FFCP PHASE1:Mm9::chr16:32877695..32877721,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100502698|HGNC=|UniProt=D3Z7B1,Q80U62|association_with_transcript=130bp_to_ENSMUST00000119810,ENSMUST00000171595,uc007yzn.1_5end|description=CAGE_peak_5_at_1700021K19Rik_5end|id=chr16:32877695..32877721,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!9.87e-11!114;UBERON:0004111!6.73e-10!122;UBERON:0000073!7.81e-10!75;UBERON:0001016!7.81e-10!75;UBERON:0001017!1.01e-09!73;UBERON:0005743!1.01e-09!73;UBERON:0000468!1.71e-08!333;UBERON:0004121!1.70e-07!102;UBERON:0000924!1.70e-07!102;UBERON:0006601!1.70e-07!102;UBERON:0001049!8.02e-07!52;UBERON:0005068!8.02e-07!52;UBERON:0006241!8.02e-07!52;UBERON:0007135!8.02e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.40e-09,114;UBERON:0001016,4.21e-08,75;UBERON:0001017,4.99e-08,73;UBERON:0004111,7.79e-08,122;UBERON:0004121,7.77e-07,95;UBERON:0000924,7.77e-07,95;UBERON:0006601,7.77e-07,95|phase1_expression=0.80074423552397,0,0,1.20985684522732,0.500895729946347,0,0,0.258246646883153,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,1.73504190947031,1.7824876368746,1.69755860719212,0.935476191661768,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0.577703239502549,0,0.612508068787107,2.09265815368454,0,0.523523743973798,0.588231488031014,0,1.94204141212461,1.38486499773135,1.52065396829272,1.65192076945513,1.56478268869608,1.30815093828268,1.5378032791413,0.972149495371417,0.699932108126813,2.87505128729943,0.838913030288682,0.725362142011344,0.336093799142464,0.771778308107841,2.0057340795713,0.515672092277442,1.01158230429799,3.70293685490423,4.43681982454325,0,0,0.899899717281399,1.97773272513395,0,1.19840044207362,2.30530983192933,0.725827286159344,0.675029691658453,0.630974884054146,1.71390590642282,1.54607978666129,0.734944795289724,1.24599112323707,1.83843757322004,2.20231761998777,1.65993539510744,2.91852413186863,1.84640802822271,2.01272815925301,2.08365348222704,2.51264699101243,2.8138130501584,3.66715794664344,2.94628585473668,2.56269025438385,1.1183966749518,0.530083353332288,2.87171928405785,1.44932244350839,1.72084775396277,0,0,3.24888208723835,2.24013443548668,1.40444420131752,1.36344258062446,0.259786004602869,1.41335829804136,0.985903938436763,3.84979432242953,2.54805239706646,0,0.649473123033642,0.506719730950197,0,0.22836775943812,3.88406825470758,0.445326417194474,0.520455980298408,0.913396434936424,0.691846491768175,0.753613202763113,0.117588707135705,0.251333182659351,2.22475470960936,2.02439099687876,0.884610551949874,1.61766849947409,1.10420759230197,0.484875253135222,1.86391761218122,3.80615036115011,2.51336048176146,1.53274233125155,0.239630249011841,0,0.127070227073065,3.44518470631092,2.28750301409313,0.879580464790051,1.73824320192276,1.53429274398198,4.1557608911912,2.27137768294861,0.509196819251581,0.870848794270651,1.51633655060205,1.05220927943237,0.910843100738926,0.919608417733892,0.360124259610698,1.20563854268572,1.49680298132921,1.66547836370305,1.87403449119458,0.258703370739016,0.215567992932842,1.89106080167819,1.75951124163949,0.876782929710299,1.66828349535359,2.089512999133,0.823128545631774,0.199034266818493,0,0.257347907114715,0.284163499395593,1.24275463521301,2.34526059981096,1.98068267607116,1.65721314909647,3.34499193970586,1.69693824176116,2.55787339225449,3.75582761959467,2.33530684734339,1.48103864922132,1.31333971263276,2.10778904819225,3.36259971078264,2.85415149878366,2.14730270016595,2.10289948564127,1.13195073617213,2.97376904685418,2.64450566663544,0.639864751605702,0.232236671860439,0.644337306610467,1.81515172161008,0.667134131534611,1.33157938278791,3.79623249235609,0.494096864172