Personal tools

FFCP PHASE1:Mm9::chr14:62218387..62218406,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=66597|HGNC=|UniProt=Q9CYB0,A6H6L2|association_with_transcript=38bp_to_ENSMUST00000039562,NM_023233,uc007ufz.2_5end|description=CAGE_peak_2_at_Trim13_5end|id=chr14:62218387..62218406,+|ontology_enrichment_celltype=CL:0000540!1.44e-08!33;CL:0000047!1.44e-08!33;CL:0000031!1.44e-08!33;CL:0000404!1.44e-08!33;CL:0000393!2.29e-08!39;CL:0000211!2.29e-08!39|ontology_enrichment_celltype_v019_2=CL:0000540,2.28e-11,33;CL:0000047,2.28e-11,33;CL:0000031,2.28e-11,33;CL:0000404,2.28e-11,33;CL:0000221,1.44e-10,44;CL:0000133,1.44e-10,44;CL:0002319,1.16e-09,43;CL:0000393,1.38e-09,39;CL:0000211,1.38e-09,39;CL:0000034,1.77e-09,97;CL:0002321,9.70e-09,70;CL:0000107,1.44e-08,9;CL:0000723,2.71e-08,91;CL:0000048,2.71e-08,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.85e-09!102;UBERON:0000924!4.85e-09!102;UBERON:0006601!4.85e-09!102;UBERON:0000073!3.02e-07!75;UBERON:0001016!3.02e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.37e-11,11;UBERON:0001016,1.29e-08,75;UBERON:0002410,1.44e-08,9;UBERON:0004121,5.95e-08,95;UBERON:0000924,5.95e-08,95;UBERON:0006601,5.95e-08,95;UBERON:0001017,2.76e-07,73|phase1_expression=0.640595388419176,0,0.909998478779072,0.30246421130683,1.00179145989269,0,0.233612640595526,0.774739940649458,0.703943610758334,2.57470978954193,0.34243593645101,0.239316476986009,1.71200729931206,1.92324885321794,0,0,0.699561878128147,0,0,0,0.595303031057488,0.595745707205312,0.783599367416806,0.319984845586813,0.22940928106717,0,0,0,0.950117097281869,0,0.221730510655305,1.27006134691926,1.23012957516914,0,0.288851619751275,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0.377690453926732,0.811015449756117,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.335565212115473,2.17608642603403,3.02484419228218,0.771778308107841,0.573066879877513,1.03134418455488,0.809265843438391,0,1.90149421051854,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,1.14058573539325,1.08004750665353,0.420649922702764,0.571301968807607,0.662605622854841,1.71487118900936,2.39613677545591,1.83843757322004,0,0.766124028511126,1.22885226604995,1.45074916503213,2.01272815925301,1.04182674111352,1.67509799400829,1.12552522006336,0.61119299110724,1.47314292736834,0.996601765593721,0.745597783301202,2.19605960666234,5.89458168832927,1.15945795480671,0,1.3599426674155,0,0,0,0.421333260395256,0.170430322578058,0.519572009205738,0,3.52108549441701,0,0,0,1.73192832808971,1.52015919285059,1.51657333504435,0.34255163915718,0,0.593768556259299,0.520455980298408,0.304465478312141,0.691846491768175,0.753613202763113,0.705532242814229,0.628332956648377,0.247194967734374,0.144599356919912,0,0,0,0,0,0.878342391034642,1.46612694769419,0,0.958520996047362,2.39961092397363,1.39777249780371,0.748953197024114,1.37250180845588,1.88481528169297,0.347648640384553,1.27857728665165,0.62336413367868,0.973447578406546,0.407357455401265,0.124406970610093,0,0.420883711772948,0.780722657776222,1.14951052216736,0.540186389416048,1.05493372485001,1.02054748726992,0.768682321709099,0.655912071918102,0.776110112217047,0.215567992932842,0.567318240503458,0.351902248327898,0.876782929710299,1.11218899690239,0.696504333044333,0.411564272815887,0.59710280045548,2.1066395619397,0.772043721344145,1.70498099637356,0,0,0.720248245844059,0.23674473558521,0,0.617068451549513,0.465067889500816,0.268273401399619,0.467061369468678,0.987359099480883,0.32833492815819,0.405344047729279,0.584799949701329,0.219550115291051,0.402619256281115,0.210289948564127,1.64647379806855,0.991256348951394,