FFCP PHASE1:Mm9::chr15:99468218..99468227,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=26934|HGNC=|MCL_coexpression_id=84|UniProt=|association_with_transcript=471bp_to_ENSMUST00000171017_5end|description=CAGE_peak_4_at_Racgap1_5end|id=chr15:99468218..99468227,-|ontology_enrichment_celltype=CL:0000117!1.58e-12!23;CL:0000337!1.58e-12!23;CL:0000540!4.40e-11!33;CL:0000047!4.40e-11!33;CL:0000031!4.40e-11!33;CL:0000404!4.40e-11!33;CL:0000393!7.11e-09!39;CL:0000211!7.11e-09!39;CL:0000120!4.55e-08!3;CL:0002608!4.55e-08!3;CL:0002612!9.04e-08!3;CL:0002319!9.42e-08!43;CL:0000221!1.67e-07!44;CL:0000133!1.67e-07!44;CL:0002613!2.17e-07!3|ontology_enrichment_celltype_v019_2=CL:0000120,1.54e-29,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.49e-10!73;UBERON:0005743!1.49e-10!73;UBERON:0000073!3.95e-10!75;UBERON:0001016!3.95e-10!75;UBERON:0001049!3.72e-09!52;UBERON:0005068!3.72e-09!52;UBERON:0006241!3.72e-09!52;UBERON:0007135!3.72e-09!52;UBERON:0003080!2.05e-08!40;UBERON:0000007!8.83e-08!8;UBERON:0003296!8.83e-08!8;UBERON:0010133!8.83e-08!8;UBERON:0002257!9.04e-08!3;UBERON:0002346!1.60e-07!71;UBERON:0003075!1.60e-07!71;UBERON:0007284!1.60e-07!71;UBERON:0002780!1.83e-07!39;UBERON:0001890!1.83e-07!39;UBERON:0006240!1.83e-07!39;UBERON:0000369!3.30e-07!5;UBERON:0002435!3.30e-07!5;UBERON:0000204!3.30e-07!5;UBERON:0010082!3.30e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.89e-12,8;UBERON:0003296,4.89e-12,8;UBERON:0010133,4.89e-12,8;UBERON:0001894,7.63e-10,10;UBERON:0006222,7.63e-10,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0,0.367472397644862,0.383381884072945,0.919218786610021,0,0,0,0.131886287730194,0.274462930807229,0.52091337055676,0,0,0,0.589257170947335,0.142371680799103,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,10.5536277783674,0,0,0,0.354680467284547,0.535106452806212,0.493647061806363,2.13125464380219,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0,0.419226325255965,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p4@Racgap1}} | ||
|EntrezGene=26934 | |||
|HGNC= | |||
|MCL_coexpression_id=84 | |||
|UniProt= | |||
|association_with_transcript=471bp_to_ENSMUST00000171017_5end | |||
|description=CAGE_peak_4_at_Racgap1_5end | |||
|id=chr15:99468218..99468227,- | |||
|ontology_enrichment_celltype=CL:0000117!1.58e-12!23;CL:0000337!1.58e-12!23;CL:0000540!4.40e-11!33;CL:0000047!4.40e-11!33;CL:0000031!4.40e-11!33;CL:0000404!4.40e-11!33;CL:0000393!7.11e-09!39;CL:0000211!7.11e-09!39;CL:0000120!4.55e-08!3;CL:0002608!4.55e-08!3;CL:0002612!9.04e-08!3;CL:0002319!9.42e-08!43;CL:0000221!1.67e-07!44;CL:0000133!1.67e-07!44;CL:0002613!2.17e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,1.54e-29,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.49e-10!73;UBERON:0005743!1.49e-10!73;UBERON:0000073!3.95e-10!75;UBERON:0001016!3.95e-10!75;UBERON:0001049!3.72e-09!52;UBERON:0005068!3.72e-09!52;UBERON:0006241!3.72e-09!52;UBERON:0007135!3.72e-09!52;UBERON:0003080!2.05e-08!40;UBERON:0000007!8.83e-08!8;UBERON:0003296!8.83e-08!8;UBERON:0010133!8.83e-08!8;UBERON:0002257!9.04e-08!3;UBERON:0002346!1.60e-07!71;UBERON:0003075!1.60e-07!71;UBERON:0007284!1.60e-07!71;UBERON:0002780!1.83e-07!39;UBERON:0001890!1.83e-07!39;UBERON:0006240!1.83e-07!39;UBERON:0000369!3.30e-07!5;UBERON:0002435!3.30e-07!5;UBERON:0000204!3.30e-07!5;UBERON:0010082!3.30e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.89e-12,8;UBERON:0003296,4.89e-12,8;UBERON:0010133,4.89e-12,8;UBERON:0001894,7.63e-10,10;UBERON:0006222,7.63e-10,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0,0.367472397644862,0.383381884072945,0.919218786610021,0,0,0,0.131886287730194,0.274462930807229,0.52091337055676,0,0,0,0.589257170947335,0.142371680799103,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,10.5536277783674,0,0,0,0.354680467284547,0.535106452806212,0.493647061806363,2.13125464380219,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0,0.419226325255965,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Racgap1 | |||
}} |
Revision as of 11:53, 13 September 2013
Short description: | p4@Racgap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Racgap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:84 |
Association with transcript: | 471bp_to_ENSMUST00000171017_5end |
EntrezGene: | Racgap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 1.54e-29 | 3 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.89e-12 | 8 |
gland of diencephalon | 4.89e-12 | 8 |
neuroendocrine gland | 4.89e-12 | 8 |
diencephalon | 7.63e-10 | 10 |
future diencephalon | 7.63e-10 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.