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FFCP PHASE1:Mm9::chr16:58670375..58670475,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12892|HGNC=|MCL_coexpression_id=15|UniProt=P36552,Q3U029|association_with_transcript=54bp_to_ENSMUST00000060077,NM_007757,uc007znz.2,uc007zoa.2_5end|description=CAGE_peak_1_at_Cpox_5end|id=chr16:58670375..58670475,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.03e-12!49;UBERON:0005173!1.03e-12!49;UBERON:0002417!1.03e-12!49;UBERON:0000916!1.03e-12!49;UBERON:0002107!2.21e-12!22;UBERON:0007499!2.21e-12!22;UBERON:0006925!2.21e-12!22;UBERON:0009497!2.21e-12!22;UBERON:0000015!2.21e-12!22;UBERON:0002423!2.21e-12!22;UBERON:0006235!2.21e-12!22;UBERON:0008835!2.21e-12!22;UBERON:0003894!2.21e-12!22;UBERON:0004161!2.21e-12!22;UBERON:0008836!2.21e-12!22;UBERON:0009854!2.66e-12!23;UBERON:0009856!2.66e-12!23;UBERON:0002365!3.59e-12!25;UBERON:0002330!3.59e-12!25;UBERON:0005409!7.30e-11!59;UBERON:0004119!3.46e-08!130;UBERON:0000925!3.46e-08!130;UBERON:0006595!3.46e-08!130;UBERON:0001007!4.04e-08!128;UBERON:0001555!4.04e-08!128;UBERON:0007026!4.04e-08!128;UBERON:0004921!4.96e-08!126;UBERON:0004185!4.96e-08!126;UBERON:0005177!5.21e-08!85;UBERON:0003914!9.45e-08!47;UBERON:0009569!1.93e-07!66;UBERON:0000160!5.22e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.03e-12,49;UBERON:0005173,1.03e-12,49;UBERON:0002417,1.03e-12,49;UBERON:0000916,1.03e-12,49;UBERON:0002107,2.21e-12,22;UBERON:0007499,2.21e-12,22;UBERON:0006925,2.21e-12,22;UBERON:0009497,2.21e-12,22;UBERON:0000015,2.21e-12,22;UBERON:0002423,2.21e-12,22;UBERON:0006235,2.21e-12,22;UBERON:0008835,2.21e-12,22;UBERON:0003894,2.21e-12,22;UBERON:0004161,2.21e-12,22;UBERON:0008836,2.21e-12,22;UBERON:0009854,2.66e-12,23;UBERON:0009856,2.66e-12,23;UBERON:0002365,3.59e-12,25;UBERON:0002330,3.59e-12,25;UBERON:0005177,1.26e-09,79;UBERON:0005409,2.02e-08,47;UBERON:0002100,3.97e-08,90;UBERON:0003914,9.45e-08,47;UBERON:0003104,1.14e-07,61;UBERON:0009142,1.14e-07,61;UBERON:0009569,1.93e-07,66;UBERON:0005256,5.30e-07,45|phase1_expression=15.8547358633746,49.5545078847893,53.2349110085757,127.337432960175,104.687207558787,48.1813510387124,53.9645199775664,24.4043081304579,15.0643932702283,16.8526458951835,19.8612843141586,22.6552931546755,14.2096605842901,18.0960233007325,649.897145302358,924.299595634555,1210.24204916169,27.2874773034876,24.9548269162445,53.4730961265518,22.4514285998824,16.6808798017487,16.194386926614,46.3978026100879,34.8702107222098,37.8993096315913,39.6301036466349,37.9229369527165,37.2445902134493,32.2598566092711,31.4857325130533,144.786993548796,158.686715196819,158.481681015439,36.3953040886606,40.7274881128306,36.5463147709641,27.6230876286359,11.720030167857,14.1351410872926,6.47054636834116,10.2456822743767,5.82612423637384,55.7722903631807,51.3981041282939,29.7345738501924,24.2541316747892,19.8402892306206,15.1583466086786,14.1933826324227,24.9175830493145,33.0630898039435,15.939347575485,9.42970784614748,11.7632829699862,24.439646423415,25.7880095944881,18.5641953219879,9.5088736604011,8.46385566835253,13.3104594736298,17.958760199664,24.0109594950008,24.2972923665978,33.6214563272771,34.8135256323589,17.0772062995491,17.6740420447915,7.56934169851887,9.04539786822327,6.94072372459561,28.5650984403804,27.1668305370485,7.34944795289724,7.47594673942244,8.27296907949019,29.731287869835,32.5602712117229,37.4799941145234,8.96826756565318,8.69132614222892,4.68822033501084,36.2937898701795,26.449842671489,29.1844653253707,15.9099436155781,14.0947963991112,10.8111678578674,16.2054053733014,16.92802946392,27.5371264266594,105.832136868711,59.1575060325743,168.387395790999,141.651259003592,192.651561451854,87.7777625823449,22.1559419351475,20.0035223544209,18.3736578745377,13.5209682985613,10.2661181931454,7.64415719119937,0,37.6694411359513,37.7506199557897,21.7375511356357,106.191008138726,16.3130866697718,22.2663208597237,72.3433812614787,