Personal tools

FFCP PHASE1:Mm9::chr7:5003069..5003078,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=68992|HGNC=|UniProt=Q9DB38|association_with_transcript=-55bp_to_ENSMUST00000069324,NM_026900,uc009ezp.2_5end|description=CAGE_peak_5_at_Zfp580_5end|id=chr7:5003069..5003078,+|ontology_enrichment_celltype=CL:0000221!2.35e-08!44;CL:0000133!2.35e-08!44;CL:0002319!6.20e-08!43;CL:0000055!6.93e-08!50|ontology_enrichment_celltype_v019_2=CL:0002613,9.79e-09,3;CL:0002453,1.10e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.67e-15!73;UBERON:0005743!4.67e-15!73;UBERON:0000073!6.21e-15!75;UBERON:0001016!6.21e-15!75;UBERON:0004121!3.96e-13!102;UBERON:0000924!3.96e-13!102;UBERON:0006601!3.96e-13!102;UBERON:0001049!1.74e-12!52;UBERON:0005068!1.74e-12!52;UBERON:0006241!1.74e-12!52;UBERON:0007135!1.74e-12!52;UBERON:0002020!4.00e-12!34;UBERON:0002346!1.43e-11!71;UBERON:0003075!1.43e-11!71;UBERON:0007284!1.43e-11!71;UBERON:0002780!2.30e-11!39;UBERON:0001890!2.30e-11!39;UBERON:0006240!2.30e-11!39;UBERON:0000955!3.62e-11!50;UBERON:0006238!3.62e-11!50;UBERON:0003080!3.72e-11!40;UBERON:0002791!7.60e-11!29;UBERON:0003528!7.60e-11!29;UBERON:0001893!7.60e-11!29;UBERON:0002616!1.01e-10!49;UBERON:0000033!4.05e-10!63;UBERON:0003056!1.03e-09!49;UBERON:0000956!3.96e-09!21;UBERON:0001869!3.96e-09!21;UBERON:0000203!3.96e-09!21;UBERON:0002619!1.81e-08!17;UBERON:0004111!6.05e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.90e-10,29;UBERON:0002791,2.90e-10,29;UBERON:0001893,2.90e-10,29;UBERON:0002020,6.16e-10,34;UBERON:0001017,2.06e-08,73;UBERON:0000956,3.55e-08,21;UBERON:0001869,3.55e-08,21;UBERON:0000203,3.55e-08,21;UBERON:0002619,3.59e-08,17;UBERON:0001016,4.50e-08,75;UBERON:0002780,5.50e-07,39;UBERON:0001890,5.50e-07,39;UBERON:0006240,5.50e-07,39;UBERON:0003080,9.46e-07,40;UBERON:0002616,9.67e-07,46|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,1.28482726513177,3.9119567217402,0.436050312760893,1.31811709640683,0.972149495371417,0.699932108126813,1.43752564364972,0,0,0.336093799142464,0.257259436035947,0,0.515672092277442,2.42779753031517,2.64495489636016,0.633831403506179,1.0165335962074,0,0,2.96659908770092,0,1.19840044207362,1.15265491596466,0.414758449233911,0.540023753326763,0.420649922702764,0.571301968807607,0.441737081903227,0.979926393719632,0.670918297127655,0.919218786610021,0,0.638436690425939,0.153606533256243,1.58263545276233,2.28719109006024,1.56274011167028,0,0.56276261003168,0.30559649555362,0.589257170947335,0.569486723196412,1.3047961207771,0.302904773332736,0.377857800533928,0,0,0,0,0,0,0,0.511290967734173,0.519572009205738,0,0.985903938436763,1.28326477414318,0,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0.346970653532272,0.913396434936424,0.230615497256059,0.301445281105245,0.705532242814229,0.251333182659351,0.247194967734374,0.433798070759735,0.884610551949874,0.485300549842228,0,0,0,0.585561594023094,0.209446706813455,0,0.11981512450592,0.599902730993408,0,0.299581278809645,0.915001205637253,0.753926112677186,2.08589184230732,0.767146371990992,0.83115217823824,0.648965052271031,0.509196819251581,0.248813941220186,0.252722758433675,0.210441855886474,0.390361328888111,0,0,0.452114453507145,0.408218994907967,0.12811372028485,0.562210347358373,0.517406741478031,0.431135985865684,0.567318240503458,0.351902248327898,0.219195732427575,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.617068451549513,0,0,0.350296027101508,0.329119699826961,0.492502392237286,0.486412857275134,0.146199987425332,0,0.268412837520744,1.05144974282064,1.3377599609307,0,0,0,0,0.515469845288373,0,0.667134131534611,0,0,0.658795818896044,0,0.397912944082302,0.38992817423824,0,0,0,0.379335801906163,0.342745537829186,0,0.814605311381257,0.581857461502877,0.771494018793504,0.379419222745544,0,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.486405680325106,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0.325929952884052,0.509235257325564,0.469380496577004,1.34005005953453,2.61848004974615,0,1.10344600874334,0.44292937929755,0.797273843287435,0.327726629431476,0.690739927463582,0.723245292907558,1.50791283939272,0,0,0.275936746304732,0.321101179975584,0.234423373184406,1.14754461763673,0.504941854408746,0,0.780877488593277,0.430846795465598,0.716906393857656,0.668396022247182,0,0.404810701674894,0,0.395287777946524,0.963963949