FFCP PHASE1:Mm9::chr17:31770024..31770046,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=23|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:31770024..31770046,-|id=chr17:31770024..31770046,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,4.11e-09,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!7.72e-24!59;UBERON:0001007!7.84e-23!128;UBERON:0001555!7.84e-23!128;UBERON:0007026!7.84e-23!128;UBERON:0004119!3.88e-22!130;UBERON:0000925!3.88e-22!130;UBERON:0006595!3.88e-22!130;UBERON:0004921!8.06e-22!126;UBERON:0004185!8.06e-22!126;UBERON:0000160!5.85e-18!43;UBERON:0005177!5.34e-17!85;UBERON:0001264!1.87e-14!12;UBERON:0003922!1.87e-14!12;UBERON:0002114!1.87e-14!12;UBERON:0003923!1.87e-14!12;UBERON:0003924!1.87e-14!12;UBERON:0003921!1.87e-14!12;UBERON:0002107!8.56e-14!22;UBERON:0007499!8.56e-14!22;UBERON:0006925!8.56e-14!22;UBERON:0009497!8.56e-14!22;UBERON:0000015!8.56e-14!22;UBERON:0002423!8.56e-14!22;UBERON:0006235!8.56e-14!22;UBERON:0008835!8.56e-14!22;UBERON:0003894!8.56e-14!22;UBERON:0004161!8.56e-14!22;UBERON:0008836!8.56e-14!22;UBERON:0005172!1.27e-13!49;UBERON:0005173!1.27e-13!49;UBERON:0002417!1.27e-13!49;UBERON:0000916!1.27e-13!49;UBERON:0002100!2.26e-13!98;UBERON:0001041!2.29e-13!92;UBERON:0002108!5.13e-13!16;UBERON:0001045!5.46e-13!13;UBERON:0009854!6.60e-13!23;UBERON:0009856!6.60e-13!23;UBERON:0002075!9.23e-13!19;UBERON:0000077!1.34e-12!97;UBERON:0000466!1.54e-12!79;UBERON:0003104!1.82e-11!131;UBERON:0009142!1.82e-11!131;UBERON:0002365!2.35e-11!25;UBERON:0002330!2.35e-11!25;UBERON:0000949!1.50e-10!72;UBERON:0009569!2.87e-10!66;UBERON:0000481!3.12e-10!230|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.40e-22,12;UBERON:0002075,3.51e-15,19;UBERON:0002107,7.06e-15,22;UBERON:0007499,7.06e-15,22;UBERON:0006925,7.06e-15,22;UBERON:0009497,7.06e-15,22;UBERON:0000015,7.06e-15,22;UBERON:0002423,7.06e-15,22;UBERON:0006235,7.06e-15,22;UBERON:0008835,7.06e-15,22;UBERON:0003894,7.06e-15,22;UBERON:0004161,7.06e-15,22;UBERON:0008836,7.06e-15,22;UBERON:0005177,1.03e-14,79;UBERON:0009854,4.65e-14,23;UBERON:0009856,4.65e-14,23;UBERON:0002365,1.27e-12,25;UBERON:0002330,1.27e-12,25;UBERON:0000949,2.29e-12,72;UBERON:0002100,6.61e-12,90;UBERON:0004921,1.58e-09,114;UBERON:0001007,3.23e-09,116;UBERON:0001555,3.23e-09,116;UBERON:0007026,3.23e-09,116;UBERON:0004119,6.43e-09,118;UBERON:0000925,6.43e-09,118;UBERON:0006595,6.43e-09,118;UBERON:0005409,9.96e-09,47;UBERON:0005172,5.49e-08,49;UBERON:0005173,5.49e-08,49;UBERON:0002417,5.49e-08,49;UBERON:0000916,5.49e-08,49;UBERON:0002323,4.42e-07,37;UBERON:0004458,4.42e-07,37;UBERON:0003886,8.36e-07,38|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,14.6272059086836,8.15965600449301,39.9380361811985,16.2444104361917,9.85659151614138,12.6399978118577,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,8.10705546005326,0,0.148442139064825,0,0.304465478312141,0.461230994512117,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,6.27795687669216,0,0,0,0.38660238396628,2.62188582010345,1.11189021922435,1.71203063501303,2.37264530772256,0.164698954724011,3.01602250560323,1.59165177632921,4.48417400373976,8.08937467788799,1.72910439899755,2.19055400579804,0,0.228497025219458,0,0,0,0.210407459670956,0.189709611372772,1.18088118383682,1.255989822731,2.09775178667061,25.791378556582,0,0,0,0.405720242777006,0.482354319504834,1.01850340712