FFCP PHASE1:Mm9::chr11:50767247..50767270,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=19127|HGNC=|MCL_coexpression_id=1075|UniProt=E0CZF7|association_with_transcript=0bp_to_ENSMUST00000162420_5end|description=CAGE_peak_1_at_Prop1_5end|id=chr11:50767247..50767270,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000007!5.96e-48!8;UBERON:0003296!5.96e-48!8;UBERON:0010133!5.96e-48!8;UBERON:0001894!3.06e-38!10;UBERON:0006222!3.06e-38!10;UBERON:0002780!3.20e-09!39;UBERON:0001890!3.20e-09!39;UBERON:0006240!3.20e-09!39;UBERON:0003056!4.67e-09!49;UBERON:0003080!5.72e-09!40;UBERON:0002616!3.71e-07!49;UBERON:0000955!5.38e-07!50;UBERON:0006238!5.38e-07!50;UBERON:0000033!8.49e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.53e-77,8;UBERON:0003296,2.53e-77,8;UBERON:0010133,2.53e-77,8;UBERON:0001894,6.80e-62,10;UBERON:0006222,6.80e-62,10;UBERON:0003056,7.21e-16,49;UBERON:0002780,7.71e-16,39;UBERON:0001890,7.71e-16,39;UBERON:0006240,7.71e-16,39;UBERON:0003080,1.94e-15,40;UBERON:0002616,2.12e-13,46;UBERON:0000955,4.14e-13,47;UBERON:0006238,4.14e-13,47;UBERON:0002346,4.30e-12,64;UBERON:0003075,4.30e-12,64;UBERON:0007284,4.30e-12,64;UBERON:0001049,7.95e-12,52;UBERON:0005068,7.95e-12,52;UBERON:0006241,7.95e-12,52;UBERON:0007135,7.95e-12,52;UBERON:0000073,2.23e-11,54;UBERON:0010371,1.45e-10,73;UBERON:0002368,3.26e-10,60;UBERON:0002530,2.10e-09,65;UBERON:0000949,1.85e-08,72;UBERON:0001017,2.45e-08,73;UBERON:0010314,2.60e-08,92;UBERON:0001016,4.18e-08,75;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99277018814219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,60.3204665004889,82.5308402533974,62.3720771941934,34.5813455602433,24.2581591938816,14.1512157717824,8.52501857520878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Prop1}} | ||
|EntrezGene=19127 | |||
|HGNC= | |||
|MCL_coexpression_id=1075 | |||
|UniProt=E0CZF7 | |||
|association_with_transcript=0bp_to_ENSMUST00000162420_5end | |||
|description=CAGE_peak_1_at_Prop1_5end | |||
|id=chr11:50767247..50767270,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!5.96e-48!8;UBERON:0003296!5.96e-48!8;UBERON:0010133!5.96e-48!8;UBERON:0001894!3.06e-38!10;UBERON:0006222!3.06e-38!10;UBERON:0002780!3.20e-09!39;UBERON:0001890!3.20e-09!39;UBERON:0006240!3.20e-09!39;UBERON:0003056!4.67e-09!49;UBERON:0003080!5.72e-09!40;UBERON:0002616!3.71e-07!49;UBERON:0000955!5.38e-07!50;UBERON:0006238!5.38e-07!50;UBERON:0000033!8.49e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.53e-77,8;UBERON:0003296,2.53e-77,8;UBERON:0010133,2.53e-77,8;UBERON:0001894,6.80e-62,10;UBERON:0006222,6.80e-62,10;UBERON:0003056,7.21e-16,49;UBERON:0002780,7.71e-16,39;UBERON:0001890,7.71e-16,39;UBERON:0006240,7.71e-16,39;UBERON:0003080,1.94e-15,40;UBERON:0002616,2.12e-13,46;UBERON:0000955,4.14e-13,47;UBERON:0006238,4.14e-13,47;UBERON:0002346,4.30e-12,64;UBERON:0003075,4.30e-12,64;UBERON:0007284,4.30e-12,64;UBERON:0001049,7.95e-12,52;UBERON:0005068,7.95e-12,52;UBERON:0006241,7.95e-12,52;UBERON:0007135,7.95e-12,52;UBERON:0000073,2.23e-11,54;UBERON:0010371,1.45e-10,73;UBERON:0002368,3.26e-10,60;UBERON:0002530,2.10e-09,65;UBERON:0000949,1.85e-08,72;UBERON:0001017,2.45e-08,73;UBERON:0010314,2.60e-08,92;UBERON:0001016,4.18e-08,75;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99277018814219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,60.3204665004889,82.5308402533974,62.3720771941934,34.5813455602433,24.2581591938816,14.1512157717824,8.52501857520878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Prop1 | |||
}} |
Revision as of 19:50, 12 September 2013
Short description: | p1@Prop1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Prop1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1075 |
Association with transcript: | 0bp_to_ENSMUST00000162420_5end |
EntrezGene: | Prop1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.53e-77 | 8 |
gland of diencephalon | 2.53e-77 | 8 |
neuroendocrine gland | 2.53e-77 | 8 |
diencephalon | 6.80e-62 | 10 |
future diencephalon | 6.80e-62 | 10 |
pre-chordal neural plate | 7.21e-16 | 49 |
regional part of forebrain | 7.71e-16 | 39 |
forebrain | 7.71e-16 | 39 |
future forebrain | 7.71e-16 | 39 |
anterior neural tube | 1.94e-15 | 40 |
regional part of brain | 2.12e-13 | 46 |
brain | 4.14e-13 | 47 |
future brain | 4.14e-13 | 47 |
neurectoderm | 4.30e-12 | 64 |
neural plate | 4.30e-12 | 64 |
presumptive neural plate | 4.30e-12 | 64 |
neural tube | 7.95e-12 | 52 |
neural rod | 7.95e-12 | 52 |
future spinal cord | 7.95e-12 | 52 |
neural keel | 7.95e-12 | 52 |
regional part of nervous system | 2.23e-11 | 54 |
ecto-epithelium | 1.45e-10 | 73 |
endocrine gland | 3.26e-10 | 60 |
gland | 2.10e-09 | 65 |
endocrine system | 1.85e-08 | 72 |
central nervous system | 2.45e-08 | 73 |
structure with developmental contribution from neural crest | 2.60e-08 | 92 |
nervous system | 4.18e-08 | 75 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.