FFCP PHASE1:Mm9::chr2:121129461..121129479,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:121129461..121129479,+|id=chr2:121129461..121129479,+|ontology_enrichment_celltype=CL:0000055!1.06e-18!50;CL:0002319!5.72e-18!43;CL:0000221!9.96e-18!44;CL:0000133!9.96e-18!44;CL:0000393!2.13e-16!39;CL:0000211!2.13e-16!39;CL:0000540!5.99e-15!33;CL:0000047!5.99e-15!33;CL:0000031!5.99e-15!33;CL:0000404!5.99e-15!33;CL:0000117!9.85e-14!23;CL:0000337!9.85e-14!23;CL:0002321!1.31e-08!70;CL:0000220!1.31e-08!70|ontology_enrichment_celltype_v019_2=CL:0002319,2.61e-26,43;CL:0000221,1.72e-25,44;CL:0000133,1.72e-25,44;CL:0000117,1.87e-20,23;CL:0000337,1.87e-20,23;CL:0000540,4.97e-20,33;CL:0000047,4.97e-20,33;CL:0000031,4.97e-20,33;CL:0000404,4.97e-20,33;CL:0000393,2.85e-17,39;CL:0000211,2.85e-17,39;CL:0002321,1.49e-13,70;CL:0002453,2.87e-07,8;CL:0000333,4.98e-07,10;CL:0000095,4.98e-07,10;CL:0000243,4.98e-07,10;CL:0000123,4.98e-07,10;CL:0000125,4.98e-07,10;CL:0000030,4.98e-07,10;CL:0000339,4.98e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.15e-32!75;UBERON:0001016!1.15e-32!75;UBERON:0001017!1.76e-32!73;UBERON:0005743!1.76e-32!73;UBERON:0004121!6.26e-26!102;UBERON:0000924!6.26e-26!102;UBERON:0006601!6.26e-26!102;UBERON:0001049!1.48e-24!52;UBERON:0005068!1.48e-24!52;UBERON:0006241!1.48e-24!52;UBERON:0007135!1.48e-24!52;UBERON:0002346!3.28e-24!71;UBERON:0003075!3.28e-24!71;UBERON:0007284!3.28e-24!71;UBERON:0000955!1.88e-23!50;UBERON:0006238!1.88e-23!50;UBERON:0002616!8.80e-23!49;UBERON:0000033!8.93e-22!63;UBERON:0002020!1.75e-21!34;UBERON:0002791!4.53e-18!29;UBERON:0003528!4.53e-18!29;UBERON:0001893!4.53e-18!29;UBERON:0003056!9.35e-17!49;UBERON:0003080!1.05e-16!40;UBERON:0002780!4.55e-16!39;UBERON:0001890!4.55e-16!39;UBERON:0006240!4.55e-16!39;UBERON:0000956!1.65e-13!21;UBERON:0001869!1.65e-13!21;UBERON:0000203!1.65e-13!21;UBERON:0002619!1.27e-11!17;UBERON:0007811!2.26e-10!86;UBERON:0000025!3.48e-10!114;UBERON:0000153!5.04e-09!94;UBERON:0004111!6.39e-09!122;UBERON:0002021!9.31e-09!10;UBERON:0000411!9.31e-09!10;UBERON:0001950!9.31e-09!10;UBERON:0003076!1.32e-08!12;UBERON:0003057!1.32e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.57e-51,75;UBERON:0001017,1.80e-51,73;UBERON:0000073,2.39e-42,54;UBERON:0004121,1.01e-40,95;UBERON:0000924,1.01e-40,95;UBERON:0006601,1.01e-40,95;UBERON:0001049,5.52e-39,52;UBERON:0005068,5.52e-39,52;UBERON:0006241,5.52e-39,52;UBERON:0007135,5.52e-39,52;UBERON:0002346,4.09e-36,64;UBERON:0003075,4.09e-36,64;UBERON:0007284,4.09e-36,64;UBERON:0002020,2.24e-35,34;UBERON:0000955,2.80e-32,47;UBERON:0006238,2.80e-32,47;UBERON:0002616,4.70e-31,46;UBERON:0010371,4.73e-30,73;UBERON:0003528,9.42e-29,29;UBERON:0002791,9.42e-29,29;UBERON:0001893,9.42e-29,29;UBERON:0003080,2.92e-24,40;UBERON:0002780,4.38e-23,39;UBERON:0001890,4.38e-23,39;UBERON:0006240,4.38e-23,39;UBERON:0010314,2.40e-22,92;UBERON:0000956,1.80e-21,21;UBERON:0001869,1.80e-21,21;UBERON:0000203,1.80e-21,21;UBERON:0003056,4.76e-21,49;UBERON:0002619,1.04e-17,17;UBERON:0002021,9.09e-16,10;UBERON:0000411,9.09e-16,10;UBERON:0001950,9.09e-16,10;UBERON:0003076,1.82e-15,12;UBERON:0003057,1.82e-15,12;UBERON:0000025,9.38e-14,114;UBERON:0004111,4.60e-12,122;UBERON:0011216,1.99e-11,194;UBERON:0002240,5.71e-09,6;UBERON:0005174,5.71e-09,6;UBERON:0001137,5.71e-09,6;UBERON:0002420,2.72e-08,8;UBERON:0007245,2.72e-08,8;UBERON:0010009,2.72e-08,8;UBERON:0010011,2.72e-08,8;UBERON:0000454,2.72e-08,8;UBERON:0004733,5.00e-08,6;UBERON:0004732,5.00e-08,6;UBERON:0002028,5.00e-08,6;UBERON:0007277,5.00e-08,6;UBERON:0001948,1.11e-07,5;UBERON:0002315,1.11e-07,5;UBERON:0000483,4.52e-07,174;UBERON:0002950,6.53e-07,4;UBERON:0001891,6.53e-07,4;UBERON:0009616,6.53e-07,4;UBERON:0010286,6.53e-07,4;UBERON:0000119,7.42e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.304130793658544,1.46837401729345,1.56478268869608,3.2703773457067,2.63623419281366,2.91644848611425,1.53985063787899,0,0,0,0,0.514518872071894,0.573066879877513,0.515672092277442,1.21389876515759,2.64495489636016,1.26766280701236,0,0,0.449949858640699,0,0,1.79760066311043,3.45796474789399,1.24427534770173,2.16009501330705,1.05162480675691,10.5690864229407,6.40518768759679,0.489963196859816,1.72521847832825,0.919218786610021,17.6185409599022,40.7322608491749,41.9345835789545,1.71452174049252,3.56801810049398,0.52091337055676,13.1216009530649,8.4414391504752,20.1693687065389,17.3830865429464,10.9626194215309,1.4911955666024,0.075726193333184,1.058001841495,0,0,0,0.539703191637817,0,0,0.140444420131752,1.36344258062446,0.779358013808606,0.70667914902068,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.705532242814229,0,0,0,0,0.323533699894818,0,0.484875253135222,0,3.22058876712702,3.56059401582874,0,0,0,0,6.29120685500255,7.77751024791665,1.13088916901578,5.73620256634512,7.16003280524926,4.98691306942944,6.81413304884582,0,0,0,0,0.520481771850815,0,0.360124259610698,0.753524089178575,0.544291993210623,1.0249097622788,0.0937017245597288,3.3631438196072,0,0,0,0,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.703578179943289,0.36012412292203,0.23674473558521,0.393528463494808,0.308534225774757,1.39520366850245,0.804820204198858,0.467061369468678,0,0.492502392237286,0.0810688095458557,0,0,0,3.57492912559016,1.44066457330998,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0.38992817423824,0,0,0,0,0.342745537829186,0,0.814605311381257,0.193952487167626,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0.637819074629948,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,4.49541651965817,7.3843362553088,0.655739781506702,0.252470927204373,0.631016438832513,1.17131623288992,2.15423397732799,0.955875191810208,1.11399337041197,1.13230612315533,0.809621403349789,2.33804686329049,0,4.81981974632711,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0.307435147943927,0,0,0.712994756769443,0,0,0,0,0.18006109403131,0.517434735131018,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,8.34413859047294,