82.5101446225903,77.9480380725478,40.3936676681028,31.5137735123689,24.5049853092867,72.1809305784372,23.2804964641058,255.652449513514,106.604354115343,321.545250878333,310.320162006542,50.325775528893,31.034764483224,20.1068838540917,61.5651503052705,11.5022519525683,6.59893004092748,12.9611631614526,36.9982879329912,35.2275464170342,11.5602003943835,36.1554585999935,31.708716708961,34.492815396887,41.2092808192104,16.7016556714519,166.705340617525,27.5467806692705,100.591207113735,9.88915366516548,11.2652031172402,13.5046597354012,35.1142225557216,11.4301318574231,11.7864622662062,10.026084527891,59.2430718992346,19.4011193639558,14.3720620927543,17.067259043903,12.4941567483718,20.019401944243,30.6461906539507,22.8418171412817,13.5343301436575,12.6398373716382,14.6688307055388,18.7547909601091,61.7234802155796,51.8302592558223,22.5077576826269,29.1196024769809,35.0240332510379,35.7899701898718,34.8800917125612,41.3141038155414,27.4398554562848,27.1523752357243,29.8784784623953,47.2631159652339,51.462395573717,50.7160766322327,52.0720904790242,38.2727706386712,10.702079687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|EntrezGene=12892
|HGNC=
|MCL_coexpression_id=15
|UniProt=P36552,Q3U029
|association_with_transcript=54bp_to_ENSMUST00000060077,NM_007757,uc007znz.2,uc007zoa.2_5end
|description=CAGE_peak_1_at_Cpox_5end
|id=chr16:58670375..58670475,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005172!1.03e-12!49;UBERON:0005173!1.03e-12!49;UBERON:0002417!1.03e-12!49;UBERON:0000916!1.03e-12!49;UBERON:0002107!2.21e-12!22;UBERON:0007499!2.21e-12!22;UBERON:0006925!2.21e-12!22;UBERON:0009497!2.21e-12!22;UBERON:0000015!2.21e-12!22;UBERON:0002423!2.21e-12!22;UBERON:0006235!2.21e-12!22;UBERON:0008835!2.21e-12!22;UBERON:0003894!2.21e-12!22;UBERON:0004161!2.21e-12!22;UBERON:0008836!2.21e-12!22;UBERON:0009854!2.66e-12!23;UBERON:0009856!2.66e-12!23;UBERON:0002365!3.59e-12!25;UBERON:0002330!3.59e-12!25;UBERON:0005409!7.30e-11!59;UBERON:0004119!3.46e-08!130;UBERON:0000925!3.46e-08!130;UBERON:0006595!3.46e-08!130;UBERON:0001007!4.04e-08!128;UBERON:0001555!4.04e-08!128;UBERON:0007026!4.04e-08!128;UBERON:0004921!4.96e-08!126;UBERON:0004185!4.96e-08!126;UBERON:0005177!5.21e-08!85;UBERON:0003914!9.45e-08!47;UBERON:0009569!1.93e-07!66;UBERON:0000160!5.22e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.03e-12,49;UBERON:0005173,1.03e-12,49;UBERON:0002417,1.03e-12,49;UBERON:0000916,1.03e-12,49;UBERON:0002107,2.21e-12,22;UBERON:0007499,2.21e-12,22;UBERON:0006925,2.21e-12,22;UBERON:0009497,2.21e-12,22;UBERON:0000015,2.21e-12,22;UBERON:0002423,2.21e-12,22;UBERON:0006235,2.21e-12,22;UBERON:0008835,2.21e-12,22;UBERON:0003894,2.21e-12,22;UBERON:0004161,2.21e-12,22;UBERON:0008836,2.21e-12,22;UBERON:0009854,2.66e-12,23;UBERON:0009856,2.66e-12,23;UBERON:0002365,3.59e-12,25;UBERON:0002330,3.59e-12,25;UBERON:0005177,1.26e-09,79;UBERON:0005409,2.02e-08,47;UBERON:0002100,3.97e-08,90;UBERON:0003914,9.45e-08,47;UBERON:0003104,1.14e-07,61;UBERON:0009142,1.14e-07,61;UBERON:0009569,1.93e-07,66;UBERON:0005256,5.30e-07,45
|phase1_expression=15.8547358633746,49.5545078847893,53.2349110085757,127.337432960175,104.687207558787,48.1813510387124,53.9645199775664,24.4043081304579,15.0643932702283,16.8526458951835,19.8612843141586,22.6552931546755,14.2096605842901,18.0960233007325,649.897145302358,924.299595634555,1210.24204916169,27.2874773034876,24.9548269162445,53.4730961265518,22.4514285998824,16.6808798017487,16.194386926614,46.3978026100879,34.8702107222098,37.8993096315913,39.6301036466349,37.9229369527165,37.2445902134493,32.2598566092711,31.4857325130533,144.786993548796,158.686715196819,158.481681015439,36.3953040886606,40.7274881128306,36.5463147709641,27.6230876286359,11.720030167857,14.1351410872926,6.47054636834116,10.2456822743767,5.82612423637384,55.7722903631807,51.3981041282939,29.7345738501924,24.2541316747892,19.8402892306206,15.1583466086786,14.1933