568,0.575392274901621,0.162135226775035,3.29473695825698,2.87536413054709,3.34926852901653,4.68056509671841,14.3969960429854,22.424676690239,60.3054401704209,0,0.189491411770485,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0.178065603667255,0,1.64970122972535,119.470624505967,6.31229654002952,17.2324427469908,66.3889880740761,71.463058077147,57.7978078134584,26.1012576099903,38.1710415951381,53.4746067577082,92.5987700751941,147.586052004998,137.170272520089,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,3.49777003955821,0,0,3.30218988741156,0.740778109478847,0.188368457004691,0.136694227721025,0,0,0,0,6.68269432610579,0,4.67634774391752,1.94409613479242,0,2.40198820120795,1.61837215661785,0.743881101528023,0.523511883968059,9.20266310371729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0.467863216890817,0,0,0,0|short_description=p@chr17:31770024..31770046,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=23 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:31770024..31770046,- | |||
|id=chr17:31770024..31770046,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.11e-09,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.72e-24!59;UBERON:0001007!7.84e-23!128;UBERON:0001555!7.84e-23!128;UBERON:0007026!7.84e-23!128;UBERON:0004119!3.88e-22!130;UBERON:0000925!3.88e-22!130;UBERON:0006595!3.88e-22!130;UBERON:0004921!8.06e-22!126;UBERON:0004185!8.06e-22!126;UBERON:0000160!5.85e-18!43;UBERON:0005177!5.34e-17!85;UBERON:0001264!1.87e-14!12;UBERON:0003922!1.87e-14!12;UBERON:0002114!1.87e-14!12;UBERON:0003923!1.87e-14!12;UBERON:0003924!1.87e-14!12;UBERON:0003921!1.87e-14!12;UBERON:0002107!8.56e-14!22;UBERON:0007499!8.56e-14!22;UBERON:0006925!8.56e-14!22;UBERON:0009497!8.56e-14!22;UBERON:0000015!8.56e-14!22;UBERON:0002423!8.56e-14!22;UBERON:0006235!8.56e-14!22;UBERON:0008835!8.56e-14!22;UBERON:0003894!8.56e-14!22;UBERON:0004161!8.56e-14!22;UBERON:0008836!8.56e-14!22;UBERON:0005172!1.27e-13!49;UBERON:0005173!1.27e-13!49;UBERON:0002417!1.27e-13!49;UBERON:0000916!1.27e-13!49;UBERON:0002100!2.26e-13!98;UBERON:0001041!2.29e-13!92;UBERON:0002108!5.13e-13!16;UBERON:0001045!5.46e-13!13;UBERON:0009854!6.60e-13!23;UBERON:0009856!6.60e-13!23;UBERON:0002075!9.23e-13!19;UBERON:0000077!1.34e-12!97;UBERON:0000466!1.54e-12!79;UBERON:0003104!1.82e-11!131;UBERON:0009142!1.82e-11!131;UBERON:0002365!2.35e-11!25;UBERON:0002330!2.35e-11!25;UBERON:0000949!1.50e-10!72;UBERON:0009569!2.87e-10!66;UBERON:0000481!3.12e-10!230 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.40e-22,12;UBERON:0002075,3.51e-15,19;UBERON:0002107,7.06e-15,22;UBERON:0007499,7.06e-15,22;UBERON:0006925,7.06e-15,22;UBERON:0009497,7.06e-15,22;UBERON:0000015,7.06e-15,22;UBERON:0002423,7.06e-15,22;UBERON:0006235,7.06e-15,22;UBERON:0008835,7.06e-15,22;UBERON:0003894,7.06e-15,22;UBERON:0004161,7.06e-15,22;UBERON:0008836,7.06e-15,22;UBERON:0005177,1.03e-14,79;UBERON:0009854,4.65e-14,23;UBERON:0009856,4.65e-14,23;UBERON:0002365,1.27e-12,25;UBERON:0002330,1.27e-12,25;UBERON:0000949,2.29e-12,72;UBERON:0002100,6.61e-12,90;UBERON:0004921,1.58e-09,114;UBERON:0001007,3.23e-09,116;UBERON:0001555,3.23e-09,116;UBERON:0007026,3.23e-09,116;UBERON:0004119,6.43e-09,118;UBERON:0000925,6.43e-09,118;UBERON:0006595,6.43e-09,118;UBERON:0005409,9.96e-09,47;UBERON:0005172,5.49e-08,49;UBERON:0005173,5.49e-08,49;UBERON:0002417,5.49e-08,49;UBERON:0000916,5.49e-08,49;UBERON:0002323,4.42e-07,37;UBERON:0004458,4.42e-07,37;UBERON:0003886,8.36e-07,38 