FFCP PHASE1:Mm9::chr10:127162428..127162443,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21334|HGNC=|MCL_coexpression_id=1878|UniProt=P55099|association_with_transcript=-4bp_to_ENSMUST00000026466,NM_009312,uc007hkk.2_5end|description=CAGE_peak_1_at_Tac2_5end|id=chr10:127162428..127162443,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!3.05e-08!34;UBERON:0001049!3.22e-08!52;UBERON:0005068!3.22e-08!52;UBERON:0006241!3.22e-08!52;UBERON:0007135!3.22e-08!52;UBERON:0002021!5.56e-08!10;UBERON:0000411!5.56e-08!10;UBERON:0001950!5.56e-08!10;UBERON:0001017!7.04e-08!73;UBERON:0005743!7.04e-08!73;UBERON:0000955!3.18e-07!50;UBERON:0006238!3.18e-07!50;UBERON:0000073!3.85e-07!75;UBERON:0001016!3.85e-07!75;UBERON:0002791!4.76e-07!29;UBERON:0003528!4.76e-07!29;UBERON:0001893!4.76e-07!29;UBERON:0002346!6.89e-07!71;UBERON:0003075!6.89e-07!71;UBERON:0007284!6.89e-07!71;UBERON:0002616!8.28e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.63e-09,10;UBERON:0000411,1.63e-09,10;UBERON:0001950,1.63e-09,10;UBERON:0002020,4.71e-09,34;UBERON:0001049,4.67e-08,52;UBERON:0005068,4.67e-08,52;UBERON:0006241,4.67e-08,52;UBERON:0007135,4.67e-08,52;UBERON:0000073,6.02e-08,54;UBERON:0003528,2.07e-07,29;UBERON:0002791,2.07e-07,29;UBERON:0001893,2.07e-07,29;UBERON:0001017,2.29e-07,73;UBERON:0001016,7.81e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9919514253639,15.7930708564064,4.89693314689703,0,0,0.84877930359606,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0.523523743973798,1.76469446409304,0.683045484958446,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,1.03134418455488,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,1.34796496001021,2.16009501330705,0.630974884054146,18.5673139862472,72.4448814321292,0,0,0,0,16.7270412891596,4.30098293117482,0.791317726381163,0.457438218012048,2.08365348222704,0.837548997004143,133.374738577508,81.1358695694862,8.83885756421003,5.83723891276322,0,0,0,0,0,0,0,0,0,2.94933282276679,0,0,0,0.14084341977668,0,0,0,0,0,0,1.25602267690966,0,0.593768556259299,1.21439728736295,0.913396434936424,2.30615497256059,0.452167921657868,1.17588707135705,0.502666365318702,6.42706916109372,0.289198713839823,10.6153266233985,0.161766849947409,3.5334642953663,2.90925151881133,0,0.585561594023094,0.41889341362691,0,0,0,0,12.8819949888148,41.632554856495,1.38219787324151,30.4192560336484,21.4800984157478,57.7650763875577,25.7963608277735,7.63795228877372,2.23932547098167,5.05445516867349,10.1012090825508,0,0,0.180062129805349,0.150704817835715,0,0,0,25.6116337031625,0.862271971731369,1.51284864134255,0.703804496655795,9.20622076195814,0,0.348252166522167,0.205782136407943,8.7575077400137,0,0,0,2.48550927042602,3.98694301967864,0.540186184383045,0.946978942340841,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0,0,0,10.3042074796422,16.5676425930648,0,0,16.423195291213,43.8927309816229,19.330119198314,0.605050573870028,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,1.13800740571849,0.913988100877831,3.38123207019241,1.22190796707189,0.969762435838129,1.96380295692892,0.0632365371242573,0,0,0,0,15.6834399373128,7.46924181430171,12.1425540687821,10.7515864335907,8.20002343158217,6.87489799809833,6.61701116136864,0.648540907100142,1.64736847912849,0,0,0,0,0,0,0,1.13694847062291,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.2752663765573,28.9512865882742,0,0,0.315508219416257,0,2.36965737506079,4.30143836314594,8.46634961513098,9.05844898524264,0.404810701674894,2.33804686329049,1.18586333383957,17.9939937196212,0.425820255624806,1.78065603667255,2.11753047159649,0.659880491890142,0,23.7925023431882,4.23252979750651,0.565815239267694,3.54362271456927,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0.388076051348264,0,0,