0.264450566663544,0.426576501070468,0,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0.474529061544512,0.494096864172033,0,0.198956472041151,0.58489226135736,0.898819408654221,0.216138049874694,0,0.189667900953082,0.114248512609729,1.1270773567308,0.814605311381257,0.387904974335251,1.05203729835478,1.20149420536089,0.295220295959204,0.470996183524124,0.493588655687202,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.369506380333209,0.37898282354097,0.651859905768103,0.169745085775188,0,0.335012514883631,1.6663054862021,0.195133647857799,0.788175720530955,0.44292937929755,0.478364305972461,0.327726629431476,0.518054945597687,0.867894351489069,1.50791283939272,0.54390568381871,0.491764273019036,0.551873492609465,2.0871576698413,2.34423373184406,0.163934945376675,1.26235463602186,0,1.56175497718655,1.07711698866399,1.91175038362042,2.22798674082394,2.83076530788832,1.61924280669958,2.63030272120181,1.58115111178609,0.963963949265421,0.567760340833074,0.178065603667255,0.488660878060728,1.15479086080775,2.65490276679926,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,1.80899805217755,0.363533729477506,0.356497378384721,0.632073515871632,0,1.03135543248187,1.02131881726136,0.720244376125241,0.517434735131018,0,0.709360934569094,0.891844088010353,0.329098041204242,0,0.704015124191131,0.42366414172764,0,1.31909002353184,0.322928853391811,0.72375509913787,0.238744688006273,0.492422699235184,0.291480836629851,1.66882771809459,0.341741761595705,0.206386867963223,0.555583582109135,0.188368457004691,0,0,1.5298058699447,2.09927178485487,2.07299960706636,0.954670618015114,0.790839983952838,0.406638934253697,0.756037385752609,0.209088296014469,0.87345025498471,0.404593039154462,0.909188012978695,1.30877970992015,0.129614973291793,0,0,0.747582730219894,0.496375471371293,0.777804753376191,0.387479470433193,0.506868376472335,0.58678619322877,0.651021924219751,1.15345278868282,0.966336483304024,0.864090018773596,0.632022241256357,0,0.410843828659309,0.389762468933385,0.358053391334963,0.198681354781265,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0.292373642219257,0.192423683280659,0.233753804363138,0.906921534460845,0.221985953374065,0.538283139656854,0.167884616364078,1.35232715822533,0.93841237725591,0.183151624267265,2.35805216986972,0,0.564751842617067,0.920650473014354,1.14579102687879,0.515559547031063,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.31136204275253,0,1.02440163452481,0.972426868273176,0.209613162627982,0.367687016900028,0.666740183404846,0,0.64183841918363,0.758091635291392,1.01391719956096,0.188626341386076,0.37456602987953,0.320125762024346,0.574354689556133,0.476293691283074,0.695305955669133,0.38581844092741,0,0.441596760403192,0,1.4198064492747,0.238436189947321,0.145346416632329,0.846984423737976,0.507687647350059,0.914639864363863,0.263069711437843,0.271608227691724,1.12228454331548,0.237270036248348,0.492522411877817,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0,0.661774257358546,1.62307484934295|short_description=p2@Trim13}}
|EntrezGene=66597
|HGNC=
|UniProt=Q9CYB0,A6H6L2
|association_with_transcript=38bp_to_ENSMUST00000039562,NM_023233,uc007ufz.2_5end
|description=CAGE_peak_2_at_Trim13_5end
|id=chr14:62218387..62218406,+
