FFCP PHASE1:Mm9::chr6:48720805..48720821,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=83408|HGNC=|MCL_coexpression_id=21|UniProt=Q99MI6|association_with_transcript=28bp_to_NM_031247,uc009bvt.1_5end|description=CAGE_peak_2_at_Gimap3_5end|id=chr6:48720805..48720821,-|ontology_enrichment_celltype=CL:0000838!8.32e-11!12;CL:0000084!5.86e-10!11;CL:0000827!5.86e-10!11;CL:0000791!8.44e-10!9;CL:0000789!8.44e-10!9;CL:0002420!8.44e-10!9;CL:0002419!8.44e-10!9;CL:0000790!8.44e-10!9;CL:0000542!1.35e-09!13;CL:0000051!1.35e-09!13;CL:0000624!6.98e-09!8;CL:0002031!7.99e-09!25;CL:0000893!5.52e-07!6;CL:0002489!5.52e-07!6;CL:0000898!5.52e-07!6;CL:0000809!5.52e-07!6;CL:0000810!5.52e-07!6;CL:0000895!5.52e-07!6;CL:0000808!5.52e-07!6;CL:0000894!5.52e-07!6;CL:0000806!5.52e-07!6;CL:0000807!5.52e-07!6;CL:0000805!5.52e-07!6;CL:0002425!5.52e-07!6;CL:0002436!5.52e-07!6;CL:0002427!5.52e-07!6;CL:0002428!5.52e-07!6;CL:0002429!5.52e-07!6;CL:0002433!5.52e-07!6;CL:0002431!5.52e-07!6;CL:0002432!5.52e-07!6|ontology_enrichment_celltype_v019_2=CL:0000791,1.22e-14,9;CL:0000789,1.22e-14,9;CL:0002420,1.22e-14,9;CL:0002419,1.22e-14,9;CL:0000790,1.22e-14,9;CL:0000624,3.48e-13,8;CL:0000838,8.21e-13,12;CL:0000542,1.34e-11,13;CL:0000051,1.34e-11,13;CL:0002031,1.62e-11,25;CL:0000084,1.67e-11,11;CL:0000827,1.67e-11,11;CL:0000893,3.51e-10,6;CL:0002489,3.51e-10,6;CL:0000898,3.51e-10,6;CL:0000809,3.51e-10,6;CL:0000810,3.51e-10,6;CL:0000895,3.51e-10,6;CL:0000808,3.51e-10,6;CL:0000894,3.51e-10,6;CL:0000806,3.51e-10,6;CL:0000807,3.51e-10,6;CL:0000805,3.51e-10,6;CL:0002425,3.51e-10,6;CL:0002436,3.51e-10,6;CL:0002427,3.51e-10,6;CL:0002428,3.51e-10,6;CL:0002429,3.51e-10,6;CL:0002433,3.51e-10,6;CL:0002431,3.51e-10,6;CL:0002432,3.51e-10,6;CL:0000738,3.40e-08,17;CL:0002087,3.40e-08,17;CL:0000988,5.15e-08,32;CL:0002032,5.15e-08,32;CL:0000037,5.15e-08,32;CL:0000837,5.15e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.17e-13!128;UBERON:0001555!1.17e-13!128;UBERON:0007026!1.17e-13!128;UBERON:0004119!1.25e-13!130;UBERON:0000925!1.25e-13!130;UBERON:0006595!1.25e-13!130;UBERON:0004177!1.98e-13!29;UBERON:0002193!4.06e-13!48;UBERON:0004921!1.44e-12!126;UBERON:0004185!1.44e-12!126;UBERON:0002405!4.12e-12!70;UBERON:0002390!3.93e-11!45;UBERON:0003061!3.93e-11!45;UBERON:0005057!5.60e-11!51;UBERON:0003408!3.31e-10!24;UBERON:0000077!5.17e-10!97;UBERON:0006562!8.02e-10!24;UBERON:0001557!8.02e-10!24;UBERON:0001042!8.02e-10!24;UBERON:0008814!8.02e-10!24;UBERON:0009145!8.02e-10!24;UBERON:0002370!1.19e-09!23;UBERON:0000974!1.19e-09!23;UBERON:0004807!1.19e-09!23;UBERON:0005058!1.19e-09!23;UBERON:0003351!1.19e-09!23;UBERON:0009113!1.19e-09!23;UBERON:0003295!1.19e-09!23;UBERON:0009722!1.19e-09!23;UBERON:0005562!1.19e-09!23;UBERON:0007690!1.19e-09!23;UBERON:0001041!3.46e-09!92;UBERON:0001004!7.64e-09!42;UBERON:0000065!2.30e-08!41;UBERON:0000072!6.07e-08!27;UBERON:0007023!7.28e-08!51;UBERON:0003104!1.74e-07!131;UBERON:0009142!1.74e-07!131;UBERON:0005911!3.04e-07!69;UBERON:0002530!5.63e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.96e-16,48;UBERON:0002405,1.96e-16,48;UBERON:0004177,1.55e-14,29;UBERON:0005057,1.55e-14,29;UBERON:0002390,1.61e-13,45;UBERON:0003061,1.61e-13,45;UBERON:0001007,2.04e-12,116;UBERON:0001555,2.04e-12,116;UBERON:0007026,2.04e-12,116;UBERON:0003408,2.06e-12,24;UBERON:0001004,2.30e-12,42;UBERON:0004119,5.30e-12,118;UBERON:0000925,5.30e-12,118;UBERON:0006595,