FFCP PHASE1:Mm9::chr2:5769166..5769180,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53893|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=0bp_to_ENSMUST00000128604_5end|description=CAGE_peak_3_at_Nudt5_5end|id=chr2:5769166..5769180,+|ontology_enrichment_celltype=CL:0002563!7.47e-14!9;CL:0002251!7.47e-14!9;CL:0000239!1.09e-11!6;CL:0000677!1.09e-11!6;CL:0000212!1.09e-11!6;CL:0000584!1.09e-11!6;CL:0000066!8.78e-11!25;CL:0002076!4.29e-10!15;CL:0000075!5.79e-10!7;CL:0000473!7.80e-09!3;CL:0000627!7.80e-09!3;CL:0000682!7.80e-09!3;CL:0000223!3.05e-07!20|ontology_enrichment_celltype_v019_2=CL:0000682,3.83e-13,3;CL:0000239,3.37e-12,6;CL:0000677,3.37e-12,6;CL:0000584,3.37e-12,6;CL:0000075,1.79e-10,7;CL:0002563,3.64e-08,9;CL:0002251,3.64e-08,9;CL:0000066,9.00e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.37e-28!15;UBERON:0001242!2.55e-23!13;UBERON:0000060!2.55e-23!13;UBERON:0001262!2.55e-23!13;UBERON:0004786!2.55e-23!13;UBERON:0000160!7.39e-21!43;UBERON:0004923!3.87e-19!24;UBERON:0005409!6.05e-14!59;UBERON:0003350!7.47e-14!9;UBERON:0004808!7.47e-14!9;UBERON:0001277!7.47e-14!9;UBERON:0000485!3.80e-11!11;UBERON:0000331!1.19e-08!3;UBERON:0002116!1.19e-08!3;UBERON:0001204!1.19e-08!3;UBERON:0001168!1.19e-08!3;UBERON:0004119!3.10e-08!130;UBERON:0000925!3.10e-08!130;UBERON:0006595!3.10e-08!130;UBERON:0001007!1.41e-07!128;UBERON:0001555!1.41e-07!128;UBERON:0007026!1.41e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.77e-25,31;UBERON:0000344,2.63e-22,15;UBERON:0001242,5.38e-16,13;UBERON:0001262,5.38e-16,13;UBERON:0004786,5.38e-16,13;UBERON:0005409,8.63e-16,47;UBERON:0004923,1.87e-13,24;UBERON:0002108,7.27e-10,4;UBERON:0001962,3.24e-09,2;UBERON:0001961,3.24e-09,2;UBERON:0001744,3.24e-09,2;UBERON:0003350,3.64e-08,9;UBERON:0004808,3.64e-08,9;UBERON:0001277,3.64e-08,9;UBERON:0001007,7.60e-07,116;UBERON:0001555,7.60e-07,116;UBERON:0007026,7.60e-07,116|phase1_expression=0,10.1202868215415,14.1049764210756,36.2957053568196,62.1110705133471,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27974995218242,9.86459908588831,5.16808767703518,10.7690499039769,8.40337807474967,0.950117097281869,22.4306815486338,2.88249663851896,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,10.6191008138726,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,25.2902484656505,0,0,0,0,0,0,0,0,0,0,0,0,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,82.9351145289333,14.2803305998314,0,0,0,0,0,0,4.74529061544512,0.329397909448022,0,0,0.38992817423824,10.7858329038507,5.40345124686736,10.7536287557358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Nudt5}} | ||
|EntrezGene=53893 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000128604_5end | |||
|description=CAGE_peak_3_at_Nudt5_5end | |||
