FFCP PHASE1:Mm9::chr12:74685803..74685810,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18755|HGNC=|MCL_coexpression_id=1103|UniProt=P23298,D3YWQ8|association_with_transcript=19bp_to_,-19bp_to_ENSMUST00000021527,ENSMUST00000119092_5end|description=CAGE_peak_4_at_Prkch_5end|id=chr12:74685803..74685810,+|ontology_enrichment_celltype=CL:0000084!7.19e-09!11;CL:0000827!7.19e-09!11;CL:0000791!1.21e-07!9;CL:0000789!1.21e-07!9;CL:0002420!1.21e-07!9;CL:0002419!1.21e-07!9;CL:0000790!1.21e-07!9;CL:0000838!2.11e-07!12;CL:0000624!6.25e-07!8|ontology_enrichment_celltype_v019_2=CL:0000084,8.82e-14,11;CL:0000827,8.82e-14,11;CL:0000838,2.72e-12,12;CL:0000791,9.79e-12,9;CL:0000789,9.79e-12,9;CL:0002420,9.79e-12,9;CL:0002419,9.79e-12,9;CL:0000790,9.79e-12,9;CL:0000542,4.87e-11,13;CL:0000051,4.87e-11,13;CL:0000624,1.50e-10,8;CL:0000738,2.42e-10,17;CL:0002087,2.42e-10,17;CL:0000893,2.82e-08,6;CL:0002489,2.82e-08,6;CL:0000898,2.82e-08,6;CL:0000809,2.82e-08,6;CL:0000810,2.82e-08,6;CL:0000895,2.82e-08,6;CL:0000808,2.82e-08,6;CL:0000894,2.82e-08,6;CL:0000806,2.82e-08,6;CL:0000807,2.82e-08,6;CL:0000805,2.82e-08,6;CL:0002425,2.82e-08,6;CL:0002436,2.82e-08,6;CL:0002427,2.82e-08,6;CL:0002428,2.82e-08,6;CL:0002429,2.82e-08,6;CL:0002433,2.82e-08,6;CL:0002431,2.82e-08,6;CL:0002432,2.82e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!7.93e-14!41;UBERON:0001004!1.02e-13!42;UBERON:0000072!3.22e-08!27;UBERON:0000077!4.02e-08!97;UBERON:0005178!9.16e-08!17;UBERON:0005181!9.16e-08!17;UBERON:0002224!9.16e-08!17;UBERON:0000915!9.16e-08!17;UBERON:0008947!9.16e-08!17;UBERON:0003258!9.16e-08!17;UBERON:0006562!3.08e-07!24;UBERON:0001557!3.08e-07!24;UBERON:0001042!3.08e-07!24;UBERON:0008814!3.08e-07!24;UBERON:0009145!3.08e-07!24;UBERON:0000926!4.11e-07!193;UBERON:0004120!4.11e-07!193;UBERON:0006603!4.11e-07!193;UBERON:0001041!8.35e-07!92;UBERON:0002048!8.40e-07!14;UBERON:0000117!8.40e-07!14;UBERON:0000171!8.40e-07!14;UBERON:0000170!8.40e-07!14;UBERON:0005597!8.40e-07!14;UBERON:0000118!8.40e-07!14;UBERON:0005153!8.42e-07!17;UBERON:0002370!9.41e-07!23;UBERON:0000974!9.41e-07!23;UBERON:0004807!9.41e-07!23;UBERON:0005058!9.41e-07!23;UBERON:0003351!9.41e-07!23;UBERON:0009113!9.41e-07!23;UBERON:0003295!9.41e-07!23;UBERON:0009722!9.41e-07!23;UBERON:0005562!9.41e-07!23;UBERON:0007690!9.41e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000065,8.44e-20,41;UBERON:0001004,4.65e-19,42;UBERON:0000072,4.96e-12,27;UBERON:0006562,2.06e-10,24;UBERON:0001557,2.06e-10,24;UBERON:0001042,2.06e-10,24;UBERON:0008814,2.06e-10,24;UBERON:0009145,2.06e-10,24;UBERON:0001041,2.64e-10,80;UBERON:0005178,2.66e-10,17;UBERON:0005181,2.66e-10,17;UBERON:0002224,2.66e-10,17;UBERON:0000915,2.66e-10,17;UBERON:0008947,2.66e-10,17;UBERON:0003258,2.66e-10,17;UBERON:0000077,8.42e-10,35;UBERON:0002370,1.27e-09,23;UBERON:0000974,1.27e-09,23;UBERON:0004807,1.27e-09,23;UBERON:0005058,1.27e-09,23;UBERON:0003351,1.27e-09,23;UBERON:0009113,1.27e-09,23;UBERON:0003295,1.27e-09,23;UBERON:0009722,1.27e-09,23;UBERON:0005562,1.27e-09,23;UBERON:0007690,1.27e-09,23;UBERON:0003408,5.30e-09,24;UBERON:0002048,1.08e-08,14;UBERON:0000117,1.08e-08,14;UBERON:0000171,1.08e-08,14;UBERON:0000170,1.08e-08,14;UBERON:0005597,1.08e-08,14;UBERON:0000118,1.08e-08,14;UBERON:0005911,2.58e-08,69;UBERON:0005153,5.94e-08,17|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,7.36002943616985,16.7538579360483,9.83