826324227,24.9175830493145,33.0630898039435,15.939347575485,9.42970784614748,11.7632829699862,24.439646423415,25.7880095944881,18.5641953219879,9.5088736604011,8.46385566835253,13.3104594736298,17.958760199664,24.0109594950008,24.2972923665978,33.6214563272771,34.8135256323589,17.0772062995491,17.6740420447915,7.56934169851887,9.04539786822327,6.94072372459561,28.5650984403804,27.1668305370485,7.34944795289724,7.47594673942244,8.27296907949019,29.731287869835,32.5602712117229,37.4799941145234,8.96826756565318,8.69132614222892,4.68822033501084,36.2937898701795,26.449842671489,29.1844653253707,15.9099436155781,14.0947963991112,10.8111678578674,16.2054053733014,16.92802946392,27.5371264266594,105.832136868711,59.1575060325743,168.387395790999,141.651259003592,192.651561451854,87.7777625823449,22.1559419351475,20.0035223544209,18.3736578745377,13.5209682985613,10.2661181931454,7.64415719119937,0,37.6694411359513,37.7506199557897,21.7375511356357,106.191008138726,16.3130866697718,22.2663208597237,72.3433812614787,82.5101446225903,77.9480380725478,40.3936676681028,31.5137735123689,24.5049853092867,72.1809305784372,23.2804964641058,255.652449513514,106.604354115343,321.545250878333,310.320162006542,50.325775528893,31.034764483224,20.1068838540917,61.5651503052705,11.5022519525683,6.59893004092748,12.9611631614526,36.9982879329912,35.2275464170342,11.5602003943835,36.1554585999935,31.708716708961,34.492815396887,41.2092808192104,16.7016556714519,166.705340617525,27.5467806692705,100.591207113735,9.88915366516548,11.2652031172402,13.5046597354012,35.1142225557216,11.4301318574231,11.7864622662062,10.026084527891,59.2430718992346,19.4011193639558,14.3720620927543,17.067259043903,12.4941567483718,20.019401944243,30.6461906539507,22.8418171412817,13.5343301436575,12.6398373716382,14.6688307055388,18.7547909601091,61.7234802155796,51.8302592558223,22.5077576826269,29.1196024769809,35.0240332510379,35.7899701898718,34.8800917125612,41.3141038155414,27.4398554562848,27.1523752357243,29.8784784623953,47.2631159652339,51.462395573717,50.7160766322327,52.0720904790242,38.2727706386712,10.7020796874456,89.2130714056255,101.020116465474,23.2484193083405,37.8545775132515,51.1603821448711,101.446812885541,111.85615605397,141.527865827744,61.6887780007865,112.489386076499,53.5343994744574,60.4827675005099,47.3762731699462,72.8043721009919,42.7953338751895,59.9415232495645,20.4841333029328,42.2719496655997,31.5581659884625,28.1038832426534,35.4933051516755,39.6968740579203,62.4776986787662,58.6012287479021,57.9325305734673,61.2049933052131,170.460260575111,764.984809708291,813.361121778434,908.442934034809,1196.06327570661,1207.8152160401,1015.95714860786,691.333818294298,248.715437872904,368.461416498405,303.350915772718,236.3095017695,172.244795559237,193.980578263382,191.775835054924,169.820119519905,26.7892125741577,30.6976087068185,24.1188165134198,15.6165478913173,19.0099101113687,22.6133447546451,25.9467568565755,29.074913530812,21.9112850307605,17.4957104822532,20.0913008508434,26.7097202986653,22.2763626607005,19.8169210256671,9.04747703635634,11.9659250440116,53.1105414860559,51.0482980663755,43.6697604766794,44.6576525916294,21.8033477350978,42.4151157703347,10.7272794601527,12.1036010731958,9.69405289797595,10.9925647058174,11.1399337041197,15.0030561318081,17.0020494703456,22.7959569170823,13.0444966722353,18.9579576688866,30.5171183197778,33.476333489444,22.6412873501471,23.5907275850726,76.9921802371784,38.602121148642,51.0926811270429,93.5481195589255,105.127473865555,78.3959627257015,76.2363464846252,51.6217895858058,48.8401408387068,74.2686381149168,96.9851198889989,90.7592780584044,24.8520912200265,12.0640933000978,16.5579115241926,15.2179294872431,16.847322196016,16.9450376721967,21.0622746370715,15.5277124048446,35.4354279176203,40.8835896767173,41.9003956304428,45.1788333059655,28.2562746717835,31.6039726623537,37.0054266409723,47.1084382268