FFCP PHASE1:Mm9::chr18:10182126..10182149,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19877|HGNC=|MCL_coexpression_id=317|UniProt=P70335,Q3UE22|association_with_transcript=-336bp_to_ENSMUST00000067947,NM_009071,uc008eaq.1,uc008ear.1_5end|description=CAGE_peak_5_at_Rock1_5end|id=chr18:10182126..10182149,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!4.45e-14!128;UBERON:0001555!4.45e-14!128;UBERON:0007026!4.45e-14!128;UBERON:0004921!9.57e-14!126;UBERON:0004185!9.57e-14!126;UBERON:0005911!1.10e-13!69;UBERON:0004119!1.82e-13!130;UBERON:0000925!1.82e-13!130;UBERON:0006595!1.82e-13!130;UBERON:0001041!6.39e-13!92;UBERON:0000077!1.15e-12!97;UBERON:0002405!9.31e-11!70;UBERON:0003929!3.83e-10!55;UBERON:0005057!4.93e-10!51;UBERON:0003104!1.67e-09!131;UBERON:0009142!1.67e-09!131;UBERON:0000926!1.83e-09!193;UBERON:0004120!1.83e-09!193;UBERON:0006603!1.83e-09!193;UBERON:0001004!2.45e-09!42;UBERON:0000065!6.20e-09!41;UBERON:0000490!1.12e-08!66;UBERON:0001048!6.29e-08!147;UBERON:0002193!6.93e-08!48;UBERON:0004177!1.46e-07!29;UBERON:0002390!3.22e-07!45;UBERON:0003061!3.22e-07!45;UBERON:0003408!3.66e-07!24;UBERON:0002530!4.77e-07!65;UBERON:0002370!9.34e-07!23;UBERON:0000974!9.34e-07!23;UBERON:0004807!9.34e-07!23;UBERON:0005058!9.34e-07!23;UBERON:0003351!9.34e-07!23;UBERON:0009113!9.34e-07!23;UBERON:0003295!9.34e-07!23;UBERON:0009722!9.34e-07!23;UBERON:0005562!9.34e-07!23;UBERON:0007690!9.34e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0005911,9.78e-14,69;UBERON:0001007,2.58e-13,116;UBERON:0001555,2.58e-13,116;UBERON:0007026,2.58e-13,116;UBERON:0004921,5.32e-13,114;UBERON:0004119,1.08e-12,118;UBERON:0000925,1.08e-12,118;UBERON:0006595,1.08e-12,118;UBERON:0001041,1.63e-12,80;UBERON:0003929,3.43e-10,55;UBERON:0001004,2.31e-09,42;UBERON:0000065,5.85e-09,41;UBERON:0000490,1.02e-08,66;UBERON:0002193,6.77e-08,48;UBERON:0002405,6.77e-08,48;UBERON:0004177,1.37e-07,29;UBERON:0005057,1.37e-07,29;UBERON:0000077,1.91e-07,35;UBERON:0002390,3.15e-07,45;UBERON:0003061,3.15e-07,45;UBERON:0003408,3.44e-07,24;UBERON:0002530,4.31e-07,65;UBERON:0001048,7.80e-07,134;UBERON:0002370,8.77e-07,23;UBERON:0000974,8.77e-07,23;UBERON:0004807,8.77e-07,23;UBERON:0005058,8.77e-07,23;UBERON:0003351,8.77e-07,23;UBERON:0009113,8.77e-07,23;UBERON:0003295,8.77e-07,23;UBERON:0009722,8.77e-07,23;UBERON:0005562,8.77e-07,23;UBERON:0007690,8.77e-07,23|phase1_expression=3.68342348341026,4.88565570695105,5.45999087267443,8.77146212789807,8.5152274090879,5.87577451691614,5.13947809310157,15.4947988129892,14.2196609373183,17.3207749478275,3.5955773327356,4.30769658574817,15.0656642339461,15.7356724354195,6.99530499812892,7.08663435864391,9.79386629379405,11.5143690355757,11.5176124228821,10.6097412949508,3.656861476496,4.76596565764249,5.22399578277871,3.83981814704176,5.27641346454491,5.7423196411502,3.87685796543167,5.38678081714723,3.99049180858385,5.54466285471848,2.21730510655305,3.17515336729816,3.07532393792285,0,2.02196133825892,2.49351968037739,3.26670970019791,17.996860121687,7.0320181007142,8.37637990358077,16.4704816648684,21.1744100337118,14.0798002379035,1.51076181570693,1.4192770370732,1.83546752161682,1.56478268869608,0.872100625521786,0.659058548203415,1.36100929351998,1.1198913730029,1.43752564364972,11.7447824240415,23.9369506863744,18.4851589528355,2.57259436035947,3.15186783932632,3.09403255366465,1.21389876515759,2.64495489636016,3.1691570175309,1.35537812827653,0,2.6996991518442,3.9554654502679,2.1314403448383,0.898800331555214,1.53687322128622,2.28117147078