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.330613822901344,0.523511883968059,0,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.258319646955462,0.844780627453891,0.938857909166032,0,0,0.241584120826006,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0.0897138566094757,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,32.7556068717899,18.8733346967943,21.1971339972577,12.7171354934329,7.53590771747707,15.8632718451837,11.4753825039407,15.7612421128477,15.406841905463,26.9235362110946,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0,0,0.206035057238894,1.60459604795908,0.252697211763798,0,0.188626341386076,0.655490552289177,0.256100609619477,0,0,0.463537303779422,0.38581844092741,0,0,1.37147700954166,0.354951612318675,0.238436189947321,0.436039249896986,0.282328141245992,0.592302255241736,0.182927972872773,0.789209134313529,1.08643291076689,0.561142271657738,0.355905054372522,0.394017929502254,0,0,0,0.249810577937946,0,0,0.382576664137687,0.220591419119515,0|short_description=p@chr2:121129461..121129479,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:121129461..121129479,+ | |||
|id=chr2:121129461..121129479,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.06e-18!50;CL:0002319!5.72e-18!43;CL:0000221!9.96e-18!44;CL:0000133!9.96e-18!44;CL:0000393!2.13e-16!39;CL:0000211!2.13e-16!39;CL:0000540!5.99e-15!33;CL:0000047!5.99e-15!33;CL:0000031!5.99e-15!33;CL:0000404!5.99e-15!33;CL:0000117!9.85e-14!23;CL:0000337!9.85e-14!23;CL:0002321!1.31e-08!70;CL:0000220!1.31e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.61e-26,43;CL:0000221,1.72e-25,44;CL:0000133,1.72e-25,44;CL:0000117,1.87e-20,23;CL:0000337,1.87e-20,23;CL:0000540,4.97e-20,33;CL:0000047,4.97e-20,33;CL:0000031,4.97e-20,33;CL:0000404,4.97e-20,33;CL:0000393,2.85e-17,39;CL:0000211,2.85e-17,39;CL:0002321,1.49e-13,70;CL:0002453,2.87e-07,8;CL:0000333,4.98e-07,10;CL:0000095,4.98e-07,10;CL:0000243,4.98e-07,10;CL:0000123,4.98e-07,10;CL:0000125,4.98e-07,10;CL:0000030,4.98e-07,10;CL:0000339,4.98e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.15e-32!75;UBERON:0001016!1.15e-32!75;UBERON:0001017!1.76e-32!73;UBERON:0005743!1.76e-32!73;UBERON:0004121!6.26e-26!102;UBERON:0000924!6.26e-26!102;UBERON:0006601!6.26e-26!102;UBERON:0001049!1.48e-24!52;UBERON:0005068!1.48e-24!52;UBERON:0006241!1.48e-24!52;UBERON:0007135!1.48e-24!52;UBERON:0002346!3.28e-24!71;UBERON:0003075!3.28e-24!71;UBERON:0007284!3.28e-24!71;UBERON:0000955!1.88e-23!50;UBERON:0006238!1.88e-23!50;UBERON:0002616!8.80e-23!49;UBERON:0000033!8.93e-22!63;UBERON:0002020!1.75e-21!34;UBERON:0002791!4.53e-18!29;UBERON:0003528!4.53e-18!29;UBERON:0001893!4.53e-18!29;UBERON:0003056!9.35e-17!49;UBERON:0003080!1.05e-16!40;UBERON:0002780!4.55e-16!39;UBERON:0001890!4.55e-16!39;UBERON:0006240!4.55e-16!39;UBERON:0000956!1.65e-13!21;UBERON:0001869!1.65e-13!21;UBERON:0000203!1.65e-13!21;UBERON:0002619!1.27e-11!17;UBERON:0007811!2.26e-10!86;UBERON:0000025!3.48e-10!114;UBERON:0000153!5.04e