FFCP PHASE1:Mm9::chr5:52760058..52760084,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=995|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:52760058..52760084,+|id=chr5:52760058..52760084,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,2.02e-11,3;CL:0000192,1.34e-10,3;CL:0000359,1.34e-10,3;CL:0002539,1.34e-10,3;CL:0000514,1.34e-10,3;CL:0000680,4.41e-09,6;CL:0000187,4.41e-09,6;CL:0000056,4.41e-09,6;CL:0000222,8.46e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!4.17e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0000947,4.00e-14,4;UBERON:0001637,4.00e-14,4;UBERON:0004573,4.00e-14,4;UBERON:0003509,4.00e-14,4;UBERON:0004571,4.00e-14,4;UBERON:0010191,4.00e-14,4;UBERON:0004572,4.00e-14,4;UBERON:0000055,2.51e-11,5;UBERON:0007500,2.51e-11,5;UBERON:0001981,2.51e-11,5;UBERON:0002049,2.51e-11,5;UBERON:0007798,2.51e-11,5;UBERON:0004537,2.51e-11,5;UBERON:0006965,2.51e-11,5;UBERON:0001135,1.34e-10,3;UBERON:0004237,1.34e-10,3;UBERON:0004695,1.34e-10,3;UBERON:0002111,1.34e-10,3;UBERON:0004178,1.34e-10,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.01376931219515,1.65192076945513,3.12956537739216,0,0.878744730937887,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0.514518872071894,1.43266719969378,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0,0.768436610643109,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0.869593466105033,0.860423876981386,0,0,2.59910566979068,0,0.561777680527007,0.170430322578058,0,0,0,1.28326477414318,2.54805239706646,7.11066703153331,0,0,0,0.91347103775248,2.84831672011889,1.63286352971307,0,0.304465478312141,0,0.60289056221049,0.352766121407114,1.0053327306374,0.988779870937496,6.2177723475562,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0,0,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0.898819408654221,0,0,0,0,1.1270773567308,0.203651327845314,0.581857461502877,0.701358198903186,0.948548056863859,1.47610147979602,1.8839847340965,0.987177311374404,1.1858105083486,0,0,0,0,0.241177159752417,0,0.287696137450811,0.648540907100142,0.274561413188081,4.31304619582064,0,0.312037673114561,0.757736633841335,0.179397413521912,0.964887042726734,2.03228509183265,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,3.27726629431476,1.38147985492716,2.31438493730419,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0,0.425820255624806,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.42366414172764,0.220528398054962,1.6488625294148,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0.136694227721025,0,0,0,0,1.90934123603023,0,0,0,0,0,0,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.419437377702843,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.290692833264657,0.282328141245992,0.25384382367503,0,0,0.135804113845862,1.12228454331548,0.355905054372522,0,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0.57386499620653,0,0.463735671240843|short_description=p@chr5:52760058..52760084,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=995 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:52760058..52760084,+ | |||
|id=chr5:52760058..52760084,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,2.02e-11,3;CL:0000192,1.34e-10,3;CL:0000359,1.34e-10,3;CL:0002539,1.34e-10,3;CL:0000514,1.34e-10,3;CL:0000680,4.41e-09,6;CL:0000187,4.41e-09,6;CL:0000056,4.41e-09,6;CL:0000222,8.46e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!4.17e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,4.00e-14,4;UBERON:0001637,4.00e-14,4;UBERON:0004573,4.00e-14,4;UBERON:0003509,4.00e-14,4;UBERON:0004571,4.00e-14,4;UBERON:0010191,4.00e-14,4;UBERON:0004572,4.00e-14,4;UBERON:0000055,2.51e-11,5;UBERON:0007500,2.51e-11,5;UBERON:0001981,2.51e-11,5;UBERON:0002049,2.51e-11,5;UBERON:0007798,2.51e-11,5;UBERON:0004537,2.51e-11,5;UBERON:0006965,2.51e-11,5;UBERON:0001135,1.34e-10,3;UBERON:0004237,1.34e-10,3;UBERON:0004695,1.34e-10,3;UBERON:0002111,1.34e-10,3;UBERON:0004178,1.34e-10,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.01376931219515,1.65192076945513,3.12956537739216,0,0.878744730937887,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0.514518872071894,1.43266719969378,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0,0.768436610643109,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0.869593466105033,0.860423876981386,0,0,2.59910566979068,0,0.561777680527007,0.170430322578058,0,0,0,1.28326477414318,2.54805239706646,7.11066703153331,0,0,0,0.91347103775248,2.84831672011889,1.63286352971307,0,0.304465478312141,0,0.60289056221049,0.352766121407114,1.0053327306374,0.988779870937496,6.2177723475562,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0,0,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0.898819408654221,0,0,0,0,1.1270773567308,0.203651327845314,0.581857461502877,0.701358198903186,0.948548056863859,1.47610147979602,1.8839847340965,0.987177311374404,1.1858105083486,0,0,0,0,0.241177159752417,0,0.287696137450811,0.648540907100142,0.274561413188081,4.31304619582064,0,0.312037673114561,0.757736633841335,0.179397413521912,0.964887042726734,2.03228509183265,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,3.27726629431476,1.38147985492716,2.31438493730419,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0,0.425820255624806,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.42366414172764,0.220528398054962,1.6488625294148,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0.136694227721025,0,0,0,0,1.90934123603023,0,0,0,0,0,0,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.419437377702843,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.290692833264657,0.282328141245992,0.25384382367503,0,0,0.135804113845862,1.12228454331548,0.355905054372522,0,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0.57386499620653,0,0.463735671240843 | |||
|short_description=p@chr5:52760058..52760084,+ | |||
}} |
Revision as of 07:44, 14 September 2013
Short description: | p@chr5:52760058..52760084, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:52760058..52760084, + |
Coexpression cluster: | MCL_coexpression_mm9:995 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 2.02e-11 | 3 |
smooth muscle cell | 1.34e-10 | 3 |
vascular associated smooth muscle cell | 1.34e-10 | 3 |
aortic smooth muscle cell | 1.34e-10 | 3 |
smooth muscle myoblast | 1.34e-10 | 3 |
muscle precursor cell | 4.41e-09 | 6 |
muscle cell | 4.41e-09 | 6 |
myoblast | 4.41e-09 | 6 |
mesodermal cell | 8.46e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
aorta | 4.00e-14 | 4 |
artery | 4.00e-14 | 4 |
systemic artery | 4.00e-14 | 4 |
arterial blood vessel | 4.00e-14 | 4 |
systemic arterial system | 4.00e-14 | 4 |
aortic system | 4.00e-14 | 4 |
arterial system | 4.00e-14 | 4 |
vessel | 2.51e-11 | 5 |
epithelial tube open at both ends | 2.51e-11 | 5 |
blood vessel | 2.51e-11 | 5 |
vasculature | 2.51e-11 | 5 |
vascular system | 2.51e-11 | 5 |
blood vasculature | 2.51e-11 | 5 |
vascular cord | 2.51e-11 | 5 |
smooth muscle tissue | 1.34e-10 | 3 |
blood vessel smooth muscle | 1.34e-10 | 3 |
arterial system smooth muscle | 1.34e-10 | 3 |
artery smooth muscle tissue | 1.34e-10 | 3 |
aorta smooth muscle tissue | 1.34e-10 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.