651,1.35005938331691,0.841299845405528,1.14260393761521,1.76694832761291,1.34739879136449,1.24599112323707,0,1.10115880999389,1.91531007127782,1.68967186581868,1.71452174049252,1.64677758484337,1.04182674111352,0.558365998002762,2.8138130501584,2.44477196442896,2.35702868378934,2.84743361598206,1.1183966749518,2.34751199332871,2.26714680320357,14.4932244350839,0,4.0798280022465,8.63525106620507,4.54843492213368,5.37632264516803,3.93244376368905,1.87473354835864,1.29893002301434,1.7666978725517,2.81686839553361,3.84979432242953,5.09610479413291,0,4.11332977921307,1.77351905832569,3.53867111510348,4.33898742932428,10.0985774622397,3.56261133755579,2.77576522825817,2.13125834818499,1.84492397804847,3.3158980921577,3.64524992120685,3.64433114856059,4.94389935468748,7.37456720291549,6.19227386364912,3.07357014900077,5.30019644304944,4.363877278217,5.59175283654366,2.34224637609238,3.35114730901528,7.91916871146633,8.62668896442626,5.99902730993408,4.70159840170339,1.64769703345305,0.915001205637253,1.50785222535437,2.43354048269187,1.27857728665165,1.0389402227978,0.973447578406546,2.44414473240759,4.35424397135326,2.27450482590307,5.89237196482127,2.86264974517948,1.37941262660084,3.60124259610698,2.26057226753573,3.12967896096108,2.17793324484245,2.71735001223214,3.62184719034622,2.15567992932842,3.59301552318857,6.15828934573821,2.41115305670332,4.17070873838397,3.48252166522167,2.46938563689532,2.38841120182192,2.1066395619397,4.1175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| ||
|EntrezGene=19877 | |||
|HGNC= | |||
|MCL_coexpression_id=317 | |||
|UniProt=P70335,Q3UE22 | |||
|association_with_transcript=-336bp_to_ENSMUST00000067947,NM_009071,uc008eaq.1,uc008ear.1_5end | |||
|description=CAGE_peak_5_at_Rock1_5end | |||
|id=chr18:10182126..10182149,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.45e-14!128;UBERON:0001555!4.45e-14!128;UBERON:0007026!4.45e-14!128;UBERON:0004921!9.57e-14!126;UBERON:0004185!9.57e-14!126;UBERON:0005911!1.10e-13!69;UBERON:0004119!1.82e-13!130;UBERON:0000925!1.82e-13!130;UBERON:0006595!1.82e-13!130;UBERON:0001041!6.39e-13!92;UBERON:0000077!1.15e-12!97;UBERON:0002405!9.31e-11!70;UBERON:0003929!3.83e-10!55;UBERON:0005057!4.93e-10!51;UBERON:0003104!1.67e-09!131;UBERON:0009142!1.67e-09!131;UBERON:0000926!1.83e-09!193;UBERON:0004120!1.83e-09!193;UBERON:0006603!1.83e-09!193;UBERON:0001004!2.45e-09!42;UBERON:0000065!6.20e-09!41;UBERON:0000490!1.12e-08!66;UBERON:0001048!6.29e-08!147;UBERON:0002193!6.93e-08!48;UBERON:0004177!1.46e-07!29;UBERON:0002390!3.22e-07!45;UBERON:0003061!3.22e-07!45;UBERON:0003408!3.66e-07!24;UBERON:0002530!4.77e-07!65;UBERON:0002370!9.34e-07!23;UBERON:0000974!9.34e-07!23;UBERON:0004807!9.34e-07!23;UBERON:0005058!9.34e-07!23;UBERON:0003351!9.34e-07!23;UBERON:0009113!9.34e-07!23;UBERON:0003295!9.34e-07!23;UBERON:0009722!9.34e-07!23;UBERON:0005562!9.34e-07!23;UBERON:0007690!9.34e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,9.78e-14,69;UBERON:0001007,2.58e-13,116;UBERON:0001555,2.58e-13,116;UBERON:0007026,2.58e-13,116;UBERON:0004921,5.32e-13,114;UBERON:0004119,1.08e-12,118;UBERON:0000925,1.08e-12,118;UBERON:0006595,1.08e-12,118;UBERON:0001041,1.63e-12,80;UBERON:0003929,3.43e-10,55;UBERON:0001004,2.31e-09,42;UBERON:0000065,5.85e-09,41;UBERON:0000490,1.02e-08,66;UBERON:0002193,6.77e-08,48;UBERON:0002405,6.77e-08,48;UBERON:0004177,1.37e-07,29;UBERON:0005057,1.37e-07,29;UBERON:0000077,1.91e-07,35;UBERON:0002390,3.15e-07,45;UBERON:0003061,3.15e-07,45;UBERON:0003408,3.44e-07,24;UBERON:0002530,4.31e-07,65;UBERON:0001048,7.80e-07,134;UBERON:0002370,8.77e-07,23;UBERON:0000974,8.77e-07,23;UBERON:0004807,8.77e-07,23;UBERON:0005058,8.77e-07,23;UBERON:0003351,8.77e-07,23;UBERON:0009113,8.77e-07,23;UBERON:0003295,8.77e-07,23;UBERON:0009722,8.77e-07,23;UBERON:0005562,8.77e-07,23;UBERON:0007690,8.77e-07,23 | |||