|ontology_enrichment_celltype=CL:0000540!1.44e-08!33;CL:0000047!1.44e-08!33;CL:0000031!1.44e-08!33;CL:0000404!1.44e-08!33;CL:0000393!2.29e-08!39;CL:0000211!2.29e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000540,2.28e-11,33;CL:0000047,2.28e-11,33;CL:0000031,2.28e-11,33;CL:0000404,2.28e-11,33;CL:0000221,1.44e-10,44;CL:0000133,1.44e-10,44;CL:0002319,1.16e-09,43;CL:0000393,1.38e-09,39;CL:0000211,1.38e-09,39;CL:0000034,1.77e-09,97;CL:0002321,9.70e-09,70;CL:0000107,1.44e-08,9;CL:0000723,2.71e-08,91;CL:0000048,2.71e-08,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.85e-09!102;UBERON:0000924!4.85e-09!102;UBERON:0006601!4.85e-09!102;UBERON:0000073!3.02e-07!75;UBERON:0001016!3.02e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.37e-11,11;UBERON:0001016,1.29e-08,75;UBERON:0002410,1.44e-08,9;UBERON:0004121,5.95e-08,95;UBERON:0000924,5.95e-08,95;UBERON:0006601,5.95e-08,95;UBERON:0001017,2.76e-07,73
|phase1_expression=0.640595388419176,0,0.909998478779072,0.30246421130683,1.00179145989269,0,0.233612640595526,0.774739940649458,0.703943610758334,2.57470978954193,0.34243593645101,0.239316476986009,1.71200729931206,1.92324885321794,0,0,0.699561878128147,0,0,0,0.595303031057488,0.595745707205312,0.783599367416806,0.319984845586813,0.22940928106717,0,0,0,0.950117097281869,0,0.221730510655305,1.27006134691926,1.23012957516914,0,0.288851619751275,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0.377690453926732,0.811015449756117,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.335565212115473,2.17608642603403,3.02484419228218,0.771778308107841,0.573066879877513,1.03134418455488,0.809265843438391,0,1.90149421051854,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,1.14058573539325,1.08004750665353,0.420649922702764,0.571301968807607,0.662605622854841,1.71487118900936,2.39613677545591,1.83843757322004,0,0.766124028511126,1.22885226604995,1.45074916503213,2.01272815925301,1.04182674111352,1.67509799400829,1.12552522006336,0.61119299110724,1.47314292736834,0.996601765593721,0.745597783301202,2.19605960666234,5.89458168832927,1.15945795480671,0,1.3599426674155,0,0,0,0.421333260395256,0.170430322578058,0.519572009205738,0,3.52108549441701,0,0,0,1.73192832808971,1.52015919285059,1.51657333504435,0.34255163915718,0,0.593768556259299,0.520455980298408,0.304465478312141,0.691846491768175,0.753613202763113,0.705532242814229,0.628332956648377,0.247194967734374,0.144599356919912,0,0,0,0,0,0.878342391034642,1.46612694769419,0,0.958520996047362,2.39961092397363,1.39777249780371,0.748953197024114,1.37250180845588,1.88481528169297,0.347648640384553,1.27857728665165,0.62336413367868,0.973447578406546,0.407357455401265,0.124406970610093,0,0.420883711772948,0.780722657776222,1.14951052216736,0.540186389416048,1.05493372485001,1.02054748726992,0.768682321709099,0.655912071918102,0.776110112217047,0.215567992932842,0.567318240503458,0.351902248327898,0.876782929710299,1.11218899690239,0.696504333044333,0.411564272815887,0.59710280045548,2.1066395619397,0.772043721344145,1.70498099637356,0,0,0.720248245844059,0.23674473558521,0,0.617068451549513,0.465067889500816,0.268273401399619,0.467061369468678,0.987359099480883,0.32833492815819,0.405344047729279,0.584799949701329,0.219550115291051,0.402619256281115,0.210289948564127,1.64647379806855,0.991256348951394,0.264450566663544,0.426576501070468,0,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0.474529061544512,0.494096864172033,0,0.198956472041151,0.58489226135736,0.898819408654221,0.216138049874694,0,0.189667900953082,0.114248512609729,1.1270773567308,0.814605311381257,0.387904974335251,1.05203729835478,1.20149420536089,0.295220295959204,0.470996183524124,0.493588655687202,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.369506380333209,0.37898282354097,0.651859905768103,0.169745085775188,0,0.335012514883631,1.6663054862021,0.195133647857799,0.788175720530955,0.44292937929755,0.478364305972461,0.327726629431476,0.518054945597687,0.867