265421,1.27746076687442,0.35613120733451,1.62886959353576,0.329940245945071,0,0.728341908464944,0.906970670894253,0.188605079755898,0,0,0.258428293168221,0,1.06949213515416,0,0,1.03135543248187,0,0.540183282093931,0.646793418913773,0.214337035031592,0.532020700926821,0.713475270408282,0.493647061806363,0.304464949114599,0.23467170806371,0,0.220528398054962,0.32977250588296,0.322928853391811,0,0,0.492422699235184,0,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,0.954670618015114,0.474503990371703,0.406638934253697,0.432021363287205,0.627264888043406,0.218362563746178,0.134864346384821,0.578574190077352,0,0,0.621339313086926,0,0.598066184175915,0.165458490457098,0.777804753376191,0.387479470433193,0.506868376472335,0.469428954583016,0.651021924219751,0.314578033277133,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0.179427713218951,0,0.579568782096571,0.375364950902364,1.09890974560359,0.643105137237198,0,1.12950368523413,1.38097570952153,0.572895513439397,0.68741272937475,2.74033007908257,1.5107877947794,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0.518936737920883,0.399024873401031,0.341467211508268,0,0.838452650511929,0.367687016900028,0.44449345560323,1.23621034343337,1.60459604795908,1.01078884705519,1.01391719956096,0.377252682772152,0.468207537349412,0.320125762024346,0.516919220600519,0.476293691283074,0.695305955669133,0.38581844092741,0.824171801606613,0.588795680537589,0,0.354951612318675,0.476872379894642,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.355905054372522,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0.999242311751784,0,0.429742108096597,0.765153328275374,0,0.463735671240843|short_description=p5@Zfp580}}
|EntrezGene=68992
|HGNC=
|UniProt=Q9DB38
|association_with_transcript=-55bp_to_ENSMUST00000069324,NM_026900,uc009ezp.2_5end
|description=CAGE_peak_5_at_Zfp580_5end
|id=chr7:5003069..5003078,+
|ontology_enrichment_celltype=CL:0000221!2.35e-08!44;CL:0000133!2.35e-08!44;CL:0002319!6.20e-08!43;CL:0000055!6.93e-08!50
|ontology_enrichment_celltype_v019_2=CL:0002613,9.79e-09,3;CL:0002453,1.10e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.67e-15!73;UBERON:0005743!4.67e-15!73;UBERON:0000073!6.21e-15!75;UBERON:0001016!6.21e-15!75;UBERON:0004121!3.96e-13!102;UBERON:0000924!3.96e-13!102;UBERON:0006601!3.96e-13!102;UBERON:0001049!1.74e-12!52;UBERON:0005068!1.74e-12!52;UBERON:0006241!1.74e-12!52;UBERON:0007135!1.74e-12!52;UBERON:0002020!4.00e-12!34;UBERON:0002346!1.43e-11!71;UBERON:0003075!1.43e-11!71;UBERON:0007284!1.43e-11!71;UBERON:0002780!2.30e-11!39;UBERON:0001890!2.30e-11!39;UBERON:0006240!2.30e-11!39;UBERON:0000955!3.62e-11!50;UBERON:0006238!3.62e-11!50;UBERON:0003080!3.72e-11!40;UBERON:0002791!7.60e-11!29;UBERON:0003528!7.60e-11!29;UBERON:0001893!7.60e-11!29;UBERON:0002616!1.01e-10!49;UBERON:0000033!4.05e-10!63;UBERON:0003056!1.03e-09!49;UBERON:0000956!3.96e-09!21;UBERON:0001869!3.96e-09!21;UBERON:0000203!3.96e-09!21;UBERON:0002619!1.81e-08!17;UBERON:0004111!6.05e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.90e-10,29;UBERON:0002791,2.90e-10,29;UBERON:0001893,2.90e-10,29;UBERON:0002020,6.16e-10,34;UBERON:0001017,2.06e-08,73;UBERON:0000956,3.55e-08,21;UBERON:0001869,3.55e-08,21;UBERON:0000203,3.55e-08,21;UBERON:0002619,3.59e-08,17;UBERON:0001016,4.50e-08,75;UBERON:0002780,5.50e-07,39;UBERON:0001890,5.50e-07,39;UBERON:0006240,5.50e-07,39;UBERON:0003080,9.46e-07,40;UBERON:0002616,9.67e-07,46
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,1.28482726513177,3.9119567217402,0.436050312760893,1.31811709640683,0.972149495371417,0.699932108126813,1.43752564364972,0,0,0.336093799142464,0.257259436035947,0,0.515672092277442,2.42779753031517,2.64495489636016,0.633831403506179,1.0165335962074,0,0,2.96659908770092,0,1.19840044207362,1.15265491596466,0.414758449233911,0.540023753326763,0.420649922702764,0.571301968807607,0.441737081903227,0.979926393719632,0.670918297127655,0.919218786610021,0,0.638436690425939,0.153606533256243,1.58263545276233,2.28719109006024,1.56274011167028,0,0.56276261003168,0.30559649555362,0.589257170947335,0.569486723196412,1.3047961207771,0.302904773332736,0.377857800533928,0,0,0,0,0,0,0,0.511290967734173,0.519572009205738,0,0.985903938436763,1.28326477414318,0,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0.346970653532272,0.913396434