|phase1_expression=3.68342348341026,4.88565570695105,5.45999087267443,8.77146212789807,8.5152274090879,5.87577451691614,5.13947809310157,15.4947988129892,14.2196609373183,17.3207749478275,3.5955773327356,4.30769658574817,15.0656642339461,15.7356724354195,6.99530499812892,7.08663435864391,9.79386629379405,11.5143690355757,11.5176124228821,10.6097412949508,3.656861476496,4.76596565764249,5.22399578277871,3.83981814704176,5.27641346454491,5.7423196411502,3.87685796543167,5.38678081714723,3.99049180858385,5.54466285471848,2.21730510655305,3.17515336729816,3.07532393792285,0,2.02196133825892,2.49351968037739,3.26670970019791,17.996860121687,7.0320181007142,8.37637990358077,16.4704816648684,21.1744100337118,14.0798002379035,1.51076181570693,1.4192770370732,1.83546752161682,1.56478268869608,0.872100625521786,0.659058548203415,1.36100929351998,1.1198913730029,1.43752564364972,11.7447824240415,23.9369506863744,18.4851589528355,2.57259436035947,3.15186783932632,3.09403255366465,1.21389876515759,2.64495489636016,3.1691570175309,1.35537812827653,0,2.6996991518442,3.9554654502679,2.1314403448383,0.898800331555214,1.53687322128622,2.28117147078651,1.35005938331691,0.841299845405528,1.14260393761521,1.76694832761291,1.34739879136449,1.24599112323707,0,1.10115880999389,1.91531007127782,1.68967186581868,1.71452174049252,1.64677758484337,1.04182674111352,0.558365998002762,2.8138130501584,2.44477196442896,2.35702868378934,2.84743361598206,1.1183966749518,2.34751199332871,2.26714680320357,14.4932244350839,0,4.0798280022465,8.63525106620507,4.54843492213368,5.37632264516803,3.93244376368905,1.87473354835864,1.29893002301434,1.7666978725517,2.81686839553361,3.84979432242953,5.09610479413291,0,4.11332977921307,1.77351905832569,3.53867111510348,4.33898742932428,10.0985774622397,3.56261133755579,2.77576522825817,2.13125834818499,1.84492397804847,3.3158980921577,3.64524992120685,3.64433114856059,4.94389935468748,7.37456720291549,6.19227386364912,3.07357014900077,5.30019644304944,4.363877278217,5.59175283654366,2.34224637609238,3.35114730901528,7.91916871146633,8.62668896442626,5.99902730993408,4.70159840170339,1.64769703345305,0.915001205637253,1.50785222535437,2.43354048269187,1.27857728665165,1.0389402227978,0.973447578406546,2.44414473240759,4.35424397135326,2.27450482590307,5.89237196482127,2.86264974517948,1.37941262660084,3.60124259610698,2.26057226753573,3.12967896096108,2.17793324484245,2.71735001223214,3.62184719034622,2.15567992932842,3.59301552318857,6.15828934573821,2.41115305670332,4.17070873838397,3.48252166522167,2.46938563689532,2.38841120182192,2.1066395619397,4.11756651383544,3.12579849335152,3.93538967817454,4.22146907965973,4.14142741360334,4.7348947117042,3.14822770795846,3.5481435964097,3.72054311600653,5.633741429392,3.38619492864792,2.96207729844265,5.74586124276833,5.75588547775576,5.4093995347373,5.48875288227627,3.89198614405078,2.94405927989778,1.3377599609307,5.94753809370836,4.7601101999438,1.70630600428187,2.55460339046482,4.12375876230699,3.02525286935014,2.66853652613844,2.47293313946327,1.42358718463353,3.78807595865225,3.77002813200404,3.38226002469956,3.70431765526328,4.49409704327111,4.32276099749388,3.38540164532424