FFCP PHASE1:Mm9::chr8:56040566..56040584,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=234267|HGNC=|MCL_coexpression_id=1|UniProt=P35802,Q542P2|association_with_transcript=485bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end|description=CAGE_peak_8_at_Gpm6a_5end|id=chr8:56040566..56040584,+|ontology_enrichment_celltype=CL:0000117!2.46e-18!23;CL:0000337!2.46e-18!23;CL:0000540!2.49e-10!33;CL:0000047!2.49e-10!33;CL:0000031!2.49e-10!33;CL:0000404!2.49e-10!33;CL:0000393!1.28e-07!39;CL:0000211!1.28e-07!39;CL:0002319!2.01e-07!43;CL:0000221!4.34e-07!44;CL:0000133!4.34e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,3.08e-22,23;CL:0000337,3.08e-22,23;CL:0000540,2.49e-13,33;CL:0000047,2.49e-13,33;CL:0000031,2.49e-13,33;CL:0000404,2.49e-13,33;CL:0000393,3.02e-10,39;CL:0000211,3.02e-10,39;CL:0002319,1.07e-08,43;CL:0000221,2.34e-08,44;CL:0000133,2.34e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.89e-35!63;UBERON:0001049!1.53e-32!52;UBERON:0005068!1.53e-32!52;UBERON:0006241!1.53e-32!52;UBERON:0007135!1.53e-32!52;UBERON:0003056!2.83e-32!49;UBERON:0002346!1.31e-31!71;UBERON:0003075!1.31e-31!71;UBERON:0007284!1.31e-31!71;UBERON:0000955!1.77e-31!50;UBERON:0006238!1.77e-31!50;UBERON:0002616!1.68e-30!49;UBERON:0001017!7.75e-29!73;UBERON:0005743!7.75e-29!73;UBERON:0000073!1.62e-28!75;UBERON:0001016!1.62e-28!75;UBERON:0004121!1.32e-25!102;UBERON:0000924!1.32e-25!102;UBERON:0006601!1.32e-25!102;UBERON:0002020!1.35e-25!34;UBERON:0003080!4.18e-25!40;UBERON:0002780!4.98e-24!39;UBERON:0001890!4.98e-24!39;UBERON:0006240!4.98e-24!39;UBERON:0002791!1.61e-21!29;UBERON:0003528!1.61e-21!29;UBERON:0001893!1.61e-21!29;UBERON:0007811!1.21e-20!86;UBERON:0000153!2.59e-17!94;UBERON:0000956!5.21e-15!21;UBERON:0001869!5.21e-15!21;UBERON:0000203!5.21e-15!21;UBERON:0002619!4.65e-12!17;UBERON:0002021!5.13e-11!10;UBERON:0000411!5.13e-11!10;UBERON:0001950!5.13e-11!10;UBERON:0003076!1.00e-07!12;UBERON:0003057!1.00e-07!12;UBERON:0000970!1.02e-07!9;UBERON:0000019!1.02e-07!9;UBERON:0000047!1.02e-07!9;UBERON:0004088!1.02e-07!9;UBERON:0002104!1.02e-07!9;UBERON:0001456!1.02e-07!9;UBERON:0003072!1.02e-07!9;UBERON:0003071!1.02e-07!9;UBERON:0004128!1.02e-07!9;UBERON:0002420!1.10e-07!8;UBERON:0007245!1.10e-07!8;UBERON:0010009!1.10e-07!8;UBERON:0010011!1.10e-07!8;UBERON:0000454!1.10e-07!8;UBERON:0002298!5.33e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.74e-41,64;UBERON:0003075,2.74e-41,64;UBERON:0007284,2.74e-41,64;UBERON:0000073,9.82e-38,54;UBERON:0001049,5.84e-35,52;UBERON:0005068,5.84e-35,52;UBERON:0006241,5.84e-35,52;UBERON:0007135,5.84e-35,52;UBERON:0003056,2.95e-34,49;UBERON:0010371,3.32e-34,73;UBERON:0004121,1.54e-32,95;UBERON:0000924,1.54e-32,95;UBERON:0006601,1.54e-32,95;UBERON:0001017,1.34e-31,73;UBERON:0002020,1.65e-31,34;UBERON:0001016,2.44e-30,75;UBERON:0000955,7.27e-30,47;UBERON:0006238,7.27e-30,47;UBERON:0002616,9.82e-29,46;UBERON:0003528,1.80e-26,29;UBERON:0002791,1.80e-26,29;UBERON:0001893,1.80e-26,29;UBERON:0003080,1.13e-25,40;UBERON:0002780,2.07e-24,39;UBERON:0001890,2.07e-24,39;UBERON:0006240,2.07e-24,39;UBERON:0010314,7.46e-24,92;UBERON:0000956,2.01e-18,21;UBERON:0001869,2.01e-18,21;UBERON:0000203,2.01e-18,21;UBERON:0002619,8.85e-15,17;UBERON:0002021,3.27e-13,10;UBERON:0000411,3.27e