104801149461,4.19440154725767,1.15265491596466,0.622137673850866,0.675029691658453,1.05162480675691,0.571301968807607,1.10434270475807,0.979926393719632,0.862609239164127,2.75765635983006,4.40463523997555,10.214987046815,2.91852413186863,1.31886287730194,0.365950574409639,0.52091337055676,2.51264699101243,3.37657566019008,9.77908785771585,1.47314292736834,0.854230084794618,0.745597783301202,0.302904773332736,2.72057616384428,2.31891590961342,1.72084775396277,0,0,0,0,3.08977724289854,0,0.779358013808606,0,5.0703631119605,0,0,0,0,0,0,2.51204535381932,2.84831672011889,10.6878340126674,6.07198643681475,4.56698217468212,4.38169444786511,2.56228488939458,9.17191915658498,4.90099706185734,12.3597483867187,26.6062816732637,5.30766331169925,11.3236794963186,8.83366073841574,12.6067565815158,0,12.5895742714965,15.7085030110091,1.78819938646014,0,0,0,2.39665023047716,22.4175295381127,2.63874139437015,15.9918374576894,16.6215047264715,7.48036960414416,13.7905073607594,14.5630290305952,12.067476149179,3.53811861807145,4.41927897361595,2.08192708740326,2.06911893990126,2.16074555766419,2.56198190320716,4.21826294738233,2.562274405697,2.24884138943349,5.95017752699736,3.66465587985832,2.83659120251729,5.45448484908241,4.82230611340665,9.73165372289593,11.8405736617537,9.87754254758129,3.58261680273288,0,0,0,5.17814431338755,2.81431271977315,4.32148947506436,5.20838418287463,2.75469924446365,4.78228049950873,3.48800917125612,4.02410102099429,4.78737903705395,4.77223564749093,3.447516745661,6.32336714457675,5.55559952216263,5.48875288227627,5.2340503316545,39.9550902271842,5.76265829323993,0.991256348951394,1.05780226665418,4.26576501070468,3.48355007790658,4.51036114627327,3.83198696784351,3.7804267453628,3.80451252225118,1.89811624617805,3.95277491337626,3.77002813200404,3.78017296878187,4.67913809085888,6.29173586057955,2.37751854862164,1.7922714592893,3.22435431620239,3.77020091612105,1.1270773567308,2.44381593414377,2.71533482034676,4.34842083319975,3.35153646758564,3.39503340353085,1.255989822731,2.46794327843601,0,1.83529616287703,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,1.2731292589071,1.72617682470486,1.13494658742525,0.274561413188081,1.43768206527355,0.744281895337007,0,0,0.538192240565737,0,19.2143317773269,3.97931964718018,3.7481944581666,6.95954851678271,5.86725620721255,7.87279409976534,9.28370199455454,16.9766273636285,11.9802709520705,17.2742457926044,18.018388858296,20.1551877100358,16.9231282228578,17.3578870297814,0,0,7.37646409528554,12.6930903300177,2.24770825982909,1.64096361229084,12.2951209032507,8.33154059774431,1.89304931649754,1.56175497718655,1.07711698866399,0.238968797952552,0.445597348164788,0.849229592366497,2.42886421004937,1.16902343164525,2.37172666767914,14.7807805554031,12.6326675835359,9.97167380536629,12.8680697889325,13.6925202067204,11.9470624505967,5.58395463156457,3.93020624054176,6.97838795096823,10.0402643579463,11.9899707698132,11.1124166062335,21.0849563096953,18.1813662976208,9.16506598013866,6.32511651449993,10.3135543248187,2.38307724027652,1.98067203434441,2.58717367565509,3.42939256050548,3.54680467284547,7.13475270408282,4.93647061806363,2.43571959291679,27.6912615515178,7.83778662196135,7.27743713581374,31.4932743118227,29.2250612319589,12.4244625352001,11.340372680298,12.4747083806247,4.08073171281791,1.29797711407357,2.22132145037209,7.63631411463923,5.74103034846106,1.50694765603753,2.59719032669948,1.83022538565218,0,0,0,4.77335309007557,4.74503990371703,5.28630614529807,4.32021363287205,4.59994251231831,3.9305261474312,8.4964538222437,7.52146447100557,4.71160695571253,4.40690909192096,5.59205381778233,1.12738587736838,1.64468200648377,1.48912641411388,2.13896307178452,3.87479470433193,5.23763989021412,6.92407708009948,10.54655517236,11.5345278868282,2.17425708743405,2.01621004380506,2.8441000856536,4.05450430580328,1.95150818613172,1.42912905275575,2.14832034800978,1.58945083825012,1.32214994471966,0.590758108698309,0.706765149637033,0.609654453239999,0.806609481094724,0.682205165178267,0.769694733122636,1.63627663054197,9.29594572822367,0.221985953374065,0.0897138566094757,0,30.9103350451505,60.6214395707318,7.69236821922513,9.21784030039983,5.01572104035363,14.1187960654267,10.1271552031579,14.8952833494243,25.0905646221784,10.9613203163303,15.107877947794,14.8504950050997,17.1122057225204,18.1256963593682,21.7459330935764,0.31136204275253,3.99024873401031,3.07320490357441,5.34834777550247,1.04806581313991,1.65459157605013,4.66718128383392,5.15087643097235,4.81378814387723,4.54854981174835,5.57654459758527,5.84741658296836,5.89941497060259,6.59459069770154,5.45636955078326,7.1444053692461,7.88013416425017,7.5234595980845,5.35711671044299,4.85756436443511,6.17164654293748,4.43689515398344,5.7224685587357,5.37781741539616,4.70546902076653,6.51532480765909,5.67076715905595,8.94437018888666,6.65440157844723,9.53941861818155,6.64356101495375,7.88035859004508,5.32000356120596,4.95797891795091,9.25951732709479,9.74261253957989,7.95367468714389,7.30561583764214,9.75570493551101,9.9266138603782,9.50658126043728 | |||
|short_description=p2@Slit3 | |||
}} | |||
Revision as of 19:33, 12 September 2013
| Short description: | p2@Slit3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Slit3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2664 |
| Association with transcript: | 0bp_to_NM_011412, uc007ild.2_5end |
| EntrezGene: | Slit3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| surface structure | 4.03e-07 | 22 |
| epithelial bud | 9.74e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
