FFCP PHASE1:Mm9::chr11:98950576..98950589,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=217169|HGNC=|MCL_coexpression_id=2753|UniProt=|association_with_transcript=9bp_to_ENSMUST00000123303_5end|description=CAGE_peak_2_at_Tns4_5end|id=chr11:98950576..98950589,-|ontology_enrichment_celltype=CL:0002563!1.91e-07!9;CL:0002251!1.91e-07!9;CL:0002076!3.67e-07!15|ontology_enrichment_celltype_v019_2=CL:0002076,4.81e-12,15;CL:0002563,1.95e-11,9;CL:0002251,1.95e-11,9;CL:0000066,7.16e-10,25;CL:0000223,2.84e-08,20;CL:0000239,3.70e-08,6;CL:0000677,3.70e-08,6;CL:0000584,3.70e-08,6;CL:0000075,7.23e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.94e-12!15;UBERON:0001242!1.69e-10!13;UBERON:0000060!1.69e-10!13;UBERON:0001262!1.69e-10!13;UBERON:0004786!1.69e-10!13;UBERON:0005409!4.88e-10!59;UBERON:0000160!2.84e-09!43;UBERON:0004923!6.08e-09!24;UBERON:0003350!1.91e-07!9;UBERON:0004808!1.91e-07!9;UBERON:0001277!1.91e-07!9;UBERON:0007023!3.78e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.25e-19,31;UBERON:0000344,5.46e-19,15;UBERON:0005409,5.59e-17,47;UBERON:0001242,1.51e-16,13;UBERON:0001262,1.51e-16,13;UBERON:0004786,1.51e-16,13;UBERON:0004923,6.09e-16,24;UBERON:0007023,4.08e-12,51;UBERON:0003350,1.95e-11,9;UBERON:0004808,1.95e-11,9;UBERON:0001277,1.95e-11,9;UBERON:0004119,5.73e-11,118;UBERON:0000925,5.73e-11,118;UBERON:0006595,5.73e-11,118;UBERON:0001007,1.29e-09,116;UBERON:0001555,1.29e-09,116;UBERON:0007026,1.29e-09,116;UBERON:0000485,5.30e-09,11;UBERON:0000161,1.78e-08,5;UBERON:0004921,2.13e-08,114;UBERON:0000014,3.33e-08,5;UBERON:0001003,3.33e-08,5;UBERON:0002097,3.33e-08,5;UBERON:0002199,3.33e-08,5;UBERON:0007029,3.33e-08,5;UBERON:0007376,3.33e-08,5;UBERON:0002416,3.33e-08,5;UBERON:0007383,3.33e-08,5;UBERON:0003102,9.23e-08,22;UBERON:0002108,7.47e-07,4|phase1_expression=0,6.97950815278722,10.4649825059593,4.53696316960245,4.50806156951712,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,5.91971964335605,5.04700418347774,6.31655160526522,2.58457197695445,2.15471232685889,24.893067948785,13.8616571367962,5.54326276638262,0,0,0,2.88851619751275,3.15845826181135,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,13.2059535016841,17.2284708523067,14.6602089054287,1.48439043634778,0,0,0,0,0,0,0,0,9.14621380617183,0,0,0,0,0,31.6865994070808,0,0,14.3055950916811,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0.505445516867349,1.47309299120532,0,0,0.360124259610698,0.452114453507145,0.408218994907967,0,0.187403449119458,0.258703370739016,0.431135985865684,0.378212160335639,0.351902248327898,0,0.834141747676794,2.089512999133,1.4404749548556,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0,1.65209391491899,2.3800550999719,0,0,0.38660238396628,0,0.22237804384487,0.570676878337677,6.64340686162316,0.494096864172033,1.00534083520108,0.198956472041151,1.36474860983384,9.88701349519644,6.91641759599022,7.36822711041159,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0,0,0,0,1.96705709207614,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,1.31976098378028,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81606049676452,22.8778636532926,1.98475558249466,49.795648388327,5.48979050766079,5.48847616846218,6.92359595218192,11.1615811826642,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.648032044930808,1.25452977608681,0.436725127492355,1.