FFCP PHASE1:Mm9::chr11:48715653..48715703,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=432555|HGNC=|MCL_coexpression_id=67|UniProt=A6PWD6,Q5NCB3,Q3TMS7,Q3ULY1|association_with_transcript=0bp_to_ENSMUST00000109210,ENSMUST00000109212,NM_001024230,uc007ipi.2_5end|description=CAGE_peak_1_at_Gm5431_5end|id=chr11:48715653..48715703,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002092,1.77e-14,3;CL:0002540,1.77e-14,3;CL:0000839,1.96e-12,13;CL:0000553,2.62e-12,6;CL:0000556,2.62e-12,6;CL:0002476,9.58e-11,2;CL:0000763,5.22e-10,16;CL:0002320,1.50e-08,46;CL:0000134,1.50e-08,46;CL:0000049,2.40e-08,19;CL:0000050,2.98e-08,9;CL:0000219,4.73e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!7.36e-07!193;UBERON:0004120!7.36e-07!193;UBERON:0006603!7.36e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.26e-22,16;UBERON:0001474,8.23e-16,22;UBERON:0004765,8.23e-16,22;UBERON:0001434,8.23e-16,22;UBERON:0002193,8.26e-12,48;UBERON:0002405,8.26e-12,48;UBERON:0002390,1.58e-10,45;UBERON:0003061,1.58e-10,45;UBERON:0002204,1.83e-10,32;UBERON:0002384,1.50e-08,46|phase1_expression=0.160148847104794,0,0,0.90739263392049,1.00179145989269,0.16787927191189,0.233612640595526,0.258246646883153,0,0,0,0,0,0.262261207256992,1.66554880907831,0.202475267389826,0.699561878128147,1.89277299214943,1.7824876368746,1.27316895539409,0.340173160604279,0,0,0.47997726838022,0,0,0,0.215471232685889,0,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0.633831403506179,0,0,2.6996991518442,3.9554654502679,1.4209602298922,0,0.384218305321555,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,1.73918693221007,0.860423876981386,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0.22836775943812,4.91981978929626,0.29688427812965,0,0,0,0.150722640552623,0.470354828542819,0.251333182659351,0.247194967734374,0.578397427679647,0,0,0.662524555381181,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.305518091550949,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0.268273401399619,0,0,0.32833492815819,0.162137619091711,0.292399974850665,0.658650345873152,0.536825675041487,0,0.102904612379284,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0.58489226135736,0,0,0,0.189667900953082,0,0,0,0,0.210407459670956,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0,0.763877555344259,0.287696137450811,0.486405680325106,0,1.43768206527355,0.372140947668503,0.624075346229121,0,0.538192240565737,0.482443521363367,1.10851914099963,0,0,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0,0.318909537314974,0.983179888294428,1.38147985492716,0.867894351489069,27.142431109069,26.6513785071168,0.983528546038072,1.10374698521893,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.325773918707152,0.989820737835213,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.32977250588296,0.484393280087717,0.361877549568935,0,0,0.291480836629851,0,1.36696704638282,0.619160603889667,0.740778109478847,0.188368457004691,1.0935538217682,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0.165458490457098,0,0,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.480781798079875,0.147689527174577,0,0.0762068066549998,0,0.487289403698762,0,0.233753804363138,0.453460767230423,0,0,0,0.965947970160952,1.50145980360946,1.46521299413812,0,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.628839487883947,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0.760437899670719,0,0.187283014939765,0.128050304809739,0.229741875822453,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p1@Gm5431}} | ||
|EntrezGene=432555 | |||
|HGNC= | |||
|MCL_coexpression_id=67 | |||
|UniProt=A6PWD6,Q5NCB3,Q3TMS7,Q3ULY1 | |||
|association_with_transcript=0bp_to_ENSMUST00000109210,ENSMUST00000109212,NM_001024230,uc007ipi.2_5end | |||
|description=CAGE_peak_1_at_Gm5431_5end | |||