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,14.6272059086836,8.15965600449301,39.9380361811985,16.2444104361917,9.85659151614138,12.6399978118577,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,8.10705546005326,0,0.148442139064825,0,0.304465478312141,0.461230994512117,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,6.27795687669216,0,0,0,0.38660238396628,2.62188582010345,1.11189021922435,1.71203063501303,2.37264530772256,0.164698954724011,3.01602250560323,1.59165177632921,4.48417400373976,8.08937467788799,1.72910439899755,2.19055400579804,0,0.228497025219458,0,0,0,0.210407459670956,0.189709611372772,1.18088118383682,1.255989822731,2.09775178667061,25.791378556582,0,0,0,0.405720242777006,0.482354319504834,1.01850340712568,0.575392274901621,0.162135226775035,3.29473695825698,2.87536413054709,3.34926852901653,4.68056509671841,14.3969960429854,22.424676690239,60.3054401704209,0,0.189491411770485,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0.178065603667255,0,1.64970122972535,119.470624505967,6.31229654002952,17.2324427469908,66.3889880740761,71.463058077147,57.7978078134584,26.1012576099903,38.1710415951381,53.4746067577082,92.5987700751941,147.586052004998,137.170272520089,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,3.49777003955821,0,0,3.30218988741156,0.740778109478847,0.188368457004691,0.136694227721025,0,0,0,0,6.68269432610579,0,4.67634774391752,1.94409613479242,0,2.40198820120795,1.61837215661785,0.743881101528023,0.523511883968059,9.20266310371729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr17:31770024..31770046,- | |||
}} |
Revision as of 14:04, 13 September 2013
Short description: | p@chr17:31770024..31770046, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:31770024..31770046, - |
Coexpression cluster: | MCL_coexpression_mm9:23 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.11e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
pancreas | 1.40e-22 | 12 |
viscus | 3.51e-15 | 19 |
liver | 7.06e-15 | 22 |
epithelial sac | 7.06e-15 | 22 |
digestive gland | 7.06e-15 | 22 |
epithelium of foregut-midgut junction | 7.06e-15 | 22 |
anatomical boundary | 7.06e-15 | 22 |
hepatobiliary system | 7.06e-15 | 22 |
foregut-midgut junction | 7.06e-15 | 22 |
hepatic diverticulum | 7.06e-15 | 22 |
liver primordium | 7.06e-15 | 22 |
septum transversum | 7.06e-15 | 22 |
liver bud | 7.06e-15 | 22 |
trunk region element | 1.03e-14 | 79 |
digestive tract diverticulum | 4.65e-14 | 23 |
sac | 4.65e-14 | 23 |
exocrine gland | 1.27e-12 | 25 |
exocrine system | 1.27e-12 | 25 |
endocrine system | 2.29e-12 | 72 |
trunk | 6.61e-12 | 90 |
subdivision of digestive tract | 1.58e-09 | 114 |
digestive system | 3.23e-09 | 116 |
digestive tract | 3.23e-09 | 116 |
primitive gut | 3.23e-09 | 116 |
endoderm-derived structure | 6.43e-09 | 118 |
endoderm | 6.43e-09 | 118 |
presumptive endoderm | 6.43e-09 | 118 |
gastrointestinal system | 9.96e-09 | 47 |
abdomen element | 5.49e-08 | 49 |
abdominal segment element | 5.49e-08 | 49 |
abdominal segment of trunk | 5.49e-08 | 49 |
abdomen | 5.49e-08 | 49 |
body cavity | 4.42e-07 | 37 |
body cavity or lining | 4.42e-07 | 37 |
body cavity precursor | 8.36e-07 | 38 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.