48350781023303,1.32245529160537,1.83229159388821,23.9787700589817,29.8242870281724,0,0,0,0,0.129159823477731,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0,0,0,0,0,0,0,0.302478555410522,0.0974578807397524,0,0.584384510907845,11.789979947991,7.99149432146633,2.33256027184637,8.562115434568,12.5573236120924,0,2.01466786693992,30.4403098292273,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.222246727801615,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.470546902076653,0,0,0.789209134313529,0.135804113845862,0.561142271657738,0.237270036248348,0.394017929502254,0.818462086339379,0.309873682371932,0.578719832943424,0.249810577937946,1.63752125911786,0.644613162144895,0.191288332068843,1.54413993383661,0|short_description=p2@Tns4}} | ||
|EntrezGene=217169 | |||
|HGNC= | |||
|MCL_coexpression_id=2753 | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENSMUST00000123303_5end | |||
|description=CAGE_peak_2_at_Tns4_5end | |||
|id=chr11:98950576..98950589,- | |||
|ontology_enrichment_celltype=CL:0002563!1.91e-07!9;CL:0002251!1.91e-07!9;CL:0002076!3.67e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.81e-12,15;CL:0002563,1.95e-11,9;CL:0002251,1.95e-11,9;CL:0000066,7.16e-10,25;CL:0000223,2.84e-08,20;CL:0000239,3.70e-08,6;CL:0000677,3.70e-08,6;CL:0000584,3.70e-08,6;CL:0000075,7.23e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.94e-12!15;UBERON:0001242!1.69e-10!13;UBERON:0000060!1.69e-10!13;UBERON:0001262!1.69e-10!13;UBERON:0004786!1.69e-10!13;UBERON:0005409!4.88e-10!59;UBERON:0000160!2.84e-09!43;UBERON:0004923!6.08e-09!24;UBERON:0003350!1.91e-07!9;UBERON:0004808!1.91e-07!9;UBERON:0001277!1.91e-07!9;UBERON:0007023!3.78e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.25e-19,31;UBERON:0000344,5.46e-19,15;UBERON:0005409,5.59e-17,47;UBERON:0001242,1.51e-16,13;UBERON:0001262,1.51e-16,13;UBERON:0004786,1.51e-16,13;UBERON:0004923,6.09e-16,24;UBERON:0007023,4.08e-12,51;UBERON:0003350,1.95e-11,9;UBERON:0004808,1.95e-11,9;UBERON:0001277,1.95e-11,9;UBERON:0004119,5.73e-11,118;UBERON:0000925,5.73e-11,118;UBERON:0006595,5.73e-11,118;UBERON:0001007,1.29e-09,116;UBERON:0001555,1.29e-09,116;UBERON:0007026,1.29e-09,116;UBERON:0000485,5.30e-09,11;UBERON:0000161,1.78e-08,5;UBERON:0004921,2.13e-08,114;UBERON:0000014,3.33e-08,5;UBERON:0001003,3.33e-08,5;UBERON:0002097,3.33e-08,5;UBERON:0002199,3.33e-08,5;UBERON:0007029,3.33e-08,5;UBERON:0007376,3.33e-08,5;UBERON:0002416,3.33e-08,5;UBERON:0007383,3.33e-08,5;UBERON:0003102,9.23e-08,22;UBERON:0002108,7.47e-07,4 | |||
|phase1_expression=0,6.97950815278722,10.4649825059593,4.53696316960245,4.50806156951712,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,5.91971964335605,5.04700418347774,6.31655160526522,2.58457197695445,2.15471232685889,24.893067948785,13.8616571367962,5.54326276638262,0,0,0,2.88851619751275,3.15845826181135,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,13.2059535016841,17.2284708523067,14.6602089054287,1.48439043634778,0,0,0,0,0,0,0,0,9.14621380617183,0,0,0,0,0,31.6865994070808,0,0,14.3055950916811,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0.505445516867349,1.47309299120532,0,0,0.360124259610698,0.452114453507145,0.408218994907967,0,0.187403449119458,0.258703370739016,0.431135985865684,0.378212160335639,0.351902248327898,0,0.834141747676794,2.089512999133,1.4404749548556