FFCP PHASE1:Mm9::chr5:31248044..31248049,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68567|HGNC=|MCL_coexpression_id=92|UniProt=E9QPK1,Q8R1U2|association_with_transcript=-191bp_to_ENSMUST00000031051,NM_026770,uc008wwo.1_5end|description=CAGE_peak_5_at_Cgref1_5end|id=chr5:31248044..31248049,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000217,1.66e-44,2;CL:0000328,1.66e-44,2;CL:0002573,1.66e-44,2;CL:0002376,1.66e-44,2;CL:0000218,1.66e-44,2;CL:0000692,1.66e-44,2;CL:0002377,1.66e-44,2;CL:0002375,1.66e-44,2;CL:0000215,4.03e-30,3;CL:0000333,7.63e-10,10;CL:0000095,7.63e-10,10;CL:0000243,7.63e-10,10;CL:0000123,7.63e-10,10;CL:0000125,7.63e-10,10;CL:0000030,7.63e-10,10;CL:0000339,7.63e-10,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!5.64e-18!34;UBERON:0002791!1.82e-17!29;UBERON:0003528!1.82e-17!29;UBERON:0001893!1.82e-17!29;UBERON:0002780!8.15e-15!39;UBERON:0001890!8.15e-15!39;UBERON:0006240!8.15e-15!39;UBERON:0003080!2.60e-14!40;UBERON:0001049!1.03e-13!52;UBERON:0005068!1.03e-13!52;UBERON:0006241!1.03e-13!52;UBERON:0007135!1.03e-13!52;UBERON:0003056!4.25e-13!49;UBERON:0000956!4.47e-13!21;UBERON:0001869!4.47e-13!21;UBERON:0000203!4.47e-13!21;UBERON:0002619!4.67e-12!17;UBERON:0002616!6.57e-12!49;UBERON:0000955!1.46e-11!50;UBERON:0006238!1.46e-11!50;UBERON:0002346!2.38e-11!71;UBERON:0003075!2.38e-11!71;UBERON:0007284!2.38e-11!71;UBERON:0000073!8.28e-11!75;UBERON:0001016!8.28e-11!75;UBERON:0000033!6.58e-10!63;UBERON:0002021!1.33e-09!10;UBERON:0000411!1.33e-09!10;UBERON:0001950!1.33e-09!10;UBERON:0004121!3.48e-09!102;UBERON:0000924!3.48e-09!102;UBERON:0006601!3.48e-09!102;UBERON:0001017!6.18e-09!73;UBERON:0005743!6.18e-09!73;UBERON:0007811!2.73e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.82e-09,11|phase1_expression=0,1.04692622291808,0,0,0,0,0,0,0,0,0.171217968225505,0.239316476986009,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0,0,3.86203585999239,1.5870027622425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.502617408451458,0.521472960576829,0.255715457330331,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.720332286654991,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p5@Cgref1}} | ||
|EntrezGene=68567 | |||
|HGNC= | |||
|MCL_coexpression_id=92 | |||
|UniProt=E9QPK1,Q8R1U2 | |||
|association_with_transcript=-191bp_to_ENSMUST00000031051,NM_026770,uc008wwo.1_5end | |||
|description=CAGE_peak_5_at_Cgref1_5end | |||
|id=chr5:31248044..31248049,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,1.66e-44,2;CL:0000328,1.66e-44,2;CL:0002573,1.66e-44,2;CL:0002376,1.66e-44,2;CL:0000218,1.66e-44,2;CL:0000692,1.66e-44,2;CL:0002377,1.66e-44,2;CL:0002375,1.66e-44,2;CL:0000215,4.03e-30,3;CL:0000333,7.63e-10,10;CL:0000095,7.63e-10,10;CL:0000243,7.63e-10,10;CL:0000123,7.63e-10,10;CL:0000125,7.63e-10,10;CL:0000030,7.63e-10,10;CL:0000339,7.63e-10,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.64e-18!34;UBERON:0002791!1.82e-17!29;UBERON:0003528!1.82e-17!29;UBERON:0001893!1.82e-17!29;UBERON:0002780!8.15e-15!39;UBERON:0001890!8.15e-15!39;UBERON:0006240!8.15e-15!39;UBERON:0003080!2.60e-14!40;UBERON:0001049!1.03e-13!52;UBERON:0005068!1.03e-13!52;UBERON:0006241!1.03e-13!52;UBERON:0007135!1.03e-13!52;UBERON:0003056!4.25e-13!49;UBERON:0000956!4.47e-13!21;UBERON:0001869!4.47e-13!21;UBERON:0000203!4.47e-13!21;UBERON:0002619!4.67e-12!17;UBERON:0002616!6.57e-12!49;UBERON:0000955!1.46e-11!50;UBERON:0006238!1.46e-11!50;UBERON:0002346!2.38e-11!71;UBERON:0003075!2.38e-11!71;UBERON:0007284!2.38e-11!71;UBERON:0000073!8.28e-11!75;UBERON:0001016!8.28e-11!75;UBERON:0000033!6.58e-10!63;UBERON:0002021!1.33e-09!10;UBERON:0000411!1.33e-09!10;UBERON:0001950!1.33e-09!10;UBERON:0004121!3.48e-09!102;UBERON:0000924!3.48e-09!102;UBERON:0006601!3.48e-09!102;UBERON:0001017!6.18e-09!73;UBERON:0005743!6.18e-09!73;UBERON:0007811!2.73e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.82e-09,11 | |||
|phase1_expression=0,1.04692622291808,0,0,0,0,0,0,0,0,0.171217968225505,0.239316476986009,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0,0,3.86203585999239,1.5870027622425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.502617408451458,0.521472960576829,0.255715457330331,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.720332286654991,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p5@Cgref1 | |||
}} |
Revision as of 07:24, 14 September 2013
Short description: | p5@Cgref1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cgref1_5end |
Coexpression cluster: | MCL_coexpression_mm9:92 |
Association with transcript: | -191bp_to_ENSMUST00000031051, NM_026770, uc008wwo.1_5end |
EntrezGene: | Cgref1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 1.66e-44 | 2 |
myelin accumulating cell | 1.66e-44 | 2 |
Schwann cell | 1.66e-44 | 2 |
non-myelinating Schwann cell | 1.66e-44 | 2 |
myelinating Schwann cell;;Schwann cell | 1.66e-44 | 2 |
terminal Schwann cell | 1.66e-44 | 2 |
immature Schwann cell | 1.66e-44 | 2 |
Schwann cell precursor | 1.66e-44 | 2 |
barrier cell | 4.03e-30 | 3 |
migratory neural crest cell | 7.63e-10 | 10 |
neuron associated cell | 7.63e-10 | 10 |
glial cell (sensu Vertebrata) | 7.63e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 7.63e-10 | 10 |
glial cell | 7.63e-10 | 10 |
glioblast | 7.63e-10 | 10 |
glioblast (sensu Vertebrata) | 7.63e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 4.82e-09 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.