071010552373,5.30775701499065,5.10541817570153,8.73123722649149,5.07038334030185,0.666219523631325,0.404950534779652,0,0.630924330716475,1.09691546884591,0.42438965179803,0.680346321208558,3.07801948722744,4.4403964153619,0,0,0.57423196411502,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0,1.17646297606203,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,10.8804321301702,17.1407837562657,0,0.286533439938757,0,0,1.05798195854407,0,0,0,1.7997994345628,0.988866362566974,1.4209602298922,0.898800331555214,1.15265491596466,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0.220868540951614,0,0,0,0,1.40456071893706,0.153606533256243,0.395658863190582,0.914876436024097,1.04182674111352,0,0.56276261003168,0.15279824777681,0.294628585473668,0,0.372798891650601,0.151452386666368,0.226714680320357,7.53647670624362,2.58127163094416,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,1.01104889002957,0.45673551887624,4.66088190564909,1.03909497345377,0.693941307064543,0.304465478312141,0.230615497256059,0.753613202763113,0.470354828542819,0.628332956648377,0.741584903203122,0.86759614151947,0,0.161766849947409,0.883366073841574,0.969750506270444,0,0.292780797011547,0,0.510914110417183,0.239630249011841,0,0,0.299581278809645,1.83000241127451,0.376963056338593,0.173824320192276,0,1.0389402227978,1.78465389374533,0.407357455401265,1.36847667671102,1.0108910337347,0.420883711772948,0.130120442962704,0.689706313300419,0.720248519221397,0.60281927134286,0.95251098811859,0.384341160854549,1.49922759295566,0.776110112217047,0,1.13463648100692,0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| ||
|EntrezGene=18755 | |||
|HGNC= | |||
|MCL_coexpression_id=1103 | |||
|UniProt=P23298,D3YWQ8 | |||
|association_with_transcript=19bp_to_,-19bp_to_ENSMUST00000021527,ENSMUST00000119092_5end | |||
|description=CAGE_peak_4_at_Prkch_5end | |||
|id=chr12:74685803..74685810,+ | |||
|ontology_enrichment_celltype=CL:0000084!7.19e-09!11;CL:0000827!7.19e-09!11;CL:0000791!1.21e-07!9;CL:0000789!1.21e-07!9;CL:0002420!1.21e-07!9;CL:0002419!1.21e-07!9;CL:0000790!1.21e-07!9;CL:0000838!2.11e-07!12;CL:0000624!6.25e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,8.82e-14,11;CL:0000827,8.82e-14,11;CL:0000838,2.72e-12,12;CL:0000791,9.79e-12,9;CL:0000789,9.79e-12,9;CL:0002420,9.79e-12,9;CL:0002419,9.79e-12,9;CL:0000790,9.79e-12,9;CL:0000542,4.87e-11,13;CL:0000051,4.87e-11,13;CL:0000624,1.50e-10,8;CL:0000738,2.42e-10,17;CL:0002087,2.42e-10,17;CL:0000893,2.82e-08,6;CL:0002489,2.82e-08,6;CL:0000898,2.82e-08,6;CL:0000809,2.82e-08,6;CL:0000810,2.82e-08,6;CL:0000895,2.82e-08,6;CL:0000808,2.82e-08,6;CL:0000894,2.82e-08,6;CL:0000806,2.82e-08,6;CL:0000807,2.82e-08,6;CL:0000805,2.82e-08,6;CL:0002425,2.82e-08,6;CL:0002436,2.82e-08,6;CL:0002427,2.82e-08,6;CL:0002428,2.82e-08,6;CL:0002429,2.82e-08,6;CL:0002433,2.82e-08,6;CL:0002431,2.82e-08,6;CL:0002432,2.82e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!7.93e-14!41;UBERON:0001004!1.02e-13!42;UBERON:0000072!3.22e-08!27;UBERON:0000077!4.02e-08!97;UBERON:0005178!9.16e-08!17;UBERON:0005181!9.16e-08!17;UBERON:0002224!9.16e-08!17;UBERON:0000915!9.16e-08!17;UBERON:0008947!9.16e-08!17;UBERON:0003258!9.16e-08!17;UBERON:0006562!3.08e-07!24;UBERON:0001557!3.08e-07!24;UBERON:0001042!3.08e-07!24;UBERON:0008814!3.08e-07!24;UBERON:0009145!3.08e-07!24;UBERON:0000926!4.11e-07!193;UBERON:0004120!4.11e-07!193