326,53.6324739398925,43.7603712744803,614.793429110674,110.210587492361,410.020683596542,779.091938171402,835.065037147743,673.06538557359,10.3686842296252,12.3157278044819,10.6413979829406,98.3310736555567,26.2558874672342,49.6099499789511,45.7942645084437,50.8084559315159,69.4392952712845,68.9156810026434,76.5371000016611,73.5534196975123,30.5891336968631,43.4937519160848,5.07323644815771,23.0255480907727,27.9624848872495,19.2506676460607,20.7947315799147,18.9230860549672,16.6647278876971,23.566993656755,24.0127898734878,15.2197996120384,13.2493802878618,24.6488674089979,23.1106745430787,23.5208091907454,21.4369357913362,26.8540043501222,23.4443998641893,17.3081447308755,21.1196023859645,16.9623635912888,20.194803763575,17.4429300286734,19.5890340286902,19.6272156946272,15.4277510879671,62.3508554941831,22.8645531975287,16.5073496161435,17.7957693345923,26.2737847883779,33.4074806303104,32.4178374953059,44.3742544693666,36.1131914905462,36.7088697701093,21.1749608793301,29.2176711854092,23.3720327987415,27.4033007908257,33.2373314851468,30.3760125104313,33.7740902418165,43.5016712624836,39.3497836931383,18.2665731748151,97.3620691098516,113.537847826499,185.24731840604,245.876239762623,131.08042152486,106.01168916137,96.8364769022803,116.814592291421,97.0357293172982,119.135270948413,103.178608738184,79.0334323045808,89.8272888240316,88.5654931295557,90.9720950350671,101.630553853638,91.4389704997962,105.081904704843,101.714453812869,112.461114782416,91.5775159782181,84.4064112413516,105.812191308335,104.743740402263,100.522154175312,107.56164804919,84.4453773715476,97.7789619690205,122.329015221387,107.72059645675,106.680354412735,84.301594892956,98.3848941530884,95.6816790466461,22.982573170291,73.2205934434128,68.3289951873589,21.998158187917,72.7951683094401,79.762535453425
|short_description=p1@Cpox
}}

Revision as of 12:58, 13 September 2013

Short description:p1@Cpox
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cpox_5end
Coexpression cluster:MCL_coexpression_mm9:15
Association with transcript: 54bp_to_ENSMUST00000060077, NM_007757, uc007znz.2, uc007zoa.2_5end
EntrezGene:Cpox
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cpox

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I549.55
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I653.23
CD326+ enterocyte, pool1.CNhs13542.11848-124I3127.34
CD326+ enterocyte, pool2.CNhs13197.11849-124I4104.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I748.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I853.96
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E924.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.06
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E619.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F122.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.21
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1649.90
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3924.30
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51210.24
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A227.29
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.95
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A653.47
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D146.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D234.87
GP2+ M cell, pool1.CNhs13228.11845-124H937.90
GP2+ M cell, pool2.CNhs13231.11846-124I139.63
GP2+ M cell, pool3.CNhs13240.11847-124I237.92
Ileum epithelium, pool1.CNhs13199.10252-104B937.24
Ileum epithelium, pool2.CNhs13232.10253-104C132.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C831.49
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3144.79
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6158.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9158.48
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F536.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F640.73