,0.948339504765408,2.28497025219458,2.25415471346161,3.86937522906097,2.13347735884388,3.08597607517402,2.97211724484009,2.95220295959204,2.98297582898612,3.57851775373222,5.63259991465583,3.00321190288969,4.12773889737726,3.37293168577281,4.46292267054706,3.37648023653384,4.58326533206556,8.91858026097513,4.86405680325106,3.0201755450689,12.9391385874619,7.07067800570156,4.99260276983297,5.80931419278357,4.4849353380478,6.75420929908714,8.86815312799702,2.27389694124582,3.25929952884052,3.73439188705414,4.69380496577004,6.53274404023081,8.33152743101048,9.56154874503214,8.35466263762812,7.0868700687608,7.01600982092943,7.70157579163969,6.38934432903814,5.78596234326046,6.03165135757089,3.26343410291226,4.91764273019036,4.13905119457099,1.9266070798535,1.75817529888305,1.14754461763673,1.00988370881749,1.89304931649754,2.73307121007647,2.80050417052639,1.43381278771531,3.7875774594007,4.81230102341015,2.83367491172426,3.50707029493574,4.34816555741176,4.4984984299053,2.98074178937364,0.712262414669021,2.28041743095006,4.45419332025846,6.63725691699814,4.12727081463468,2.11626489875326,4.52652191414155,2.95301892880773,7.37844355065426,3.10113951801865,4.36240475373007,3.92147116223193,4.42451461110142,3.16255825724996,5.15677716240934,5.7874732978144,2.52085531643834,0.258717367565509,1.07168517515796,4.43350584105684,3.38900753443934,4.44282355625727,1.522324745573,2.58138878870081,2.33015277950202,7.05690873775878,5.11147384118588,3.87514624070173,3.5584625707612,2.74556391207214,3.61109979439135,3.20628920292836,2.03967832211561,5.46786818553129,3.30218988741156,3.70389054739423,5.83942216714542,8.20165366326151,5.0331198105435,9.00885678967433,9.51669875800874,8.98299829728755,3.81868247206045,3.16335993581135,3.45643094115643,3.13215488383224,5.01811910434725,3.27543845619266,2.9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| |||
|short_description=p5@Rock1 | |||
}} |
Revision as of 15:40, 13 September 2013
Short description: | p5@Rock1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rock1_5end |
Coexpression cluster: | MCL_coexpression_mm9:317 |
Association with transcript: | -336bp_to_ENSMUST00000067947, NM_009071, uc008eaq.1, uc008ear.1_5end |
EntrezGene: | Rock1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 9.78e-14 | 69 |
digestive system | 2.58e-13 | 116 |
digestive tract | 2.58e-13 | 116 |
primitive gut | 2.58e-13 | 116 |
subdivision of digestive tract | 5.32e-13 | 114 |
endoderm-derived structure | 1.08e-12 | 118 |
endoderm | 1.08e-12 | 118 |
presumptive endoderm | 1.08e-12 | 118 |
foregut | 1.63e-12 | 80 |
gut epithelium | 3.43e-10 | 55 |
respiratory system | 2.31e-09 | 42 |
respiratory tract | 5.85e-09 | 41 |
unilaminar epithelium | 1.02e-08 | 66 |
hemolymphoid system | 6.77e-08 | 48 |
immune system | 6.77e-08 | 48 |
hemopoietic organ | 1.37e-07 | 29 |
immune organ | 1.37e-07 | 29 |
mixed endoderm/mesoderm-derived structure | 1.91e-07 | 35 |
hematopoietic system | 3.15e-07 | 45 |
blood island | 3.15e-07 | 45 |
gland of gut | 3.44e-07 | 24 |
gland | 4.31e-07 | 65 |
primordium | 7.80e-07 | 134 |
thymus | 8.77e-07 | 23 |
neck | 8.77e-07 | 23 |
respiratory system epithelium | 8.77e-07 | 23 |
hemolymphoid system gland | 8.77e-07 | 23 |
pharyngeal epithelium | 8.77e-07 | 23 |
thymic region | 8.77e-07 | 23 |
pharyngeal gland | 8.77e-07 | 23 |
entire pharyngeal arch endoderm | 8.77e-07 | 23 |
thymus primordium | 8.77e-07 | 23 |
early pharyngeal endoderm | 8.77e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.