;UBERON:0006603!4.11e-07!193;UBERON:0001041!8.35e-07!92;UBERON:0002048!8.40e-07!14;UBERON:0000117!8.40e-07!14;UBERON:0000171!8.40e-07!14;UBERON:0000170!8.40e-07!14;UBERON:0005597!8.40e-07!14;UBERON:0000118!8.40e-07!14;UBERON:0005153!8.42e-07!17;UBERON:0002370!9.41e-07!23;UBERON:0000974!9.41e-07!23;UBERON:0004807!9.41e-07!23;UBERON:0005058!9.41e-07!23;UBERON:0003351!9.41e-07!23;UBERON:0009113!9.41e-07!23;UBERON:0003295!9.41e-07!23;UBERON:0009722!9.41e-07!23;UBERON:0005562!9.41e-07!23;UBERON:0007690!9.41e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,8.44e-20,41;UBERON:0001004,4.65e-19,42;UBERON:0000072,4.96e-12,27;UBERON:0006562,2.06e-10,24;UBERON:0001557,2.06e-10,24;UBERON:0001042,2.06e-10,24;UBERON:0008814,2.06e-10,24;UBERON:0009145,2.06e-10,24;UBERON:0001041,2.64e-10,80;UBERON:0005178,2.66e-10,17;UBERON:0005181,2.66e-10,17;UBERON:0002224,2.66e-10,17;UBERON:0000915,2.66e-10,17;UBERON:0008947,2.66e-10,17;UBERON:0003258,2.66e-10,17;UBERON:0000077,8.42e-10,35;UBERON:0002370,1.27e-09,23;UBERON:0000974,1.27e-09,23;UBERON:0004807,1.27e-09,23;UBERON:0005058,1.27e-09,23;UBERON:0003351,1.27e-09,23;UBERON:0009113,1.27e-09,23;UBERON:0003295,1.27e-09,23;UBERON:0009722,1.27e-09,23;UBERON:0005562,1.27e-09,23;UBERON:0007690,1.27e-09,23;UBERON:0003408,5.30e-09,24;UBERON:0002048,1.08e-08,14;UBERON:0000117,1.08e-08,14;UBERON:0000171,1.08e-08,14;UBERON:0000170,1.08e-08,14;UBERON:0005597,1.08e-08,14;UBERON:0000118,1.08e-08,14;UBERON:0005911,2.58e-08,69;UBERON:0005153,5.94e-08,17 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,7.36002943616985,16.7538579360483,9.83071010552373,5.30775701499065,5.10541817570153,8.73123722649149,5.07038334030185,0.666219523631325,0.404950534779652,0,0.630924330716475,1.09691546884591,0.42438965179803,0.680346321208558,3.07801948722744,4.4403964153619,0,0,0.57423196411502,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0,1.17646297606203,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,10.8804321301702,17.1407837562657,0,0.286533439938757,0,0,1.05798195854407,0,0,0,1.7997994345628,0.988866362566974,1.4209602298922,0.898800331555214,1.15265491596466,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0.220868540951614,0,0,0,0,1.40456071893706,0.153606533256243,0.395658863190582,0.914876436024097,1.04182674111352,0,0.56276261003168,0.15279824777681,0.294628585473668,0,0.372798891650601,0.151452386666368,0.226714680320357,7.53647670624362,2.58127163094416,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,1.01104889002957,0.45673551887624,4.66088190564909,1.03909497345377,0.693941307064543,0.304465478312141,0.230615497256059,0.753613202763113,0.470354828542819,0.628332956648377,0.741584903203122,0.86759614151947,0,0.161766849947409,0.883366073841574,0.969750506270444,0,0.292780797011547,0,0.510914110417183,0.239630249011841,0,0,0.299581278809645,1.83000241127451,0.376963056338593,0.173824320192276,0,1.0389402227978,1.78465389374533,0.407357455401265,1.36847667671102,1.0108910337347,0.420883711772948,0.130120442962704,0.689706313300419,0.720248519221397,0.60281927134286,0.95251098811859,0.384341160854549,1.49922759295566,0.776110112217047,0,1.13463648100692,0.175951124163949,0.657587197282725,0,1.39300866608867,0.61734640922383,0.199034266818493,0,0.257347907114715,0,1.24275463521301,0.469052119962192,0.720248245844059,0,0.983821158737019,1.07986979021165,0.465067889500816,0,0