|id=chr2:5769166..5769180,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.47e-14!9;CL:0002251!7.47e-14!9;CL:0000239!1.09e-11!6;CL:0000677!1.09e-11!6;CL:0000212!1.09e-11!6;CL:0000584!1.09e-11!6;CL:0000066!8.78e-11!25;CL:0002076!4.29e-10!15;CL:0000075!5.79e-10!7;CL:0000473!7.80e-09!3;CL:0000627!7.80e-09!3;CL:0000682!7.80e-09!3;CL:0000223!3.05e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.83e-13,3;CL:0000239,3.37e-12,6;CL:0000677,3.37e-12,6;CL:0000584,3.37e-12,6;CL:0000075,1.79e-10,7;CL:0002563,3.64e-08,9;CL:0002251,3.64e-08,9;CL:0000066,9.00e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.37e-28!15;UBERON:0001242!2.55e-23!13;UBERON:0000060!2.55e-23!13;UBERON:0001262!2.55e-23!13;UBERON:0004786!2.55e-23!13;UBERON:0000160!7.39e-21!43;UBERON:0004923!3.87e-19!24;UBERON:0005409!6.05e-14!59;UBERON:0003350!7.47e-14!9;UBERON:0004808!7.47e-14!9;UBERON:0001277!7.47e-14!9;UBERON:0000485!3.80e-11!11;UBERON:0000331!1.19e-08!3;UBERON:0002116!1.19e-08!3;UBERON:0001204!1.19e-08!3;UBERON:0001168!1.19e-08!3;UBERON:0004119!3.10e-08!130;UBERON:0000925!3.10e-08!130;UBERON:0006595!3.10e-08!130;UBERON:0001007!1.41e-07!128;UBERON:0001555!1.41e-07!128;UBERON:0007026!1.41e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.77e-25,31;UBERON:0000344,2.63e-22,15;UBERON:0001242,5.38e-16,13;UBERON:0001262,5.38e-16,13;UBERON:0004786,5.38e-16,13;UBERON:0005409,8.63e-16,47;UBERON:0004923,1.87e-13,24;UBERON:0002108,7.27e-10,4;UBERON:0001962,3.24e-09,2;UBERON:0001961,3.24e-09,2;UBERON:0001744,3.24e-09,2;UBERON:0003350,3.64e-08,9;UBERON:0004808,3.64e-08,9;UBERON:0001277,3.64e-08,9;UBERON:0001007,7.60e-07,116;UBERON:0001555,7.60e-07,116;UBERON:0007026,7.60e-07,116 | |||
|phase1_expression=0,10.1202868215415,14.1049764210756,36.2957053568196,62.1110705133471,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27974995218242,9.86459908588831,5.16808767703518,10.7690499039769,8.40337807474967,0.950117097281869,22.4306815486338,2.88249663851896,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,10.6191008138726,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,25.2902484656505,0,0,0,0,0,0,0,0,0,0,0,0,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,82.9351145289333,14.2803305998314,0,0,0,0,0,0,4.74529061544512,0.329397909448022,0,0,0.38992817423824,10.7858329038507,5.40345124686736,10.7536287557358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Nudt5 | |||
}} |
Revision as of 00:10, 14 September 2013
Short description: | p3@Nudt5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nudt5_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000128604_5end |
EntrezGene: | Nudt5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.83e-13 | 3 |
brush border epithelial cell | 3.37e-12 | 6 |
gut absorptive cell | 3.37e-12 | 6 |
enterocyte | 3.37e-12 | 6 |
columnar/cuboidal epithelial cell | 1.79e-10 | 7 |
intestinal epithelial cell | 3.64e-08 | 9 |
epithelial cell of alimentary canal | 3.64e-08 | 9 |
epithelial cell | 9.00e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.77e-25 | 31 |
mucosa | 2.63e-22 | 15 |
intestinal mucosa | 5.38e-16 | 13 |
wall of intestine | 5.38e-16 | 13 |
gastrointestinal system mucosa | 5.38e-16 | 13 |
gastrointestinal system | 8.63e-16 | 47 |
organ component layer | 1.87e-13 | 24 |
small intestine | 7.27e-10 | 4 |
gut-associated lymphoid tissue | 3.24e-09 | 2 |
mucosa-associated lymphoid tissue | 3.24e-09 | 2 |
lymphoid tissue | 3.24e-09 | 2 |
epithelium of mucosa | 3.64e-08 | 9 |
gastrointestinal system epithelium | 3.64e-08 | 9 |
intestinal epithelium | 3.64e-08 | 9 |
digestive system | 7.60e-07 | 116 |
digestive tract | 7.60e-07 | 116 |
primitive gut | 7.60e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.