-13,10;UBERON:0001950,3.27e-13,10;UBERON:0003076,2.03e-09,12;UBERON:0003057,2.03e-09,12;UBERON:0000970,3.74e-09,9;UBERON:0000019,3.74e-09,9;UBERON:0000047,3.74e-09,9;UBERON:0010312,3.74e-09,9;UBERON:0004088,3.74e-09,9;UBERON:0002104,3.74e-09,9;UBERON:0001456,3.74e-09,9;UBERON:0003072,3.74e-09,9;UBERON:0004128,3.74e-09,9;UBERON:0003071,3.74e-09,9;UBERON:0002420,4.10e-09,8;UBERON:0007245,4.10e-09,8;UBERON:0010009,4.10e-09,8;UBERON:0010011,4.10e-09,8;UBERON:0000454,4.10e-09,8;UBERON:0000025,6.92e-09,114;UBERON:0004111,1.50e-07,122;UBERON:0001444,4.08e-07,11;UBERON:0002240,4.18e-07,6;UBERON:0005174,4.18e-07,6;UBERON:0001137,4.18e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73893940374735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,4.7609188134483,1.26766280701236,0,0,0,0,0,0.299600110518405,0,3.11068836925433,2.97013064329719,2.52389953621658,3.71346279724945,6.40518768759679,3.91970557487853,1.72521847832825,2.75765635983006,36.3382407297983,27.4527776883154,35.6367157154485,2.37395317914349,5.48925861614458,2.6045668527838,16.4717969410815,30.9519435517424,29.6428600687012,8.54422897873636,12.6710795911202,4.47358669980721,0,0.0755715601067855,0,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.7500090411593,60.3206515622751,0,0,0,0,39.0953568846587,27.9075367719362,3.76963056338593,41.3701882057618,26.338692105024,43.2199132683885,33.5839414550258,0,0,0,2.52530227063769,2.08192708740326,2.75882525320168,6.48223667299257,6.17889753126432,6.19132142277083,6.14945857367279,5.15359485078509,4.9153640440413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8007409987223,3.60166143327496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9082731584862,19.2227166011213,0,0,0,0,0,0,0,0,0,0,0,21.8498495166829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7874732978144,1.44048875225048,0.129358683782755,0.428674070063185,0,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0,0,0,0,14.8340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6368108063632,24.3972375348804,27.498984645091,23.3720327987415,32.8839609489908,31.7265436903674,47.9265975164582,33.3237690385923,40.3296743995942,24.8524949640874,0.415149390336707,1.19707462020309,1.70733605754134,0.243106717068294,0.419226325255965,0.735374033800057,1.77797382241292,0.824140228955577,0.962757628775446,0.252697211763798,2.02783439912192,1.69763707247469,1.591905626988,1.21647789569252,1.14870937911227,1.42888107384922,0.347652977834566,0.77163688185482,1.23625770240992,1.32479028120958,2.05721551431249,1.24233064311536,0.476872379894642,2.0348498328526,2.07040636913727,1.26921911837515,1.46342378298218,0.263069711437843,0.407412341537585,1.68342681497322,0.830445126869219,0.985044823755635,0,0.77468420592983,0.964533054905707,1.99848462350357,0.467863216890817,1.07435527024149,0.765153328275374,0.441182838239031,0|short_description=p8@Gpm6a}} | ||
|EntrezGene=234267 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P35802,Q542P2 | |||
|association_with_transcript=485bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end | |||
|description=CAGE_peak_8_at_Gpm6a_5end | |||