.817357396570186,0.987359099480883,0.985004784474571,1.4592385718254,1.02339991197733,1.3173006917463,2.14730270016595,0.420579897128254,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0.38660238396628,0.605050573870028,0.444756087689741,0.380451252225118,0,0.329397909448022,1.00534083520108,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.379335801906163,0.571242563048644,0,0.610953983535943,0.775809948670503,0.911765658574141,1.07502113111237,0.885660887877613,0.156998727841375,0.370191491765402,0.296452627087149,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0,1.09824565275233,0,1.11642284300551,0.312037673114561,0,1.07638448113147,0.482443521363367,4.80358294433172,1.13694847062291,0.814824882210129,1.01847051465113,1.64283173801951,0.670025029767263,1.42826184531608,1.95133647857799,2.67979744980525,1.55025282754142,3.02964060449226,3.93271955317771,2.59027472798843,2.74833211304872,0,2.17562273527484,0.983528546038072,2.20749397043786,0.160550589987792,0.234423373184406,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0.99358059645788,0.890328018336276,0.325773918707152,0.824850614862677,2.65490276679926,0,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,0,1.06949213515416,0.316036757935816,0,1.03135543248187,0.680879211507576,0.720244376125241,0.776152102696527,1.92903331528433,0.709360934569094,0.713475270408282,0.822745103010605,0,4.92810586933792,2.96564899209348,0.220528398054962,2.63818004706368,1.93757312035087,1.56813604813205,1.67121281604391,3.44695889464629,0.582961673259701,0.370850604021019,0.854354403989263,0.82554747185289,0.370389054739423,0.188368457004691,0.683471138605126,0.457556346413045,2.54967644990783,1.53946597556024,2.3493995546752,0.954670618015114,0.474503990371703,0.203319467126849,1.18805874903981,1.46361807210128,1.09181281873089,0.269728692769641,0.991841468704031,0.523511883968059,0,0.621339313086926,0.56369293868419,0.448549638131936,0,0.194451188344048,0.387479470433193,0.337912250981556,0,0.5208175393758,0.104859344425711,0,0,1.89606672376907,1.62180172232131,0.924398614483445,1.16928740680016,1.25318686967237,1.39076948346885,1.44234539423963,1.77227432609493,1.00966449948148,0.838274873204998,0.907435666231565,1.94915761479505,2.02044867444692,1.8700304349051,2.26730383615211,0.221985953374065,0.0897138566094757,0.503653849092235,1.9318959403219,1.87682475451182,1.46521299413812,3.00115730710692,1.50471631210609,0,0,0,0,0,0.755393897389701,0,0,0.453142408984205,0,0.518936737920883,0,0.170733605754134,0.486213434136588,0.419226325255965,0.551530525350042,0.888986911206461,0.618105171716683,0,0.505394423527595,0.760437899670719,0.754505365544305,0.655490552289177,0.89635213366817,0.804096565378586,0.476293691283074,0.927074607558844,0.964546102318525,0.824171801606613,1.17759136107518,0.342869252385415,0.70990322463735,0.476872379894642,0.290692833264657,0.752875043322645,0.507687647350059,0.914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| |||
|short_description=p4@Prkch | |||
}} |
Revision as of 23:10, 12 September 2013
Short description: | p4@Prkch |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Prkch_5end |
Coexpression cluster: | MCL_coexpression_mm9:1103 |
Association with transcript: | 19bp_to_, -19bp_to_ENSMUST00000021527, ENSMUST00000119092_5end |
EntrezGene: | Prkch |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.