936424,0.230615497256059,0.301445281105245,0.705532242814229,0.251333182659351,0.247194967734374,0.433798070759735,0.884610551949874,0.485300549842228,0,0,0,0.585561594023094,0.209446706813455,0,0.11981512450592,0.599902730993408,0,0.299581278809645,0.915001205637253,0.753926112677186,2.08589184230732,0.767146371990992,0.83115217823824,0.648965052271031,0.509196819251581,0.248813941220186,0.252722758433675,0.210441855886474,0.390361328888111,0,0,0.452114453507145,0.408218994907967,0.12811372028485,0.562210347358373,0.517406741478031,0.431135985865684,0.567318240503458,0.351902248327898,0.219195732427575,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.617068451549513,0,0,0.350296027101508,0.329119699826961,0.492502392237286,0.486412857275134,0.146199987425332,0,0.268412837520744,1.05144974282064,1.3377599609307,0,0,0,0,0.515469845288373,0,0.667134131534611,0,0,0.658795818896044,0,0.397912944082302,0.38992817423824,0,0,0,0.379335801906163,0.342745537829186,0,0.814605311381257,0.581857461502877,0.771494018793504,0.379419222745544,0,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.486405680325106,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0.325929952884052,0.509235257325564,0.469380496577004,1.34005005953453,2.61848004974615,0,1.10344600874334,0.44292937929755,0.797273843287435,0.327726629431476,0.690739927463582,0.723245292907558,1.50791283939272,0,0,0.275936746304732,0.321101179975584,0.234423373184406,1.14754461763673,0.504941854408746,0,0.780877488593277,0.430846795465598,0.716906393857656,0.668396022247182,0,0.404810701674894,0,0.395287777946524,0.963963949265421,1.27746076687442,0.35613120733451,1.62886959353576,0.329940245945071,0,0.728341908464944,0.906970670894253,0.188605079755898,0,0,0.258428293168221,0,1.06949213515416,0,0,1.03135543248187,0,0.540183282093931,0.646793418913773,0.214337035031592,0.532020700926821,0.713475270408282,0.493647061806363,0.304464949114599,0.23467170806371,0,0.220528398054962,0.32977250588296,0.322928853391811,0,0,0.492422699235184,0,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,0.954670618015114,0.474503990371703,0.406638934253697,0.432021363287205,0.627264888043406,0.218362563746178,0.134864346384821,0.578574190077352,0,0,0.621339313086926,0,0.598066184175915,0.165458490457098,0.777804753376191,0.387479470433193,0.506868376472335,0.469428954583016,0.651021924219751,0.314578033277133,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0.179427713218951,0,0.579568782096571,0.375364950902364,1.09890974560359,0.643105137237198,0,1.12950368523413,1.38097570952153,0.572895513439397,0.68741272937475,2.74033007908257,1.5107877947794,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0.518936737920883,0.399024873401031,0.341467211508268,0,0.838452650511929,0.367687016900028,0.44449345560323,1.23621034343337,1.60459604795908,1.01078884705519,1.01391719956096,0.377252682772152,0.468207537349412,0.320125762024346,0.516919220600519,0.476293691283074,0.695305955669133,0.38581844092741,0.824171801606613,0.588795680537589,0,0.354951612318675,0.476872379894642,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.355905054372522,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0.999242311751784,0,0.429742108096597,0.765153328275374,0,0.463735671240843
|short_description=p5@Zfp580
}}

Revision as of 13:30, 14 September 2013

Short description:p5@Zfp580
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Zfp580_5end
Coexpression cluster:NA
Association with transcript: -55bp_to_ENSMUST00000069324, NM_026900, uc009ezp.2_5end
EntrezGene:Zfp580
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Zfp580

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
striatum neuron9.79e-093
oligodendrocyte precursor cell1.10e-078

Uber anatomy
Ontology termp-valuen
brain grey matter2.90e-1029
regional part of telencephalon2.90e-1029
telencephalon2.90e-1029
gray matter6.16e-1034
central nervous system2.06e-0873
cerebral cortex3.55e-0821
cerebral hemisphere3.55e-0821
pallium3.55e-0821
regional part of cerebral cortex3.59e-0817
nervous system4.50e-0875
regional part of forebrain5.50e-0739
forebrain5.50e-0739
future forebrain5.50e-0739
anterior neural tube9.46e-0740
regional part of brain9.67e-0746







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:5003069..5003078,%2B&oldid=3049007"