|id=chr8:56040566..56040584,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.46e-18!23;CL:0000337!2.46e-18!23;CL:0000540!2.49e-10!33;CL:0000047!2.49e-10!33;CL:0000031!2.49e-10!33;CL:0000404!2.49e-10!33;CL:0000393!1.28e-07!39;CL:0000211!1.28e-07!39;CL:0002319!2.01e-07!43;CL:0000221!4.34e-07!44;CL:0000133!4.34e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.08e-22,23;CL:0000337,3.08e-22,23;CL:0000540,2.49e-13,33;CL:0000047,2.49e-13,33;CL:0000031,2.49e-13,33;CL:0000404,2.49e-13,33;CL:0000393,3.02e-10,39;CL:0000211,3.02e-10,39;CL:0002319,1.07e-08,43;CL:0000221,2.34e-08,44;CL:0000133,2.34e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.89e-35!63;UBERON:0001049!1.53e-32!52;UBERON:0005068!1.53e-32!52;UBERON:0006241!1.53e-32!52;UBERON:0007135!1.53e-32!52;UBERON:0003056!2.83e-32!49;UBERON:0002346!1.31e-31!71;UBERON:0003075!1.31e-31!71;UBERON:0007284!1.31e-31!71;UBERON:0000955!1.77e-31!50;UBERON:0006238!1.77e-31!50;UBERON:0002616!1.68e-30!49;UBERON:0001017!7.75e-29!73;UBERON:0005743!7.75e-29!73;UBERON:0000073!1.62e-28!75;UBERON:0001016!1.62e-28!75;UBERON:0004121!1.32e-25!102;UBERON:0000924!1.32e-25!102;UBERON:0006601!1.32e-25!102;UBERON:0002020!1.35e-25!34;UBERON:0003080!4.18e-25!40;UBERON:0002780!4.98e-24!39;UBERON:0001890!4.98e-24!39;UBERON:0006240!4.98e-24!39;UBERON:0002791!1.61e-21!29;UBERON:0003528!1.61e-21!29;UBERON:0001893!1.61e-21!29;UBERON:0007811!1.21e-20!86;UBERON:0000153!2.59e-17!94;UBERON:0000956!5.21e-15!21;UBERON:0001869!5.21e-15!21;UBERON:0000203!5.21e-15!21;UBERON:0002619!4.65e-12!17;UBERON:0002021!5.13e-11!10;UBERON:0000411!5.13e-11!10;UBERON:0001950!5.13e-11!10;UBERON:0003076!1.00e-07!12;UBERON:0003057!1.00e-07!12;UBERON:0000970!1.02e-07!9;UBERON:0000019!1.02e-07!9;UBERON:0000047!1.02e-07!9;UBERON:0004088!1.02e-07!9;UBERON:0002104!1.02e-07!9;UBERON:0001456!1.02e-07!9;UBERON:0003072!1.02e-07!9;UBERON:0003071!1.02e-07!9;UBERON:0004128!1.02e-07!9;UBERON:0002420!1.10e-07!8;UBERON:0007245!1.10e-07!8;UBERON:0010009!1.10e-07!8;UBERON:0010011!1.10e-07!8;UBERON:0000454!1.10e-07!8;UBERON:0002298!5.33e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.74e-41,64;UBERON:0003075,2.74e-41,64;UBERON:0007284,2.74e-41,64;UBERON:0000073,9.82e-38,54;UBERON:0001049,5.84e-35,52;UBERON:0005068,5.84e-35,52;UBERON:0006241,5.84e-35,52;UBERON:0007135,5.84e-35,52;UBERON:0003056,2.95e-34,49;UBERON:0010371,3.32e-34,73;UBERON:0004121,1.54e-32,95;UBERON:0000924,1.54e-32,95;UBERON:0006601,1.54e-32,95;UBERON:0001017,1.34e-31,73;UBERON:0002020,1.65e-31,34;UBERON:0001016,2.44e-30,75;UBERON:0000955,7.27e-30,47;UBERON:0006238,7.27e-30,47;UBERON:0002616,9.82e-29,46;UBERON:0003528,1.80e-26,29;UBERON:0002791,1.80e-26,29;UBERON:0001893,1.80e-26,29;UBERON:0003080,1.13e-25,40;UBERON:0002780,2.07e-24,39;UBERON:0001890,2.07e-24,39;UBERON:0006240,2.07e-24,39;UBERON:0010314,7.46e-24,92;UBERON:0000956,2.01e-18,21;UBERON:0001869,2.01e-18,21;UBERON:0000203,2.01e-18,21;UBERON:0002619,8.85e-15,17;UBERON:0002021,3.27e-13,10;UBERON:0000411,3.27e-13,10;UBERON:0001950,3.27e-13,10;UBERON:0003076,2.03e-09,12;UBERON:0003057,2.03e-09,12;UBERON:0000970,3.74e-09,9;UBERON:0000019,3.74e-09,9;UBERON:0000047,3.74e-09,9;UBERON:0010312,3.74e-09,9;UBERON:0004088,3.74e-09,9;UBERON:0002104,3.74e-09,9;UBERON:0001456,3.74e-09,9;UBERON:0003072,3.74e-09,9;UBERON:0004128,3.74e-09,9;UBERON:0003071,3.74e-09,9;UBERON:0002420,4.10e-09,8;UBERON:0007245,4.10e-09,8;UBERON:0010009,4.10e-09,8;UBERON:0010011,4.10e-09,8;UBERON:0000454,4.10e-09,8;UBERON:0000025,6.92e-09,114;UBERON:0004111,1.50e-07,122;UBERON:0001444,4.08e-07,11;UBERON:0002240,4.18e-07,6;UBERON:0005174,4.18e-07,6;UBERON:0001137,4.18e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73893940374735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,4.7609188134483,1.26766280701236,0,0,0,0,0,0.299600110518405,0,3.11068836925433,2.97013064329719,2.52389953621658,3.71346279724945,6.40518768759679,3.91970557487853,1.72521847832825,2.75765635983006,36.3382407297983,27.4527776883154,35.6367157154485,2.37395317914349,5.48925861614458,2.6045668527838,16.4717969410815,30.9519435517424,29.6428600687012,8.54422897873636,12.6710795911202,4.47358669980721,0,0.0755715601067855,0,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.7500090411593,60.3206515622751,0,0,0,0,39.0953568846587,27.9075367719362,3.76963056338593,41.3701882057618,26.338692105024,43.2199132683885,33.5839414550258,0,0,0,2.52530227063769,2.08192708740326,2.75882525320168,6.48223667299257,6.17889753126432,6.19132142277083,6.14945857367279,5.15359485078509,4.9153640440413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8007409987223,3.60166143327496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9082731584862,19.2227166011213,0,0,0,0,0,0,0,0,0,0,0,21.8498495166829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7874732978144,1.44048875225048,0.129358683782755,0.428674070063185,0,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0,0,0,0,14.8340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6368108063632,24.3972375348804,27.498984645091,23.3720327987415,32.8839609489908,31.7265436903674,47.9265975164582,33.3237690385923,40.3296743995942,24.8524949640874,0.415149390336707,1.19707462020309,1.70733605754134,0.243106717068294,0.419226325255965,0.735374033800057,1.77797382241292,0.824140228955577,0.962757628775446,0.252697211763798,2.02783439912192,1.69763707247469,1.591905626988,1.21647789569252,1.14870937911227,1.42888107384922,0.347652977834566,0.77163688185482,1.23625770240992,1.32479028120958,2.05721551431249,1.24233064311536,0.476872379894642,2.0348498328526,2.07040636913727,1.26921911837515,1.46342378298218,0.263069711437843,0.407412341537585,1.68342681497322,0.830445126869219,0.985044823755635,0,0.77468420592983,0.964533054905707,1.99848462350357,0.467863216890817,1.07435527024149,0.765153328275374,0.441182838239031,0 | |||
|short_description=p8@Gpm6a | |||
}} |
Revision as of 15:47, 14 September 2013
Short description: | p8@Gpm6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Gpm6a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 485bp_to_ENSMUST00000033915, NM_001253756, NM_153581, uc009lsl.2_5end |
EntrezGene: | Gpm6a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.08e-22 | 23 |
neuroblast (sensu Vertebrata) | 3.08e-22 | 23 |
neuron | 2.49e-13 | 33 |
neuronal stem cell | 2.49e-13 | 33 |
neuroblast | 2.49e-13 | 33 |
electrically signaling cell | 2.49e-13 | 33 |
electrically responsive cell | 3.02e-10 | 39 |
electrically active cell | 3.02e-10 | 39 |
neural cell | 1.07e-08 | 43 |
ectodermal cell | 2.34e-08 | 44 |
neurectodermal cell | 2.34e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.