-09!94;UBERON:0004111!6.39e-09!122;UBERON:0002021!9.31e-09!10;UBERON:0000411!9.31e-09!10;UBERON:0001950!9.31e-09!10;UBERON:0003076!1.32e-08!12;UBERON:0003057!1.32e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.57e-51,75;UBERON:0001017,1.80e-51,73;UBERON:0000073,2.39e-42,54;UBERON:0004121,1.01e-40,95;UBERON:0000924,1.01e-40,95;UBERON:0006601,1.01e-40,95;UBERON:0001049,5.52e-39,52;UBERON:0005068,5.52e-39,52;UBERON:0006241,5.52e-39,52;UBERON:0007135,5.52e-39,52;UBERON:0002346,4.09e-36,64;UBERON:0003075,4.09e-36,64;UBERON:0007284,4.09e-36,64;UBERON:0002020,2.24e-35,34;UBERON:0000955,2.80e-32,47;UBERON:0006238,2.80e-32,47;UBERON:0002616,4.70e-31,46;UBERON:0010371,4.73e-30,73;UBERON:0003528,9.42e-29,29;UBERON:0002791,9.42e-29,29;UBERON:0001893,9.42e-29,29;UBERON:0003080,2.92e-24,40;UBERON:0002780,4.38e-23,39;UBERON:0001890,4.38e-23,39;UBERON:0006240,4.38e-23,39;UBERON:0010314,2.40e-22,92;UBERON:0000956,1.80e-21,21;UBERON:0001869,1.80e-21,21;UBERON:0000203,1.80e-21,21;UBERON:0003056,4.76e-21,49;UBERON:0002619,1.04e-17,17;UBERON:0002021,9.09e-16,10;UBERON:0000411,9.09e-16,10;UBERON:0001950,9.09e-16,10;UBERON:0003076,1.82e-15,12;UBERON:0003057,1.82e-15,12;UBERON:0000025,9.38e-14,114;UBERON:0004111,4.60e-12,122;UBERON:0011216,1.99e-11,194;UBERON:0002240,5.71e-09,6;UBERON:0005174,5.71e-09,6;UBERON:0001137,5.71e-09,6;UBERON:0002420,2.72e-08,8;UBERON:0007245,2.72e-08,8;UBERON:0010009,2.72e-08,8;UBERON:0010011,2.72e-08,8;UBERON:0000454,2.72e-08,8;UBERON:0004733,5.00e-08,6;UBERON:0004732,5.00e-08,6;UBERON:0002028,5.00e-08,6;UBERON:0007277,5.00e-08,6;UBERON:0001948,1.11e-07,5;UBERON:0002315,1.11e-07,5;UBERON:0000483,4.52e-07,174;UBERON:0002950,6.53e-07,4;UBERON:0001891,6.53e-07,4;UBERON:0009616,6.53e-07,4;UBERON:0010286,6.53e-07,4;UBERON:0000119,7.42e-07,176 | |||
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|short_description=p@chr2:121129461..121129479,+ | |||
}} |
Revision as of 21:51, 13 September 2013
Short description: | p@chr2:121129461..121129479, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:121129461..121129479, + |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.61e-26 | 43 |
ectodermal cell | 1.72e-25 | 44 |
neurectodermal cell | 1.72e-25 | 44 |
CNS neuron (sensu Vertebrata) | 1.87e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.87e-20 | 23 |
neuron | 4.97e-20 | 33 |
neuronal stem cell | 4.97e-20 | 33 |
neuroblast | 4.97e-20 | 33 |
electrically signaling cell | 4.97e-20 | 33 |
electrically responsive cell | 2.85e-17 | 39 |
electrically active cell | 2.85e-17 | 39 |
embryonic cell | 1.49e-13 | 70 |
oligodendrocyte precursor cell | 2.87e-07 | 8 |
migratory neural crest cell | 4.98e-07 | 10 |
neuron associated cell | 4.98e-07 | 10 |
glial cell (sensu Vertebrata) | 4.98e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.98e-07 | 10 |
glial cell | 4.98e-07 | 10 |
glioblast | 4.98e-07 | 10 |
glioblast (sensu Vertebrata) | 4.98e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.