0.356737635204141,0.493647061806363,1.8267896946876,270.576479397458,2.1183207086382,0,0,0,0,0,0.164140899745061,0,131.837389729472,18.2831842453702,6.19160603889667,9.07453184111587,9.98352822124862,19.2738861086645,11.2101304871196,0,0,0,0,2.21435195506795,2.03319467126849,0.648032044930808,0.627264888043406,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,17.1944027950576,10.7548018797113,2.72231663681667,3.61647505737647,2.53434188236167,4.10750335260139,0.13020438484395,0.209718688851422,0.241584120826006,0,2.21207784439725,0.405450430580328,0.102710957164827,0.51968329191118,1.61124026100733,2.58285761215644,2.28371354087941,1.77227432609493,2.22126189885925,2.13379058634,2.62148081355785,5.26272555994663,2.11666051608725,2.80504565235765,0.226730383615211,0,0,0,0,125.184211125938,0.183151624267265,0,0,54.2161768912384,34.0640675015311,44.6858500482729,37.6358469332676,28.0883833105963,31.7265436903674,21.6007200074178,35.5753750547134,29.9073989929575,33.1366599521165,1.3492355185943,14.3648954424371,13.6586884603307,2.18796045361465,2.93458427679175,0.367687016900028,0.88898691120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| ||
|EntrezGene=21334 | |||
|HGNC= | |||
|MCL_coexpression_id=1878 | |||
|UniProt=P55099 | |||
|association_with_transcript=-4bp_to_ENSMUST00000026466,NM_009312,uc007hkk.2_5end | |||
|description=CAGE_peak_1_at_Tac2_5end | |||
|id=chr10:127162428..127162443,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.05e-08!34;UBERON:0001049!3.22e-08!52;UBERON:0005068!3.22e-08!52;UBERON:0006241!3.22e-08!52;UBERON:0007135!3.22e-08!52;UBERON:0002021!5.56e-08!10;UBERON:0000411!5.56e-08!10;UBERON:0001950!5.56e-08!10;UBERON:0001017!7.04e-08!73;UBERON:0005743!7.04e-08!73;UBERON:0000955!3.18e-07!50;UBERON:0006238!3.18e-07!50;UBERON:0000073!3.85e-07!75;UBERON:0001016!3.85e-07!75;UBERON:0002791!4.76e-07!29;UBERON:0003528!4.76e-07!29;UBERON:0001893!4.76e-07!29;UBERON:0002346!6.89e-07!71;UBERON:0003075!6.89e-07!71;UBERON:0007284!6.89e-07!71;UBERON:0002616!8.28e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.63e-09,10;UBERON:0000411,1.63e-09,10;UBERON:0001950,1.63e-09,10;UBERON:0002020,4.71e-09,34;UBERON:0001049,4.67e-08,52;UBERON:0005068,4.67e-08,52;UBERON:0006241,4.67e-08,52;UBERON:0007135,4.67e-08,52;UBERON:0000073,6.02e-08,54;UBERON:0003528,2.07e-07,29;UBERON:0002791,2.07e-07,29;UBERON:0001893,2.07e-07,29;UBERON:0001017,2.29e-07,73;UBERON:0001016,7.81e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9919514253639,15.7930708564064,4.89693314689703,0,0,0.84877930359606,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0.523523743973798,1.76469446409304,0.683045484958446,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,1.03134418455488,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,1.34796496001021,2.16009501330705,0.630974884054146,18.5673139862472,72.4448814321292,0,0,0,0,16.7270412891596,4.30098293117482,0.791317726381163,0.457438218012048,2.08365348222704,0.837548997004143,133.374738577508,81.1358695694862,8.83885756421003,5.83723891276322,0,0,0,0,0,0,0,0,0,2.94933282276679,0,0,0,0.14084341977668,0,0,0,0,0,0,1.25602267690966,0,0.593768556259299,1.21439728736295,0.913396434936424,2.30615497256059,0.452167921657868,1.17588707135705,0.502666365318702,6.42706916109372,0.289198713839823,10.6153266233985,0.161766849947409,3.5334642953663,2.90925151881133,0,0.585561594023094,0.41889341362691,0,0,0,0,12.8819949888148,41.632554856495,1.38219787324151,30.4192560336484,21.4800984157478,57.7650763875577,25.7963608277735,7.63795228877372,2.23932547098167,5.05445516867349,10.1012090825508,0,0,0.180062129805349,0.150704817835715,0,0,0,25.6116337031625,0.862271971731369,1.51284864134255,0.703804496655795,9.20622076195814,0,0