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F736.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G827.62
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H111.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G96.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D855.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D951.40
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B329.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B724.25
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C219.84
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.16
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C433.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.94
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C124.44
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E125.79
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C518.56
Mouse Granule cells, donor1.CNhs12131.11713-123C39.51
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.96
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C724.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E733.62
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D234.81
Mouse Microglia, donor1.CNhs12629.11718-123C817.08
Mouse Microglia, donor2.CNhs12634.11736-123E817.67
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F128.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D527.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F332.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D737.48
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.69
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E436.29
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E526.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.81
Mouse Schwann, donor1.CNhs12507.11728-123D916.21
Mouse Schwann, donor2.CNhs12573.11746-123F916.93
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G327.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7105.83
Mouse hepatocyte, donor1.CNhs13078.11714-123C459.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C8168.39
Mouse hepatocyte, donor6.CNhs13090.11822-124F4141.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F6192.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A787.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I722.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E320.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I818.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G137.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G237.75
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G321.74
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6106.19
accessory axillary lymph node, adult.CNhs10475.1063-29H916.31
adrenal gland, adult.CNhs10508.49-24D722.27
adrenal gland, embryo E14.CNhs11038.406-44C572.34
adrenal gland, embryo E16.CNhs11004.1254-43D682.51
adrenal gland, embryo E17.CNhs11043.1263-45I177.95
adrenal gland, embryo E18.CNhs11026.1262-18F540.39
adrenal gland, neonate N00.CNhs11191.1311-23C131.51
adrenal gland, neonate N25.CNhs11223.1377-27I324.50
amnion, adult pregnant day17.5.CNhs10488.583-22A872.18
aorta, adult.CNhs10498.46-23H123.28
bone (os femoris), adult.CNhs10483.56-12G2255.65
bone (os femoris), neonate N02.CNhs11227.1985-43F5106.60
bone (os femoris), neonate N16.CNhs11225.1525-43A6321.55
bone (os femoris), neonate N20.CNhs11195.1350-25C3310.32
cecum, adult.CNhs10467.37-13H450.33
cerebellum, adult.CNhs10494.15-8B231.03
cerebellum, neonate N30.CNhs11135.1395-42I220.11
colon, adult.CNhs10468.36-18H761.57
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.50
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.96
corpora quadrigemina, adult.CNhs10501.16-22A437.00
corpus striatum, adult.CNhs10487.19-21D835.23
corpus striatum, neonate N00.CNhs11226.630-43F111.56
cortex, adult.CNhs10473.12-14D536.16
cortex, neonate N30.CNhs11107.1392-42F231.71
diencephalon, adult.CNhs10482.20-12F234.49
