FFCP PHASE1:Mm9::chr16:56886068..56886081,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56277|HGNC=|UniProt=Q8BFU6|association_with_transcript=194bp_to_NM_019631,uc007zmx.1_5end|description=CAGE_peak_6_at_Tmem45a_5end|id=chr16:56886068..56886081,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,2.30e-13,6;CL:0000187,2.30e-13,6;CL:0000056,2.30e-13,6;CL:0000222,2.44e-11,7;CL:0000355,1.23e-08,9;CL:0002494,6.49e-08,3;CL:0000737,6.49e-08,3;CL:0000746,6.49e-08,3;CL:0000513,6.49e-08,3;CL:0000192,4.56e-07,3;CL:0000359,4.56e-07,3;CL:0002539,4.56e-07,3;CL:0000514,4.56e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!2.62e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0000310,5.98e-09,6;UBERON:0001443,5.98e-09,6;UBERON:0001134,1.23e-08,9;UBERON:0002036,1.23e-08,9;UBERON:0002385,1.23e-08,9;UBERON:0000486,1.23e-08,9;UBERON:0007503,1.23e-08,9;UBERON:0001015,1.23e-08,9;UBERON:0002329,1.23e-08,9;UBERON:0003082,1.23e-08,9;UBERON:0003059,1.23e-08,9;UBERON:0007282,1.23e-08,9;UBERON:0004290,1.23e-08,9;UBERON:0009618,1.23e-08,9;UBERON:0000383,1.08e-07,10;UBERON:0002102,2.35e-07,7;UBERON:0004710,2.35e-07,7;UBERON:0005419,2.35e-07,7;UBERON:0005417,2.35e-07,7;UBERON:0005729,2.35e-07,7;UBERON:0001135,4.56e-07,3;UBERON:0004237,4.56e-07,3;UBERON:0004695,4.56e-07,3;UBERON:0002111,4.56e-07,3;UBERON:0004178,4.56e-07,3;UBERON:0007524,6.41e-07,11;UBERON:0003077,6.41e-07,11;UBERON:0007285,6.41e-07,11|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.4192770370732,2.75320128242522,0,0,0,0.194429899074283,0,0,0,0,0,7.71778308107841,2.57880095944881,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0.153606533256243,0.263772575460388,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,4.94247935476367,5.19572009205738,2.47337702157238,0,0,0,0,0,0,0,0,0,0,0.693941307064543,0,0,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0,1.61766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12023300235348,0.248813941220186,0,0,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0.189106080167819,1.23165786914764,1.09597866213787,1.11218899690239,2.78601733217733,2.46938563689532,1.19420560091096,0,0,0,0.414251545071004,0,0.720248245844059,0.23674473558521,0.393528463494808,0.308534225774757,0.697601834251224,0.268273401399619,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.438599962275997,0.219550115291051,0.268412837520744,0,0.102904612379284,0,0,1.2797295032114,0.928946687441754,1.67527699718721,1.21010114774006,1.11189021922435,0.760902504450237,0,0.329397909448022,0,0.198956472041151,0,0,0,0,0.758671603812327,1.25673363870702,0,0.407302655690628,0.969762435838129,0.140271639780637,0.69560190836683,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0,1.32643988239339,1.79261474086228,2.20668611507745,1.17345124144251,1.67506257441816,1.42826184531608,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0,0,0,0,0,0.160550589987792,0.234423373184406,1.47541450839008,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,0.651547837414304,0.659880491890142,0,0.242780636154981,0.302323556964751,0.565815239267694,0.885905678642318,1.22974059177571,0,0,0.712994756769443,0.316036757935816,0,0,0,0.18006109403131,0,0,0.354680467284547,0,0.329098041204242,0.304464949114599,0.469343416127421,0.63549621259146,0,0.65954501176592,0.484393280087717,0.361877549568935,0.358117032009409,0.328281799490123,0,0,0,2.06386867963222,0.925972636848558,0,0.136694227721025,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,2.03319467126849,0.972048067396211,0.209088296014469,1.52853794622324,0.539457385