FFCP PHASE1:Mm9::chr17:48439797..48439804,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=328833|HGNC=|MCL_coexpression_id=522|UniProt=|association_with_transcript=117bp_to_ENSMUST00000166699_5end|description=CAGE_peak_9_at_Treml2_5end|id=chr17:48439797..48439804,+|ontology_enrichment_celltype=CL:0000988!4.32e-14!32;CL:0002032!4.32e-14!32;CL:0000037!4.32e-14!32;CL:0000566!4.32e-14!32;CL:0000837!4.32e-14!32;CL:0000049!2.88e-09!19;CL:0002031!5.74e-09!25;CL:0002320!1.15e-08!46;CL:0000134!1.15e-08!46|ontology_enrichment_celltype_v019_2=CL:0000988,1.87e-19,32;CL:0002032,1.87e-19,32;CL:0000037,1.87e-19,32;CL:0000837,1.87e-19,32;CL:0000049,2.87e-15,19;CL:0002320,1.39e-12,46;CL:0000134,1.39e-12,46;CL:0000034,1.68e-10,97;CL:0000219,2.93e-10,54;CL:0000763,2.97e-09,16;CL:0002031,6.01e-09,25;CL:0000723,8.16e-08,91;CL:0000048,8.16e-08,91;CL:0000557,1.00e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,6.18e-11,3;DOID:4045,6.18e-11,3|ontology_enrichment_uberon=UBERON:0002193!2.98e-21!48;UBERON:0002390!1.97e-20!45;UBERON:0003061!1.97e-20!45;UBERON:0002405!5.52e-15!70;UBERON:0004177!3.08e-13!29;UBERON:0003081!5.51e-12!88;UBERON:0002370!1.05e-08!23;UBERON:0000974!1.05e-08!23;UBERON:0004807!1.05e-08!23;UBERON:0005058!1.05e-08!23;UBERON:0003351!1.05e-08!23;UBERON:0009113!1.05e-08!23;UBERON:0003295!1.05e-08!23;UBERON:0009722!1.05e-08!23;UBERON:0005562!1.05e-08!23;UBERON:0007690!1.05e-08!23;UBERON:0002384!1.15e-08!46;UBERON:0001474!2.88e-08!22;UBERON:0004765!2.88e-08!22;UBERON:0001434!2.88e-08!22;UBERON:0006562!3.67e-08!24;UBERON:0003408!3.67e-08!24;UBERON:0001557!3.67e-08!24;UBERON:0001042!3.67e-08!24;UBERON:0008814!3.67e-08!24;UBERON:0009145!3.67e-08!24;UBERON:0002371!6.48e-08!16;UBERON:0005057!7.84e-08!51;UBERON:0002204!1.12e-07!32;UBERON:0000072!8.64e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.39e-12,46;UBERON:0002371,2.97e-09,16;UBERON:0002390,5.15e-09,45;UBERON:0003061,5.15e-09,45;UBERON:0002204,1.23e-08,32;UBERON:0002193,2.70e-08,48;UBERON:0002405,2.70e-08,48|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0,0,0,1.02720437958723,0.174840804837995,0.666219523631325,0.202475267389826,0,3.15462165358238,2.05671650408608,2.12194825899015,0,2.08510997521859,2.35079810225042,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,3.906676722619,2.09409497589519,1.17646297606203,1.36609096991689,1.94204141212461,0,0,0,0,0,0,0,0,0,2.68452169692378,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.323533699894818,0.662524555381181,0,0,0,0,0,1.7972268675888,2.39961092397363,1.14363204365758,0,0,0,0,0,0.20778804455956,0,0,0.870848794270651,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,2.1066395619397,1.80143534980301,3.12579849335152,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0.449724224769707,0,0.241177159752417,0.25462585178142,0,0.648540907100142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,3.01582567878545,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.619160603889667,0.370389054739423,0.376736914009382,0.956859594047176,1.14389086603261,2.20971958992012,2.51912614182584,1.79659965945751,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,1.02710957164827,1.03936658382236,0.179026695667481,0.39736270956253,1.20195449519969,0.738447635872886,0.908698049533329,0.533447646584999,0.504130925684203,1.36441033035653,0.192423683280659,0.701261413089414,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.476872379894642,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p9@Treml2}} | ||
|EntrezGene=328833 | |||
|HGNC= | |||
|MCL_coexpression_id=522 | |||
|UniProt= | |||
|association_with_transcript=117bp_to_ENSMUST00000166699_5end | |||
|description=CAGE_peak_9_at_Treml2_5end | |||