5.30e-12,118;UBERON:0000065,1.27e-11,41;UBERON:0002370,1.41e-11,23;UBERON:0000974,1.41e-11,23;UBERON:0004807,1.41e-11,23;UBERON:0005058,1.41e-11,23;UBERON:0003351,1.41e-11,23;UBERON:0009113,1.41e-11,23;UBERON:0003295,1.41e-11,23;UBERON:0009722,1.41e-11,23;UBERON:0005562,1.41e-11,23;UBERON:0007690,1.41e-11,23;UBERON:0004921,4.50e-11,114;UBERON:0000077,4.69e-11,35;UBERON:0006562,6.53e-11,24;UBERON:0001557,6.53e-11,24;UBERON:0001042,6.53e-11,24;UBERON:0008814,6.53e-11,24;UBERON:0009145,6.53e-11,24;UBERON:0001041,2.10e-10,80;UBERON:0000072,3.20e-09,27;UBERON:0005911,5.21e-07,69;UBERON:0007811,8.75e-07,36;UBERON:0007023,9.36e-07,51|phase1_expression=0,0,0,0,0,0,0.233612640595526,305.505783262769,94.8915987302234,52.6645184224485,26.5387850749533,21.5384829287408,133.022967156547,191.188420090347,3.33109761815663,7.49158489342356,0.699561878128147,34.7008381894061,37.0208970735495,23.3414308488917,1.7008658030214,0.496454756004426,0.261199789138935,4.63978026100879,5.04700418347774,0,0,0.215471232685889,1.33016393619462,4.53654233567875,1.77384408524244,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.939347575485,114.607218437792,75.6211048070544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,1.13589289999776,0,0.289864488701678,2.58127163094416,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,3.4255163915718,38.8406825470758,2.82040064223167,0,0,0,0,0,0.376999773989026,0,1.15679485535929,0,0,1.54589062922275,0,0,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,1.61729061793121,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.486412857275134,0.438599962275997,0.439100230582101,0.805238512562231,0,0,6.93879444265976,1.05780226665418,0,0,0,0,0.22237804384487,0,0.949058123089023,0.164698954724011,1.50801125280162,0.795825888164603,2.53453313254856,0,0.648414149624083,1.99141273254367,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.295220295959204,0,0.863780147452604,0.889357881261447,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.549122826376163,0,1.48856379067401,2.49630138491648,1.26289438973556,0.358794827043824,0.482443521363367,10.9004382198297,0,0,0,0,0,0,0,1.7339865851681,1.7717175171902,1.2756381492599,6.71839590334526,5.52591941970866,4.05017364028232,0,0,1.47529281905711,3.86311444826625,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.64970122972535,3.98235415019888,0,0,0,0,0,0,0,0.712994756769443,2.84433082142234,0,0,0.680879211507576,0,0,0,0,0,0,0,0.23467170806371,0,0.661585194164886,0.16488625294148,0,0,0,0.164140899745061,1.1659233465194,0,10.0813819670733,0.82554747185289,0.740778109478847,5.65105371014073,7.51818252465638,12.3540213531522,0.679913719975421,0.559805809294632,0.138199973804424,1.90934123603023,0,0,0,0,0,0,0.41326727862668,0.26175594198403,1.03691978633434,1.86401793926078,0,0,0,0,0,0,0.117357238645754,0,0,0,0,8.21628913633263,0,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,5.04820887983869,3.39685912501528,4.34155734777035,1.752756553065,3.83139503519994,7.21188317474168,8.27421838106833,7.24636793525727,0.226730383615211,0,0,0,0.579568782096571,0.93841237725591,0.915758121336325,0.428736758158132,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0.441182838239031,0|short_description=p2@Gimap3}} | ||
|EntrezGene=83408 | |||
|HGNC= | |||
|MCL_coexpression_id=21 | |||
|UniProt=Q99MI6 | |||
|association_with_transcript=28bp_to_NM_031247,uc009bvt.1_5end | |||