,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0,1.65209391491899,2.3800550999719,0,0,0.38660238396628,0,0.22237804384487,0.570676878337677,6.64340686162316,0.494096864172033,1.00534083520108,0.198956472041151,1.36474860983384,9.88701349519644,6.91641759599022,7.36822711041159,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0,0,0,0,1.96705709207614,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,1.31976098378028,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81606049676452,22.8778636532926,1.98475558249466,49.795648388327,5.48979050766079,5.48847616846218,6.92359595218192,11.1615811826642,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.648032044930808,1.25452977608681,0.436725127492355,1.48350781023303,1.32245529160537,1.83229159388821,23.9787700589817,29.8242870281724,0,0,0,0,0.129159823477731,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0,0,0,0,0,0,0,0.302478555410522,0.0974578807397524,0,0.584384510907845,11.789979947991,7.99149432146633,2.33256027184637,8.562115434568,12.5573236120924,0,2.01466786693992,30.4403098292273,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.222246727801615,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.470546902076653,0,0,0.789209134313529,0.135804113845862,0.561142271657738,0.237270036248348,0.394017929502254,0.818462086339379,0.309873682371932,0.578719832943424,0.249810577937946,1.63752125911786,0.644613162144895,0.191288332068843,1.54413993383661,0 | |||
|short_description=p2@Tns4 | |||
}} |
Revision as of 21:52, 12 September 2013
Short description: | p2@Tns4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tns4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2753 |
Association with transcript: | 9bp_to_ENSMUST00000123303_5end |
EntrezGene: | Tns4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.81e-12 | 15 |
intestinal epithelial cell | 1.95e-11 | 9 |
epithelial cell of alimentary canal | 1.95e-11 | 9 |
epithelial cell | 7.16e-10 | 25 |
endodermal cell | 2.84e-08 | 20 |
brush border epithelial cell | 3.70e-08 | 6 |
gut absorptive cell | 3.70e-08 | 6 |
enterocyte | 3.70e-08 | 6 |
columnar/cuboidal epithelial cell | 7.23e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.25e-19 | 31 |
mucosa | 5.46e-19 | 15 |
gastrointestinal system | 5.59e-17 | 47 |
intestinal mucosa | 1.51e-16 | 13 |
wall of intestine | 1.51e-16 | 13 |
gastrointestinal system mucosa | 1.51e-16 | 13 |
organ component layer | 6.09e-16 | 24 |
adult organism | 4.08e-12 | 51 |
epithelium of mucosa | 1.95e-11 | 9 |
gastrointestinal system epithelium | 1.95e-11 | 9 |
intestinal epithelium | 1.95e-11 | 9 |
endoderm-derived structure | 5.73e-11 | 118 |
endoderm | 5.73e-11 | 118 |
presumptive endoderm | 5.73e-11 | 118 |
digestive system | 1.29e-09 | 116 |
digestive tract | 1.29e-09 | 116 |
primitive gut | 1.29e-09 | 116 |
simple columnar epithelium | 5.30e-09 | 11 |
orifice | 1.78e-08 | 5 |
subdivision of digestive tract | 2.13e-08 | 114 |
zone of skin | 3.33e-08 | 5 |
skin epidermis | 3.33e-08 | 5 |
skin of body | 3.33e-08 | 5 |
integument | 3.33e-08 | 5 |
surface | 3.33e-08 | 5 |
outer epithelium | 3.33e-08 | 5 |
integumental system | 3.33e-08 | 5 |
enveloping layer of ectoderm | 3.33e-08 | 5 |
surface structure | 9.23e-08 | 22 |
small intestine | 7.47e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.