539283,0.41326727862668,0,0,0,0,0.299033092087958,0.827292452285488,0.972255941720238,0.774958940866387,1.85851738039856,0.58678619322877,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0.167884616364078,0,3.37828455812128,0.549454872801795,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,1.19513524027894,1.21553358534147,0.209613162627982,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0.749132059759059,0.768301828858431,0.746661096422973,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,1.17759136107518,1.02860775715625,0,0.715308569841963,0.436039249896986,0.941093804153306,0.507687647350059,0.548783918618318,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,1.35034627686799,0.499621155875892,2.33931608445408,0.644613162144895,1.3390183244819,0.220591419119515,0.231867835620421|short_description=p6@Tmem45a}} | ||
|EntrezGene=56277 | |||
|HGNC= | |||
|UniProt=Q8BFU6 | |||
|association_with_transcript=194bp_to_NM_019631,uc007zmx.1_5end | |||
|description=CAGE_peak_6_at_Tmem45a_5end | |||
|id=chr16:56886068..56886081,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.30e-13,6;CL:0000187,2.30e-13,6;CL:0000056,2.30e-13,6;CL:0000222,2.44e-11,7;CL:0000355,1.23e-08,9;CL:0002494,6.49e-08,3;CL:0000737,6.49e-08,3;CL:0000746,6.49e-08,3;CL:0000513,6.49e-08,3;CL:0000192,4.56e-07,3;CL:0000359,4.56e-07,3;CL:0002539,4.56e-07,3;CL:0000514,4.56e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.62e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,5.98e-09,6;UBERON:0001443,5.98e-09,6;UBERON:0001134,1.23e-08,9;UBERON:0002036,1.23e-08,9;UBERON:0002385,1.23e-08,9;UBERON:0000486,1.23e-08,9;UBERON:0007503,1.23e-08,9;UBERON:0001015,1.23e-08,9;UBERON:0002329,1.23e-08,9;UBERON:0003082,1.23e-08,9;UBERON:0003059,1.23e-08,9;UBERON:0007282,1.23e-08,9;UBERON:0004290,1.23e-08,9;UBERON:0009618,1.23e-08,9;UBERON:0000383,1.08e-07,10;UBERON:0002102,2.35e-07,7;UBERON:0004710,2.35e-07,7;UBERON:0005419,2.35e-07,7;UBERON:0005417,2.35e-07,7;UBERON:0005729,2.35e-07,7;UBERON:0001135,4.56e-07,3;UBERON:0004237,4.56e-07,3;UBERON:0004695,4.56e-07,3;UBERON:0002111,4.56e-07,3;UBERON:0004178,4.56e-07,3;UBERON:0007524,6.41e-07,11;UBERON:0003077,6.41e-07,11;UBERON:0007285,6.41e-07,11 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.4192770370732,2.75320128242522,0,0,0,0.194429899074283,0,0,0,0,0,7.71778308107841,2.57880095944881,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0.153606533256243,0.263772575460388,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,4.94247935476367,5.19572009205738,2.47337702157238,0,0,0,0,0,0,0,0,0,0,0.693941307064543,0,0,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0,1.61766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12023300235348,0.248813941220186,0,0,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0.189106080167819,1.23165786914764,1.09597866213787,1.11218899690239,2.78601733217733,2.46938563689532,1.19420560091096,0,0,0,0.414251545071004,0,0.720248245844059,0.23674473558521,0.393528463494808,0.308534225774757,0.697601834251224,0.268273401399619,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.438599962275997,0.219550115291051,0.268412837520744,0,0.102904612379284,0,0,1.2797295032114,0.928946687441754,1.67527699718721,1.21010114774006,1.11189021922435,0.760902504450237,0,0.329397909448022,0,0.198956472041151,0,0,0,0,0.758671603812327,1.25673363870702,0,0.407302655690628,0.969762435838129,0.140271639780637,0.69560190836683,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0,1.32643988239339,1.79261474086228,2.20668611507745