|id=chr17:48439797..48439804,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.32e-14!32;CL:0002032!4.32e-14!32;CL:0000037!4.32e-14!32;CL:0000566!4.32e-14!32;CL:0000837!4.32e-14!32;CL:0000049!2.88e-09!19;CL:0002031!5.74e-09!25;CL:0002320!1.15e-08!46;CL:0000134!1.15e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.87e-19,32;CL:0002032,1.87e-19,32;CL:0000037,1.87e-19,32;CL:0000837,1.87e-19,32;CL:0000049,2.87e-15,19;CL:0002320,1.39e-12,46;CL:0000134,1.39e-12,46;CL:0000034,1.68e-10,97;CL:0000219,2.93e-10,54;CL:0000763,2.97e-09,16;CL:0002031,6.01e-09,25;CL:0000723,8.16e-08,91;CL:0000048,8.16e-08,91;CL:0000557,1.00e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.18e-11,3;DOID:4045,6.18e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.98e-21!48;UBERON:0002390!1.97e-20!45;UBERON:0003061!1.97e-20!45;UBERON:0002405!5.52e-15!70;UBERON:0004177!3.08e-13!29;UBERON:0003081!5.51e-12!88;UBERON:0002370!1.05e-08!23;UBERON:0000974!1.05e-08!23;UBERON:0004807!1.05e-08!23;UBERON:0005058!1.05e-08!23;UBERON:0003351!1.05e-08!23;UBERON:0009113!1.05e-08!23;UBERON:0003295!1.05e-08!23;UBERON:0009722!1.05e-08!23;UBERON:0005562!1.05e-08!23;UBERON:0007690!1.05e-08!23;UBERON:0002384!1.15e-08!46;UBERON:0001474!2.88e-08!22;UBERON:0004765!2.88e-08!22;UBERON:0001434!2.88e-08!22;UBERON:0006562!3.67e-08!24;UBERON:0003408!3.67e-08!24;UBERON:0001557!3.67e-08!24;UBERON:0001042!3.67e-08!24;UBERON:0008814!3.67e-08!24;UBERON:0009145!3.67e-08!24;UBERON:0002371!6.48e-08!16;UBERON:0005057!7.84e-08!51;UBERON:0002204!1.12e-07!32;UBERON:0000072!8.64e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.39e-12,46;UBERON:0002371,2.97e-09,16;UBERON:0002390,5.15e-09,45;UBERON:0003061,5.15e-09,45;UBERON:0002204,1.23e-08,32;UBERON:0002193,2.70e-08,48;UBERON:0002405,2.70e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0,0,0,1.02720437958723,0.174840804837995,0.666219523631325,0.202475267389826,0,3.15462165358238,2.05671650408608,2.12194825899015,0,2.08510997521859,2.35079810225042,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,3.906676722619,2.09409497589519,1.17646297606203,1.36609096991689,1.94204141212461,0,0,0,0,0,0,0,0,0,2.68452169692378,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.323533699894818,0.662524555381181,0,0,0,0,0,1.7972268675888,2.39961092397363,1.14363204365758,0,0,0,0,0,0.20778804455956,0,0,0.870848794270651,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,2.1066395619397,1.80143534980301,3.12579849335152,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0.449724224769707,0,0.241177159752417,0.25462585178142,0,0.648540907100142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,3.01582567878545,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.619160603889667,0.370389054739423,0.376736914009382,0.956859594047176,1.14389086603261,2.20971958992012,2.51912614182584,1.79659965945751,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,1.02710957164827,1.03936658382236,0.179026695667481,0.39736270956253,1.20195449519969,0.738447635872886,0.908698049533329,0.533447646584999,0.504130925684203,1.36441033035653,0.192423683280659,0.701261413089414,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.476872379894642,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p9@Treml2 | |||
}} |
Revision as of 14:47, 13 September 2013
Short description: | p9@Treml2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Treml2_5end |
Coexpression cluster: | MCL_coexpression_mm9:522 |
Association with transcript: | 117bp_to_ENSMUST00000166699_5end |
EntrezGene: | Treml2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.87e-19 | 32 |
hematopoietic oligopotent progenitor cell | 1.87e-19 | 32 |
hematopoietic stem cell | 1.87e-19 | 32 |
hematopoietic multipotent progenitor cell | 1.87e-19 | 32 |
common myeloid progenitor | 2.87e-15 | 19 |
connective tissue cell | 1.39e-12 | 46 |
mesenchymal cell | 1.39e-12 | 46 |
stem cell | 1.68e-10 | 97 |
motile cell | 2.93e-10 | 54 |
myeloid cell | 2.97e-09 | 16 |
hematopoietic lineage restricted progenitor cell | 6.01e-09 | 25 |
somatic stem cell | 8.16e-08 | 91 |
multi fate stem cell | 8.16e-08 | 91 |
granulocyte monocyte progenitor cell | 1.00e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.39e-12 | 46 |
bone marrow | 2.97e-09 | 16 |
hematopoietic system | 5.15e-09 | 45 |
blood island | 5.15e-09 | 45 |
musculoskeletal system | 1.23e-08 | 32 |
hemolymphoid system | 2.70e-08 | 48 |
immune system | 2.70e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.18e-11 | 3 |
muscle cancer | 6.18e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.