diencephalon, neonate N30.CNhs11201.1388-42B241.21
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2166.71
epididymis, adult.CNhs10490.58-23B227.55
eyeball, adult.CNhs10484.31-12G4100.59
eyeball, embryo E12.CNhs11016.345-16C69.89
eyeball, embryo E14.CNhs10521.399-16E211.27
eyeball, embryo E15.CNhs10593.426-16C913.50
eyeball, embryo E17.CNhs11023.1261-18D435.11
eyeball, neonate N00.CNhs11207.633-15C611.43
eyeball, neonate N01.CNhs11140.1532-43E711.79
eyeball, neonate N02.CNhs11205.1551-44G810.03
eyeball, neonate N16.CNhs11188.777-19A259.24
forelimb, embryo E11.CNhs10596.335-25E219.40
forelimb, embryo E12.CNhs10600.359-14H214.37
forelimb, embryo E13.CNhs10589.384-1E217.07
forelimb, embryo E14.CNhs10577.413-26A812.49
forelimb, embryo E15.CNhs11007.437-20E720.02
forelimb, embryo E17.CNhs10598.1517-43C430.65
forelimb, embryo E18.CNhs11008.1520-43B522.84
gonad, embryo E13.CNhs11044.1564-45I613.53
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C812.64
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.67
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D518.75
heart, embryo E11.CNhs10586.331-24E961.72
heart, embryo E12.CNhs11015.353-12F551.83
heart, embryo E13.CNhs11013.376-3I922.51
heart, embryo E14.CNhs10597.403-26D429.12
heart, embryo E15.CNhs11017.431-16C835.02
heart, embryo E16.CNhs11021.457-17C635.79
heart, embryo E17.CNhs11025.479-18E534.88
heart, embryo E18.CNhs11030.1283-20G341.31
heart, neonate N00.CNhs11213.639-21E327.44
heart, neonate N03.CNhs11221.1349-25I227.15
heart, neonate N10.CNhs11118.749-24G129.88
heart, neonate N16.CNhs11209.782-15G147.26
heart, neonate N20.CNhs11127.821-26I651.46
heart, neonate N25.CNhs11196.1351-25D350.72
heart, neonate N30.CNhs11202.1390-42D252.07
hippocampus, adult.CNhs10478.13-16E838.27
hippocampus, neonate N00.CNhs11228.627-43G110.70
intestinal mucosa, adult.CNhs10506.860-29I389.21
intestine, adult.CNhs10496.178-9A3101.02
intestine, embryo E12.CNhs11019.1251-16I523.25
intestine, embryo E13.CNhs11010.381-16D537.85
intestine, embryo E15.CNhs10602.976-16D851.16
intestine, embryo E16.CNhs10585.463-22H4101.45
intestine, embryo E17.CNhs10582.482-18D3111.86
intestine, embryo E18.CNhs10526.1289-20F7141.53
intestine, neonate N00.CNhs11126.644-26D161.69
intestine, neonate N01.CNhs11192.1322-23E9112.49
intestine, neonate N06.CNhs11102.688-20B853.53
intestine, neonate N07.CNhs11095.720-20F260.48
intestine, neonate N10.CNhs11098.755-23A547.38
intestine, neonate N20.CNhs11187.827-18D172.80
intestine, neonate N25.CNhs11121.1352-25E342.80
intestine, neonate N30.CNhs11131.1384-42G159.94
kidney, embryo E14.CNhs10606.411-4I920.48
kidney, embryo E15.CNhs10997.434-16F842.27
kidney, embryo E16.CNhs10584.464-22A531.56
kidney, embryo E17.CNhs11028.483-18I228.10
kidney, embryo E18.CNhs11001.1288-20C735.49
kidney, neonate N00.CNhs11214.646-21G739.70
kidney, neonate N10.CNhs11206.758-6D562.48
kidney, neonate N20.CNhs11113.832-19I158.60
kidney, neonate N25.CNhs11122.1353-25F357.93
kidney, neonate N30.CNhs11203.1385-42H161.20
liver, adult pregnant day01.CNhs10466.508-5B2170.46
liver, embryo E12.CNhs10601.355-15F8764.98
liver, embryo E13.CNhs10524.378-3H6813.36
liver, embryo E14.CNhs10594.409-16E1908.44
liver, embryo E15.CNhs10520.433-16D71196.06
liver, embryo E16.CNhs10523.462-17F51207.82
liver, embryo E17.CNhs10510.481-18A31015.96
liver, embryo E18.CNhs10579.499-43G4691.33
liver, neonate N00.CNhs11117.641-24F4248.72
liver, neonate N03.CNhs11123.1345-25G2368.46
liver, neonate N06.CNhs11101.684-20A8303.35
liver, neonate N07.CNhs11103.716-20H2236.31
liver, neonate N10.CNhs11115.751-24B9172.24
liver, neonate N20.CNhs11220.823-25A3193.98
liver, neonate N25.CNhs11198.1368-26H1191.78
liver, neonate N30.CNhs11106.1382-42D1169.82
lung, adult.CNhs10474.28-22B126.79
lung, embryo E12.CNhs10522.354-16G230.70
lung, embryo E14.CNhs10604.404-26F824.12
lung, embryo E15.CNhs11020.432-17C515.62
lung, embryo E16.CNhs10998.458-17B619.01