,1.17345124144251,1.67506257441816,1.42826184531608,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0,0,0,0,0,0.160550589987792,0.234423373184406,1.47541450839008,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,0.651547837414304,0.659880491890142,0,0.242780636154981,0.302323556964751,0.565815239267694,0.885905678642318,1.22974059177571,0,0,0.712994756769443,0.316036757935816,0,0,0,0.18006109403131,0,0,0.354680467284547,0,0.329098041204242,0.304464949114599,0.469343416127421,0.63549621259146,0,0.65954501176592,0.484393280087717,0.361877549568935,0.358117032009409,0.328281799490123,0,0,0,2.06386867963222,0.925972636848558,0,0.136694227721025,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,2.03319467126849,0.972048067396211,0.209088296014469,1.52853794622324,0.539457385539283,0.41326727862668,0,0,0,0,0.299033092087958,0.827292452285488,0.972255941720238,0.774958940866387,1.85851738039856,0.58678619322877,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0.167884616364078,0,3.37828455812128,0.549454872801795,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,1.19513524027894,1.21553358534147,0.209613162627982,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0.749132059759059,0.768301828858431,0.746661096422973,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,1.17759136107518,1.02860775715625,0,0.715308569841963,0.436039249896986,0.941093804153306,0.507687647350059,0.548783918618318,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,1.35034627686799,0.499621155875892,2.33931608445408,0.644613162144895,1.3390183244819,0.220591419119515,0.231867835620421 | |||
|short_description=p6@Tmem45a | |||
}} |
Revision as of 12:56, 13 September 2013
Short description: | p6@Tmem45a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tmem45a_5end |
Coexpression cluster: | NA |
Association with transcript: | 194bp_to_NM_019631, uc007zmx.1_5end |
EntrezGene: | Tmem45a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.30e-13 | 6 |
muscle cell | 2.30e-13 | 6 |
myoblast | 2.30e-13 | 6 |
mesodermal cell | 2.44e-11 | 7 |
multi-potent skeletal muscle stem cell | 1.23e-08 | 9 |
cardiocyte | 6.49e-08 | 3 |
striated muscle cell | 6.49e-08 | 3 |
cardiac muscle cell | 6.49e-08 | 3 |
cardiac muscle myoblast | 6.49e-08 | 3 |
smooth muscle cell | 4.56e-07 | 3 |
vascular associated smooth muscle cell | 4.56e-07 | 3 |
aortic smooth muscle cell | 4.56e-07 | 3 |
smooth muscle myoblast | 4.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 5.98e-09 | 6 |
chest | 5.98e-09 | 6 |
skeletal muscle tissue | 1.23e-08 | 9 |
striated muscle tissue | 1.23e-08 | 9 |
muscle tissue | 1.23e-08 | 9 |
multilaminar epithelium | 1.23e-08 | 9 |
epithelial vesicle | 1.23e-08 | 9 |
musculature | 1.23e-08 | 9 |
somite | 1.23e-08 | 9 |
myotome | 1.23e-08 | 9 |
presomitic mesoderm | 1.23e-08 | 9 |
presumptive segmental plate | 1.23e-08 | 9 |
dermomyotome | 1.23e-08 | 9 |
trunk paraxial mesoderm | 1.23e-08 | 9 |
musculature of body | 1.08e-07 | 10 |
forelimb | 2.35e-07 | 7 |
pectoral appendage | 2.35e-07 | 7 |
pectoral appendage bud | 2.35e-07 | 7 |
forelimb bud | 2.35e-07 | 7 |
forelimb/pectoral fin field | 2.35e-07 | 7 |
smooth muscle tissue | 4.56e-07 | 3 |
blood vessel smooth muscle | 4.56e-07 | 3 |
arterial system smooth muscle | 4.56e-07 | 3 |
artery smooth muscle tissue | 4.56e-07 | 3 |
aorta smooth muscle tissue | 4.56e-07 | 3 |
dense mesenchyme tissue | 6.41e-07 | 11 |
paraxial mesoderm | 6.41e-07 | 11 |
presumptive paraxial mesoderm | 6.41e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.