|id=chr11:48715653..48715703,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,1.77e-14,3;CL:0002540,1.77e-14,3;CL:0000839,1.96e-12,13;CL:0000553,2.62e-12,6;CL:0000556,2.62e-12,6;CL:0002476,9.58e-11,2;CL:0000763,5.22e-10,16;CL:0002320,1.50e-08,46;CL:0000134,1.50e-08,46;CL:0000049,2.40e-08,19;CL:0000050,2.98e-08,9;CL:0000219,4.73e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!7.36e-07!193;UBERON:0004120!7.36e-07!193;UBERON:0006603!7.36e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.26e-22,16;UBERON:0001474,8.23e-16,22;UBERON:0004765,8.23e-16,22;UBERON:0001434,8.23e-16,22;UBERON:0002193,8.26e-12,48;UBERON:0002405,8.26e-12,48;UBERON:0002390,1.58e-10,45;UBERON:0003061,1.58e-10,45;UBERON:0002204,1.83e-10,32;UBERON:0002384,1.50e-08,46 | |||
|phase1_expression=0.160148847104794,0,0,0.90739263392049,1.00179145989269,0.16787927191189,0.233612640595526,0.258246646883153,0,0,0,0,0,0.262261207256992,1.66554880907831,0.202475267389826,0.699561878128147,1.89277299214943,1.7824876368746,1.27316895539409,0.340173160604279,0,0,0.47997726838022,0,0,0,0.215471232685889,0,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0.633831403506179,0,0,2.6996991518442,3.9554654502679,1.4209602298922,0,0.384218305321555,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,1.73918693221007,0.860423876981386,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0.22836775943812,4.91981978929626,0.29688427812965,0,0,0,0.150722640552623,0.470354828542819,0.251333182659351,0.247194967734374,0.578397427679647,0,0,0.662524555381181,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.305518091550949,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0.268273401399619,0,0,0.32833492815819,0.162137619091711,0.292399974850665,0.658650345873152,0.536825675041487,0,0.102904612379284,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0.58489226135736,0,0,0,0.189667900953082,0,0,0,0,0.210407459670956,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0,0.763877555344259,0.287696137450811,0.486405680325106,0,1.43768206527355,0.372140947668503,0.624075346229121,0,0.538192240565737,0.482443521363367,1.10851914099963,0,0,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0,0.318909537314974,0.983179888294428,1.38147985492716,0.867894351489069,27.142431109069,26.6513785071168,0.983528546038072,1.10374698521893,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.325773918707152,0.989820737835213,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.32977250588296,0.484393280087717,0.361877549568935,0,0,0.291480836629851,0,1.36696704638282,0.619160603889667,0.740778109478847,0.188368457004691,1.0935538217682,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0.165458490457098,0,0,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.480781798079875,0.147689527174577,0,0.0762068066549998,0,0.487289403698762,0,0.233753804363138,0.453460767230423,0,0,0,0.965947970160952,1.50145980360946,1.46521299413812,0,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.628839487883947,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0.760437899670719,0,0.187283014939765,0.128050304809739,0.229741875822453,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p1@Gm5431 | |||
}} |
Revision as of 19:47, 12 September 2013
Short description: | p1@Gm5431 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm5431_5end |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | 0bp_to_ENSMUST00000109210, ENSMUST00000109212, NM_001024230, uc007ipi.2_5end |
EntrezGene: | Gm5431 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 1.77e-14 | 3 |
mesenchymal stem cell of the bone marrow | 1.77e-14 | 3 |
myeloid lineage restricted progenitor cell | 1.96e-12 | 13 |
megakaryocyte progenitor cell | 2.62e-12 | 6 |
megakaryocyte | 2.62e-12 | 6 |
bone marrow macrophage | 9.58e-11 | 2 |
myeloid cell | 5.22e-10 | 16 |
connective tissue cell | 1.50e-08 | 46 |
mesenchymal cell | 1.50e-08 | 46 |
common myeloid progenitor | 2.40e-08 | 19 |
megakaryocyte-erythroid progenitor cell | 2.98e-08 | 9 |
motile cell | 4.73e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.26e-22 | 16 |
bone element | 8.23e-16 | 22 |
skeletal element | 8.23e-16 | 22 |
skeletal system | 8.23e-16 | 22 |
hemolymphoid system | 8.26e-12 | 48 |
immune system | 8.26e-12 | 48 |
hematopoietic system | 1.58e-10 | 45 |
blood island | 1.58e-10 | 45 |
musculoskeletal system | 1.83e-10 | 32 |
connective tissue | 1.50e-08 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.