|description=CAGE_peak_2_at_Gimap3_5end | |||
|id=chr6:48720805..48720821,- | |||
|ontology_enrichment_celltype=CL:0000838!8.32e-11!12;CL:0000084!5.86e-10!11;CL:0000827!5.86e-10!11;CL:0000791!8.44e-10!9;CL:0000789!8.44e-10!9;CL:0002420!8.44e-10!9;CL:0002419!8.44e-10!9;CL:0000790!8.44e-10!9;CL:0000542!1.35e-09!13;CL:0000051!1.35e-09!13;CL:0000624!6.98e-09!8;CL:0002031!7.99e-09!25;CL:0000893!5.52e-07!6;CL:0002489!5.52e-07!6;CL:0000898!5.52e-07!6;CL:0000809!5.52e-07!6;CL:0000810!5.52e-07!6;CL:0000895!5.52e-07!6;CL:0000808!5.52e-07!6;CL:0000894!5.52e-07!6;CL:0000806!5.52e-07!6;CL:0000807!5.52e-07!6;CL:0000805!5.52e-07!6;CL:0002425!5.52e-07!6;CL:0002436!5.52e-07!6;CL:0002427!5.52e-07!6;CL:0002428!5.52e-07!6;CL:0002429!5.52e-07!6;CL:0002433!5.52e-07!6;CL:0002431!5.52e-07!6;CL:0002432!5.52e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.22e-14,9;CL:0000789,1.22e-14,9;CL:0002420,1.22e-14,9;CL:0002419,1.22e-14,9;CL:0000790,1.22e-14,9;CL:0000624,3.48e-13,8;CL:0000838,8.21e-13,12;CL:0000542,1.34e-11,13;CL:0000051,1.34e-11,13;CL:0002031,1.62e-11,25;CL:0000084,1.67e-11,11;CL:0000827,1.67e-11,11;CL:0000893,3.51e-10,6;CL:0002489,3.51e-10,6;CL:0000898,3.51e-10,6;CL:0000809,3.51e-10,6;CL:0000810,3.51e-10,6;CL:0000895,3.51e-10,6;CL:0000808,3.51e-10,6;CL:0000894,3.51e-10,6;CL:0000806,3.51e-10,6;CL:0000807,3.51e-10,6;CL:0000805,3.51e-10,6;CL:0002425,3.51e-10,6;CL:0002436,3.51e-10,6;CL:0002427,3.51e-10,6;CL:0002428,3.51e-10,6;CL:0002429,3.51e-10,6;CL:0002433,3.51e-10,6;CL:0002431,3.51e-10,6;CL:0002432,3.51e-10,6;CL:0000738,3.40e-08,17;CL:0002087,3.40e-08,17;CL:0000988,5.15e-08,32;CL:0002032,5.15e-08,32;CL:0000037,5.15e-08,32;CL:0000837,5.15e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.17e-13!128;UBERON:0001555!1.17e-13!128;UBERON:0007026!1.17e-13!128;UBERON:0004119!1.25e-13!130;UBERON:0000925!1.25e-13!130;UBERON:0006595!1.25e-13!130;UBERON:0004177!1.98e-13!29;UBERON:0002193!4.06e-13!48;UBERON:0004921!1.44e-12!126;UBERON:0004185!1.44e-12!126;UBERON:0002405!4.12e-12!70;UBERON:0002390!3.93e-11!45;UBERON:0003061!3.93e-11!45;UBERON:0005057!5.60e-11!51;UBERON:0003408!3.31e-10!24;UBERON:0000077!5.17e-10!97;UBERON:0006562!8.02e-10!24;UBERON:0001557!8.02e-10!24;UBERON:0001042!8.02e-10!24;UBERON:0008814!8.02e-10!24;UBERON:0009145!8.02e-10!24;UBERON:0002370!1.19e-09!23;UBERON:0000974!1.19e-09!23;UBERON:0004807!1.19e-09!23;UBERON:0005058!1.19e-09!23;UBERON:0003351!1.19e-09!23;UBERON:0009113!1.19e-09!23;UBERON:0003295!1.19e-09!23;UBERON:0009722!1.19e-09!23;UBERON:0005562!1.19e-09!23;UBERON:0007690!1.19e-09!23;UBERON:0001041!3.46e-09!92;UBERON:0001004!7.64e-09!42;UBERON:0000065!2.30e-08!41;UBERON:0000072!6.07e-08!27;UBERON:0007023!7.28e-08!51;UBERON:0003104!1.74e-07!131;UBERON:0009142!1.74e-07!131;UBERON:0005911!3.04e-07!69;UBERON:0002530!5.63e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.96e-16,48;UBERON:0002405,1.96e-16,48;UBERON:0004177,1.55e-14,29;UBERON:0005057,1.55e-14,29;UBERON:0002390,1.61e-13,45;UBERON:0003061,1.61e-13,45;UBERON:0001007,2.04e-12,116;UBERON:0001555,2.04e-12,116;UBERON:0007026,2.04e-12,116;UBERON:0003408,2.06e-12,24;UBERON:0001004,2.30e-12,42;UBERON:0004119,5.30e-12,118;UBERON:0000925,5.30e-12,118;UBERON:0006595,5.30e-12,118;UBERON:0000065,1.27e-11,41;UBERON:0002370,1.41e-11,23;UBERON:0000974,1.41e-11,23;UBERON:0004807,1.41e-11,23;UBERON:0005058,1.41e-11,23;UBERON:0003351,1.41e-11,23