FFCP PHASE1:Mm9::chr14:41950730..41950741,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=32|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:41950730..41950741,+|id=chr14:41950730..41950741,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!7.59e-42!14;UBERON:0000117!7.59e-42!14;UBERON:0000171!7.59e-42!14;UBERON:0000170!7.59e-42!14;UBERON:0005597!7.59e-42!14;UBERON:0000118!7.59e-42!14;UBERON:0005153!2.75e-34!17;UBERON:0005178!2.75e-34!17;UBERON:0005181!2.75e-34!17;UBERON:0002224!2.75e-34!17;UBERON:0000915!2.75e-34!17;UBERON:0008947!2.75e-34!17;UBERON:0003258!2.75e-34!17;UBERON:0005157!3.39e-21!27;UBERON:0000065!1.45e-13!41;UBERON:0001004!3.26e-13!42;UBERON:0009569!1.20e-11!66;UBERON:0005911!4.49e-11!69;UBERON:0000466!1.78e-09!79;UBERON:0000464!2.06e-09!57;UBERON:0005177!1.07e-08!85;UBERON:0001041!6.49e-08!92;UBERON:0000077!2.01e-07!97;UBERON:0002100!2.49e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0002048,9.89e-56,14;UBERON:0000117,9.89e-56,14;UBERON:0000171,9.89e-56,14;UBERON:0000170,9.89e-56,14;UBERON:0005597,9.89e-56,14;UBERON:0000118,9.89e-56,14;UBERON:0005153,6.54e-46,17;UBERON:0005178,6.54e-46,17;UBERON:0005181,6.54e-46,17;UBERON:0002224,6.54e-46,17;UBERON:0000915,6.54e-46,17;UBERON:0008947,6.54e-46,17;UBERON:0003258,6.54e-46,17;UBERON:0005157,4.97e-39,20;UBERON:0000065,5.33e-19,41;UBERON:0001004,1.52e-18,42;UBERON:0009569,1.02e-11,66;UBERON:0005911,3.39e-11,69;UBERON:0005177,9.73e-10,79;UBERON:0001041,1.30e-09,80;UBERON:0002100,1.67e-08,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,1.66277871149944,0,0,0,0,0.167506257441816,1.42826184531608,2.34160377429359,1.57635144106191,2.87904096543407,2.07291199254733,5.89907932976657,5.69860440157455,3.32692834737477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p@chr14:41950730..41950741,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=32 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:41950730..41950741,+ | |||
|id=chr14:41950730..41950741,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!7.59e-42!14;UBERON:0000117!7.59e-42!14;UBERON:0000171!7.59e-42!14;UBERON:0000170!7.59e-42!14;UBERON:0005597!7.59e-42!14;UBERON:0000118!7.59e-42!14;UBERON:0005153!2.75e-34!17;UBERON:0005178!2.75e-34!17;UBERON:0005181!2.75e-34!17;UBERON:0002224!2.75e-34!17;UBERON:0000915!2.75e-34!17;UBERON:0008947!2.75e-34!17;UBERON:0003258!2.75e-34!17;UBERON:0005157!3.39e-21!27;UBERON:0000065!1.45e-13!41;UBERON:0001004!3.26e-13!42;UBERON:0009569!1.20e-11!66;UBERON:0005911!4.49e-11!69;UBERON:0000466!1.78e-09!79;UBERON:0000464!2.06e-09!57;UBERON:0005177!1.07e-08!85;UBERON:0001041!6.49e-08!92;UBERON:0000077!2.01e-07!97;UBERON:0002100!2.49e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,9.89e-56,14;UBERON:0000117,9.89e-56,14;UBERON:0000171,9.89e-56,14;UBERON:0000170,9.89e-56,14;UBERON:0005597,9.89e-56,14;UBERON:0000118,9.89e-56,14;UBERON:0005153,6.54e-46,17;UBERON:0005178,6.54e-46,17;UBERON:0005181,6.54e-46,17;UBERON:0002224,6.54e-46,17;UBERON:0000915,6.54e-46,17;UBERON:0008947,6.54e-46,17;UBERON:0003258,6.54e-46,17;UBERON:0005157,4.97e-39,20;UBERON:0000065,5.33e-19,41;UBERON:0001004,1.52e-18,42;UBERON:0009569,1.02e-11,66;UBERON:0005911,3.39e-11,69;UBERON:0005177,9.73e-10,79;UBERON:0001041,1.30e-09,80;UBERON:0002100,1.67e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,1.66277871149944,0,0,0,0,0.167506257441816,1.42826184531608,2.34160377429359,1.57635144106191,2.87904096543407,2.07291199254733,5.89907932976657,5.69860440157455,3.32692834737477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:41950730..41950741,+ | |||
}} |
Revision as of 02:08, 13 September 2013
Short description: | p@chr14:41950730..41950741, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:41950730..41950741, + |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 9.89e-56 | 14 |
respiratory tube | 9.89e-56 | 14 |
respiration organ | 9.89e-56 | 14 |
pair of lungs | 9.89e-56 | 14 |
lung primordium | 9.89e-56 | 14 |
lung bud | 9.89e-56 | 14 |
epithelial bud | 6.54e-46 | 17 |
thoracic cavity element | 6.54e-46 | 17 |
thoracic segment organ | 6.54e-46 | 17 |
thoracic cavity | 6.54e-46 | 17 |
thoracic segment of trunk | 6.54e-46 | 17 |
respiratory primordium | 6.54e-46 | 17 |
endoderm of foregut | 6.54e-46 | 17 |
epithelial fold | 4.97e-39 | 20 |
respiratory tract | 5.33e-19 | 41 |
respiratory system | 1.52e-18 | 42 |
subdivision of trunk | 1.02e-11 | 66 |
endo-epithelium | 3.39e-11 | 69 |
trunk region element | 9.73e-10 | 79 |
foregut | 1.30e-09 | 80 |
trunk | 1.67e-08 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.