lung, embryo E17.CNhs10605.480-44A622.61
lung, embryo E18.CNhs10583.1287-20I625.95
lung, neonate N00.CNhs11224.640-42C629.07
lung, neonate N06.CNhs11212.683-20E521.91
lung, neonate N07.CNhs11111.715-19A317.50
lung, neonate N10.CNhs11219.750-23E620.09
lung, neonate N20.CNhs11109.822-18A426.71
lung, neonate N25.CNhs11119.1359-25C722.28
lung, neonate N30.CNhs11133.1394-42H219.82
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.97
mammary gland, adult lactating day02.CNhs10480.595-22B653.11
mammary gland, adult pregnant day19.CNhs10476.588-5H251.05
medulla oblongata, adult.CNhs10477.17-12C243.67
medulla oblongata, neonate N30.CNhs11200.1396-42A344.66
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C721.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C242.42
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.10
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.69
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.99
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.14
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.04
olfactory brain, adult.CNhs10489.18-22I918.96
ovary, adult.CNhs10507.91-2I730.52
ovary, embryo E18.CNhs11040.505-44H733.48
ovary, neonate N00.CNhs11217.1299-22I422.64
oviduct, adult pregnant day01.CNhs10500.988-6G623.59
pancreas, adult.CNhs10486.34-16E476.99
pancreas, embryo E14.CNhs11012.405-44F438.60
pancreas, embryo E15.CNhs11042.1556-45F251.09
pancreas, embryo E16.CNhs11003.460-26E593.55
pancreas, embryo E17.CNhs10599.1558-45G3105.13
pancreas, embryo E18.CNhs10580.1535-43I778.40
pancreas, neonate N00.CNhs11105.645-26G976.24
pancreas, neonate N01.CNhs11138.1531-43D751.62
pancreas, neonate N02.CNhs11139.1539-43D848.84
pancreas, neonate N16.CNhs11136.787-43B674.27
pancreas, neonate N25.CNhs11094.1555-45E296.99
pancreas, neonate N30.CNhs11182.1548-44H590.76
pituitary gland, adult.CNhs10493.21-1G824.85
pituitary gland, embryo E12.CNhs11018.346-16E612.06
pituitary gland, embryo E13.CNhs11009.370-44C716.56
pituitary gland, embryo E14.CNhs11037.398-44A515.22
pituitary gland, embryo E15.CNhs10592.427-16B916.85
pituitary gland, embryo E16.CNhs11036.449-43F616.95
pituitary gland, embryo E17.CNhs11039.1265-44F521.06
pituitary gland, neonate N00.CNhs11190.1308-22E915.53
placenta, adult pregnant day10.CNhs10472.539-13I735.44
placenta, adult pregnant day17.CNhs10464.577-18G340.88
prostate, adult.CNhs10470.859-1F841.90
skin, adult.CNhs10492.30-1C345.18
skin, neonate N00.CNhs11124.650-25G428.26
skin, neonate N03.CNhs11215.662-22H331.60
skin, neonate N06.CNhs11097.693-20I537.01
skin, neonate N10.CNhs11108.762-6C447.11
small intestine, neonate N16.CNhs11114.790-21I153.63
spinal cord, adult.CNhs10505.24-13C943.76
spleen, adult.CNhs10465.25-2G2614.79
spleen, embryo E16.CNhs11035.461-43C1110.21
spleen, embryo E18.CNhs11011.1271-21F2410.02
spleen, neonate N10.CNhs11116.752-24D1779.09
spleen, neonate N20.CNhs11112.824-19H1835.07
spleen, neonate N25.CNhs11099.1354-25G3673.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.64
stomach, adult.CNhs10503.33-1H698.33
stomach, embryo E12.CNhs10588.356-43E326.26
stomach, embryo E15.CNhs10603.1252-16G849.61
stomach, embryo E16.CNhs11022.459-17D445.79
stomach, embryo E17.CNhs11006.1035-18D550.81
stomach, embryo E18.CNhs10999.1286-20C669.44
stomach, neonate N03.CNhs11193.1340-24B868.92
stomach, neonate N07.CNhs11210.718-18A976.54
stomach, neonate N25.CNhs11104.1355-25E473.55
stomach, neonate N30.CNhs11134.1386-42I130.59
submandibular gland, adult.CNhs10469.59-29C143.49
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F523.03
testis, embryo E15.CNhs11034.443-27C527.96
testis, embryo E16.CNhs11033.470-26G519.25
testis, embryo E17.CNhs11029.486-18I520.79
testis, embryo E18.CNhs11027.503-18G518.92
testis, neonate N00.CNhs11189.1300-22B716.66
testis, neonate N07.CNhs11222.726-26I423.57
testis, neonate N10.CNhs11204.763-44D924.01
testis, neonate N20.CNhs11110.839-18H315.22