;UBERON:0009113,1.41e-11,23;UBERON:0003295,1.41e-11,23;UBERON:0009722,1.41e-11,23;UBERON:0005562,1.41e-11,23;UBERON:0007690,1.41e-11,23;UBERON:0004921,4.50e-11,114;UBERON:0000077,4.69e-11,35;UBERON:0006562,6.53e-11,24;UBERON:0001557,6.53e-11,24;UBERON:0001042,6.53e-11,24;UBERON:0008814,6.53e-11,24;UBERON:0009145,6.53e-11,24;UBERON:0001041,2.10e-10,80;UBERON:0000072,3.20e-09,27;UBERON:0005911,5.21e-07,69;UBERON:0007811,8.75e-07,36;UBERON:0007023,9.36e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,305.505783262769,94.8915987302234,52.6645184224485,26.5387850749533,21.5384829287408,133.022967156547,191.188420090347,3.33109761815663,7.49158489342356,0.699561878128147,34.7008381894061,37.0208970735495,23.3414308488917,1.7008658030214,0.496454756004426,0.261199789138935,4.63978026100879,5.04700418347774,0,0,0.215471232685889,1.33016393619462,4.53654233567875,1.77384408524244,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.939347575485,114.607218437792,75.6211048070544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,1.13589289999776,0,0.289864488701678,2.58127163094416,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,3.4255163915718,38.8406825470758,2.82040064223167,0,0,0,0,0,0.376999773989026,0,1.15679485535929,0,0,1.54589062922275,0,0,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,1.61729061793121,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.486412857275134,0.438599962275997,0.439100230582101,0.805238512562231,0,0,6.93879444265976,1.05780226665418,0,0,0,0,0.22237804384487,0,0.949058123089023,0.164698954724011,1.50801125280162,0.795825888164603,2.53453313254856,0,0.648414149624083,1.99141273254367,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.295220295959204,0,0.863780147452604,0.889357881261447,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.549122826376163,0,1.48856379067401,2.49630138491648,1.26289438973556,0.358794827043824,0.482443521363367,10.9004382198297,0,0,0,0,0,0,0,1.7339865851681,1.7717175171902,1.2756381492599,6.71839590334526,5.52591941970866,4.05017364028232,0,0,1.47529281905711,3.86311444826625,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.64970122972535,3.98235415019888,0,0,0,0,0,0,0,0.712994756769443,2.84433082142234,0,0,0.680879211507576,0,0,0,0,0,0,0,0.23467170806371,0,0.661585194164886,0.16488625294148,0,0,0,0.164140899745061,1.1659233465194,0,10.0813819670733,0.82554747185289,0.740778109478847,5.65105371014073,7.51818252465638,12.3540213531522,0.679913719975421,0.559805809294632,0.138199973804424,1.90934123603023,0,0,0,0,0,0,0.41326727862668,0.26175594198403,1.03691978633434,1.86401793926078,0,0,0,0,0,0,0.117357238645754,0,0,0,0,8.21628913633263,0,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,5.04820887983869,3.39685912501528,4.34155734777035,1.752756553065,3.83139503519994,7.21188317474168,8.27421838106833,7.24636793525727,0.226730383615211,0,0,0,0.579568782096571,0.93841237725591,0.915758121336325,0.428736758158132,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0.441182838239031,0 | |||
|short_description=p2@Gimap3 | |||
}} |
Revision as of 10:10, 14 September 2013
Short description: | p2@Gimap3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gimap3_5end |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | 28bp_to_NM_031247, uc009bvt.1_5end |
EntrezGene: | Gimap3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.