.348252166522167,0.205782136407943,8.7575077400137,0,0,0,2.48550927042602,3.98694301967864,0.540186184383045,0.946978942340841,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0,0,0,10.3042074796422,16.5676425930648,0,0,16.423195291213,43.8927309816229,19.330119198314,0.605050573870028,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,1.13800740571849,0.913988100877831,3.38123207019241,1.22190796707189,0.969762435838129,1.96380295692892,0.0632365371242573,0,0,0,0,15.6834399373128,7.46924181430171,12.1425540687821,10.7515864335907,8.20002343158217,6.87489799809833,6.61701116136864,0.648540907100142,1.64736847912849,0,0,0,0,0,0,0,1.13694847062291,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.2752663765573,28.9512865882742,0,0,0.315508219416257,0,2.36965737506079,4.30143836314594,8.46634961513098,9.05844898524264,0.404810701674894,2.33804686329049,1.18586333383957,17.9939937196212,0.425820255624806,1.78065603667255,2.11753047159649,0.659880491890142,0,23.7925023431882,4.23252979750651,0.565815239267694,3.54362271456927,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0.388076051348264,0,0,0.356737635204141,0.493647061806363,1.8267896946876,270.576479397458,2.1183207086382,0,0,0,0,0,0.164140899745061,0,131.837389729472,18.2831842453702,6.19160603889667,9.07453184111587,9.98352822124862,19.2738861086645,11.2101304871196,0,0,0,0,2.21435195506795,2.03319467126849,0.648032044930808,0.627264888043406,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,17.1944027950576,10.7548018797113,2.72231663681667,3.61647505737647,2.53434188236167,4.10750335260139,0.13020438484395,0.209718688851422,0.241584120826006,0,2.21207784439725,0.405450430580328,0.102710957164827,0.51968329191118,1.61124026100733,2.58285761215644,2.28371354087941,1.77227432609493,2.22126189885925,2.13379058634,2.62148081355785,5.26272555994663,2.11666051608725,2.80504565235765,0.226730383615211,0,0,0,0,125.184211125938,0.183151624267265,0,0,54.2161768912384,34.0640675015311,44.6858500482729,37.6358469332676,28.0883833105963,31.7265436903674,21.6007200074178,35.5753750547134,29.9073989929575,33.1366599521165,1.3492355185943,14.3648954424371,13.6586884603307,2.18796045361465,2.93458427679175,0.367687016900028,0.888986911206461,1.64828045791115,1.92551525755089,2.02157769411038,1.52087579934144,1.88626341386076,0.936415074698824,0.768301828858431,0.976402972245426,1.90517476513229,1.0429589335037,1.15745532278223,0.412085900803307,1.03039244094078,2.05721551431249,1.06485483695602,0.715308569841963,1.45346416632329,0.658765662907314,1.01537529470012,0.914639864363863,1.05227884575137,0.679020569229309,1.68342681497322,1.18635018124174,1.28055827088233,1.22769312950907,0.464810523557898,1.92906610981141,0.999242311751784,0.233931608445408,1.07435527024149,0.57386499620653,1.54413993383661,1.39120701372253 | |||
|short_description=p1@Tac2 | |||
}} |
Revision as of 16:05, 12 September 2013
Short description: | p1@Tac2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tac2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1878 |
Association with transcript: | -4bp_to_ENSMUST00000026466, NM_009312, uc007hkk.2_5end |
EntrezGene: | Tac2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.63e-09 | 10 |
visual cortex | 1.63e-09 | 10 |
neocortex | 1.63e-09 | 10 |
gray matter | 4.71e-09 | 34 |
neural tube | 4.67e-08 | 52 |
neural rod | 4.67e-08 | 52 |
future spinal cord | 4.67e-08 | 52 |
neural keel | 4.67e-08 | 52 |
regional part of nervous system | 6.02e-08 | 54 |
brain grey matter | 2.07e-07 | 29 |
regional part of telencephalon | 2.07e-07 | 29 |
telencephalon | 2.07e-07 | 29 |
central nervous system | 2.29e-07 | 73 |
nervous system | 7.81e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.