894351489069,1.50791283939272,0.54390568381871,0.491764273019036,0.551873492609465,2.0871576698413,2.34423373184406,0.163934945376675,1.26235463602186,0,1.56175497718655,1.07711698866399,1.91175038362042,2.22798674082394,2.83076530788832,1.61924280669958,2.63030272120181,1.58115111178609,0.963963949265421,0.567760340833074,0.178065603667255,0.488660878060728,1.15479086080775,2.65490276679926,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,1.80899805217755,0.363533729477506,0.356497378384721,0.632073515871632,0,1.03135543248187,1.02131881726136,0.720244376125241,0.517434735131018,0,0.709360934569094,0.891844088010353,0.329098041204242,0,0.704015124191131,0.42366414172764,0,1.31909002353184,0.322928853391811,0.72375509913787,0.238744688006273,0.492422699235184,0.291480836629851,1.66882771809459,0.341741761595705,0.206386867963223,0.555583582109135,0.188368457004691,0,0,1.5298058699447,2.09927178485487,2.07299960706636,0.954670618015114,0.790839983952838,0.406638934253697,0.756037385752609,0.209088296014469,0.87345025498471,0.404593039154462,0.909188012978695,1.30877970992015,0.129614973291793,0,0,0.747582730219894,0.496375471371293,0.777804753376191,0.387479470433193,0.506868376472335,0.58678619322877,0.651021924219751,1.15345278868282,0.966336483304024,0.864090018773596,0.632022241256357,0,0.410843828659309,0.389762468933385,0.358053391334963,0.198681354781265,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0.292373642219257,0.192423683280659,0.233753804363138,0.906921534460845,0.221985953374065,0.538283139656854,0.167884616364078,1.35232715822533,0.93841237725591,0.183151624267265,2.35805216986972,0,0.564751842617067,0.920650473014354,1.14579102687879,0.515559547031063,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.31136204275253,0,1.02440163452481,0.972426868273176,0.209613162627982,0.367687016900028,0.666740183404846,0,0.64183841918363,0.758091635291392,1.01391719956096,0.188626341386076,0.37456602987953,0.320125762024346,0.574354689556133,0.476293691283074,0.695305955669133,0.38581844092741,0,0.441596760403192,0,1.4198064492747,0.238436189947321,0.145346416632329,0.846984423737976,0.507687647350059,0.914639864363863,0.263069711437843,0.271608227691724,1.12228454331548,0.237270036248348,0.492522411877817,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0,0.661774257358546,1.62307484934295
|short_description=p2@Trim13
}}

Revision as of 02:41, 13 September 2013

Short description:p2@Trim13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trim13_5end
Coexpression cluster:NA
Association with transcript: 38bp_to_ENSMUST00000039562, NM_023233, uc007ufz.2_5end
EntrezGene:Trim13
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Trim13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D92.20
Mouse Schwann, donor2.CNhs12573.11746-123F95.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.28e-1133
neuronal stem cell2.28e-1133
neuroblast2.28e-1133
electrically signaling cell2.28e-1133
ectodermal cell1.44e-1044
neurectodermal cell1.44e-1044
neural cell1.16e-0943
electrically responsive cell1.38e-0939
electrically active cell1.38e-0939
stem cell1.77e-0997
embryonic cell9.70e-0970
autonomic neuron1.44e-089
somatic stem cell2.71e-0891
multi fate stem cell2.71e-0891

Uber anatomy
Ontology termp-valuen
peripheral nervous system4.37e-1111
nervous system1.29e-0875
autonomic nervous system1.44e-089
ectoderm-derived structure5.95e-0895
ectoderm5.95e-0895
presumptive ectoderm5.95e-0895
central nervous system2.76e-0773







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr14:62218387..62218406,%2B&oldid=2921000"