testis, neonate N30.CNhs11130.1391-42E213.25
thymus, adult.CNhs10471.38-12B524.65
thymus, embryo E14.CNhs11041.402-44I423.11
thymus, embryo E15.CNhs11005.430-45I223.52
thymus, embryo E16.CNhs11002.456-26C521.44
thymus, embryo E17.CNhs10581.478-18C126.85
thymus, embryo E18.CNhs10595.1273-19G423.44
thymus, neonate N02.CNhs11181.1541-43F817.31
thymus, neonate N03.CNhs11137.2104-43C721.12
thymus, neonate N06.CNhs11197.681-26C416.96
thymus, neonate N07.CNhs11211.713-19D320.19
thymus, neonate N10.CNhs11194.748-24E417.44
thymus, neonate N20.CNhs11186.820-7A219.59
thymus, neonate N25.CNhs11125.1362-25G719.63
thymus, neonate N30.CNhs11132.1393-42G215.43
tongue, adult.CNhs10499.32-1B462.35
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H322.86
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F716.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.80
urinary bladder, adult.CNhs10481.879-12E426.27
uterus, adult pregnant day19.CNhs10497.590-15F533.41
uterus, adult.CNhs10509.92-27E532.42
vagina, adult.CNhs10502.89-27D544.37
vesicular gland, adult.CNhs10491.51-27F836.11
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A136.71
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.17
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A329.22
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A427.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A630.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A733.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A939.35
whole body, embryo E11.CNhs11014.324-5I818.27
whole body, embryo E12.CNhs10587.857-27C997.36
whole body, embryo E13.CNhs10512.372-23H2113.54
whole body, embryo E14.5.CNhs10578.420-27D2185.25
whole body, embryo E14.CNhs10519.395-14B1245.88
whole body, embryo E16.CNhs10514.453-14F2131.08
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5106.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G596.84
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5116.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G597.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5119.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5103.18
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G579.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G589.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G588.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G590.97
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5101.63
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G591.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5105.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5101.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5112.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G591.58
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G584.41
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5105.81
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5104.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5100.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5107.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G584.45
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G597.78
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5122.33
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5107.72
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5106.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G584.30
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G598.38
whole body, embryo E17.5.CNhs10513.490-9F995.68
whole body, embryo E17.CNhs10517.475-3I522.98
whole body, embryo E18.CNhs10516.493-3B373.22
whole body, neonate N00.CNhs10525.657-19C268.33
whole body, neonate N01.CNhs10576.659-23C622.00
whole body, neonate N06.CNhs10515.692-21D172.80
whole body, neonate N10.CNhs10518.761-6B479.76





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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