FFCP PHASE1:Mm9::chr7:134194033..134194045,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=499|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:134194033..134194045,+|id=chr7:134194033..134194045,+|ontology_enrichment_celltype=CL:0000473!1.04e-11!3;CL:0000627!1.04e-11!3;CL:0000682!1.04e-11!3;CL:0000239!3.10e-10!6;CL:0000677!3.10e-10!6;CL:0000212!3.10e-10!6;CL:0000584!3.10e-10!6;CL:0002563!5.53e-10!9;CL:0002251!5.53e-10!9;CL:0000075!8.79e-09!7;CL:0000066!2.90e-08!25|ontology_enrichment_celltype_v019_2=CL:0000682,1.86e-12,3;CL:0000239,7.48e-07,6;CL:0000677,7.48e-07,6;CL:0000584,7.48e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.11e-28!15;UBERON:0000160!7.36e-27!43;UBERON:0001242!6.65e-22!13;UBERON:0000060!6.65e-22!13;UBERON:0001262!6.65e-22!13;UBERON:0004786!6.65e-22!13;UBERON:0005409!8.43e-21!59;UBERON:0002108!2.62e-17!16;UBERON:0004923!6.61e-17!24;UBERON:0000331!2.95e-12!3;UBERON:0002116!2.95e-12!3;UBERON:0001204!2.95e-12!3;UBERON:0001168!2.95e-12!3;UBERON:0001264!2.51e-10!12;UBERON:0003922!2.51e-10!12;UBERON:0002114!2.51e-10!12;UBERON:0003923!2.51e-10!12;UBERON:0003924!2.51e-10!12;UBERON:0003921!2.51e-10!12;UBERON:0003350!5.53e-10!9;UBERON:0004808!5.53e-10!9;UBERON:0001277!5.53e-10!9;UBERON:0001007!8.11e-10!128;UBERON:0001555!8.11e-10!128;UBERON:0007026!8.11e-10!128;UBERON:0004119!1.33e-09!130;UBERON:0000925!1.33e-09!130;UBERON:0006595!1.33e-09!130;UBERON:0001045!1.73e-09!13;UBERON:0001962!1.95e-08!2;UBERON:0001961!1.95e-08!2;UBERON:0001744!1.95e-08!2;UBERON:0000485!4.02e-08!11;UBERON:0004921!9.18e-08!126;UBERON:0004185!9.18e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.38e-21,15;UBERON:0001242,3.38e-17,13;UBERON:0001262,3.38e-17,13;UBERON:0004786,3.38e-17,13;UBERON:0004923,3.62e-13,24;UBERON:0000331,4.20e-13,3;UBERON:0002116,4.20e-13,3;UBERON:0001204,4.20e-13,3;UBERON:0001168,4.20e-13,3;UBERON:0002108,4.61e-10,4;UBERON:0000160,2.93e-07,31|phase1_expression=0,0.697950815278722,0.909998478779072,0,0,5.54001597309236,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,0.91763712426868,0.57423196411502,2.15380998079537,1.29282739611533,6.65081968097309,4.03248207615889,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.614870295887855,0,0.363533729477506,0.712994756769443,0,2.10837217149998,3.09406629744561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:134194033..134194045,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=499 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:134194033..134194045,+ | |||
|id=chr7:134194033..134194045,+ | |||
|ontology_enrichment_celltype=CL:0000473!1.04e-11!3;CL:0000627!1.04e-11!3;CL:0000682!1.04e-11!3;CL:0000239!3.10e-10!6;CL:0000677!3.10e-10!6;CL:0000212!3.10e-10!6;CL:0000584!3.10e-10!6;CL:0002563!5.53e-10!9;CL:0002251!5.53e-10!9;CL:0000075!8.79e-09!7;CL:0000066!2.90e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.86e-12,3;CL:0000239,7.48e-07,6;CL:0000677,7.48e-07,6;CL:0000584,7.48e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.11e-28!15;UBERON:0000160!7.36e-27!43;UBERON:0001242!6.65e-22!13;UBERON:0000060!6.65e-22!13;UBERON:0001262!6.65e-22!13;UBERON:0004786!6.65e-22!13;UBERON:0005409!8.43e-21!59;UBERON:0002108!2.62e-17!16;UBERON:0004923!6.61e-17!24;UBERON:0000331!2.95e-12!3;UBERON:0002116!2.95e-12!3;UBERON:0001204!2.95e-12!3;UBERON:0001168!2.95e-12!3;UBERON:0001264!2.51e-10!12;UBERON:0003922!2.51e-10!12;UBERON:0002114!2.51e-10!12;UBERON:0003923!2.51e-10!12;UBERON:0003924!2.51e-10!12;UBERON:0003921!2.51e-10!12;UBERON:0003350!5.53e-10!9;UBERON:0004808!5.53e-10!9;UBERON:0001277!5.53e-10!9;UBERON:0001007!8.11e-10!128;UBERON:0001555!8.11e-10!128;UBERON:0007026!8.11e-10!128;UBERON:0004119!1.33e-09!130;UBERON:0000925!1.33e-09!130;UBERON:0006595!1.33e-09!130;UBERON:0001045!1.73e-09!13;UBERON:0001962!1.95e-08!2;UBERON:0001961!1.95e-08!2;UBERON:0001744!1.95e-08!2;UBERON:0000485!4.02e-08!11;UBERON:0004921!9.18e-08!126;UBERON:0004185!9.18e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.38e-21,15;UBERON:0001242,3.38e-17,13;UBERON:0001262,3.38e-17,13;UBERON:0004786,3.38e-17,13;UBERON:0004923,3.62e-13,24;UBERON:0000331,4.20e-13,3;UBERON:0002116,4.20e-13,3;UBERON:0001204,4.20e-13,3;UBERON:0001168,4.20e-13,3;UBERON:0002108,4.61e-10,4;UBERON:0000160,2.93e-07,31 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,0,0,5.54001597309236,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,0.91763712426868,0.57423196411502,2.15380998079537,1.29282739611533,6.65081968097309,4.03248207615889,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.614870295887855,0,0.363533729477506,0.712994756769443,0,2.10837217149998,3.09406629744561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:134194033..134194045,+ | |||
}} |
Revision as of 11:53, 14 September 2013
Short description: | p@chr7:134194033..134194045, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:134194033..134194045, + |
Coexpression cluster: | MCL_coexpression_mm9:499 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.86e-12 | 3 |
brush border epithelial cell | 7.48e-07 | 6 |
gut absorptive cell | 7.48e-07 | 6 |
enterocyte | 7.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.38e-21 | 15 |
intestinal mucosa | 3.38e-17 | 13 |
wall of intestine | 3.38e-17 | 13 |
gastrointestinal system mucosa | 3.38e-17 | 13 |
organ component layer | 3.62e-13 | 24 |
ileal mucosa | 4.20e-13 | 3 |
ileum | 4.20e-13 | 3 |
mucosa of small intestine | 4.20e-13 | 3 |
wall of small intestine | 4.20e-13 | 3 |
small intestine | 4.61e-10 | 4 |
intestine | 2.93e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.