033,1.00534083520108,1.79060824837036,2.14460495831032,2.69645822596266,1.08069024937347,1.7922714592893,0.189667900953082,0.799739588268102,1.1270773567308,1.01825663922657,1.16371492300575,0.841629838683823,1.83385957660346,2.06654207171443,2.35498091762062,1.72756029490521,1.48226313543574,0.500535317148282,0.393117990226406,0.449724224769707,0.405720242777006,0.964708639009667,1.52775511068852,1.15078454980324,0.162135226775035,0,1.43768206527355,1.86070473834252,0.936113019343682,3.28352541331245,1.97337154874103,1.4473305640901,1.10851914099963,0.757965647081939,1.14075483509418,0.678980343100753,1.17345124144251,1.67506257441816,2.14239276797412,0.585400943573396,1.26108115284953,1.32878813789265,1.75400245523236,2.13022309130459,1.55416483679306,1.3018415272336,0,0,2.45882136509518,2.20749397043786,4.65596710964597,3.39913891117389,0.327869890753351,1.00988370881749,0.631016438832513,0.390438744296638,1.72338718186239,0.955875191810208,1.78238939265915,2.54768877709949,3.64329631507405,1.16902343164525,1.58115111178609,1.60660658210904,1.56134093729095,1.24645922567079,0.488660878060728,0.989820737835213,1.32745138339963,1.21390318077491,0.302323556964751,1.32023555829129,1.77181135728464,0.922305443831782,1.03371317267288,1.81766864738753,2.13898427030833,1.2641470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| ||
|EntrezGene=100502698 | |||
|HGNC= | |||
|UniProt=D3Z7B1,Q80U62 | |||
|association_with_transcript=130bp_to_ENSMUST00000119810,ENSMUST00000171595,uc007yzn.1_5end | |||
|description=CAGE_peak_5_at_1700021K19Rik_5end | |||
|id=chr16:32877695..32877721,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!9.87e-11!114;UBERON:0004111!6.73e-10!122;UBERON:0000073!7.81e-10!75;UBERON:0001016!7.81e-10!75;UBERON:0001017!1.01e-09!73;UBERON:0005743!1.01e-09!73;UBERON:0000468!1.71e-08!333;UBERON:0004121!1.70e-07!102;UBERON:0000924!1.70e-07!102;UBERON:0006601!1.70e-07!102;UBERON:0001049!8.02e-07!52;UBERON:0005068!8.02e-07!52;UBERON:0006241!8.02e-07!52;UBERON:0007135!8.02e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.40e-09,114;UBERON:0001016,4.21e-08,75;UBERON:0001017,4.99e-08,73;UBERON:0004111,7.79e-08,122;UBERON:0004121,7.77e-07,95;UBERON:0000924,7.77e-07,95;UBERON:0006601,7.77e-07,95 | |||
|phase1_expression=0.80074423552397,0,0,1.20985684522732,0.500895729946347,0,0,0.258246646883153,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,1.73504190947031,1.7824876368746,1.69755860719212,0.935476191661768,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0.577703239502549,0,0.612508068787107,2.09265815368454,0,0.523523743973798,0.588231488031014,0,1.94204141212461,1.38486499773135,1.52065396829272,1.65192076945513,1.56478268869608,1.30815093828268,1.5378032791413,0.972149495371417,0.699932108126813,2.87505128729943,0.838913030288682,0.725362142011344,0.336093799142464,0.771778308107841,2.0057340795713,0.515672092277442,1.01158230429799,3.70293685490423,4.43681982454325,0,0,0.899899717281399,1.97773272513395,0,1.19840044207362,2.30530983192933,0.725827286159344,0.675029691658453,0.630974884054146,1.71390590642282,1.54607978666129,0.734944795289724,1.24599112323707,1.83843757322004,2.20231761998777,1.65993539510744,2.91852413186863,1.84640802822271,2.01272815925301,2.08365348222704,2.51264699101243,2.8138130501584,3.66715794664344,2.94628585473668,2.56269025438385,1.1183966749518,0.530083353332288,2.87171928405785,1.44932244350839,1.72084775396277,0,0,3.24888208723835,2.24013443548668,1.40444420131752,1.36344258062446,0.259786004602869,1.41335829804136,0.985903938436763,3.84979432242953,2.54805239706646,0,0.649473123033642,0.506719730950197,0,0.22836775943812,3.88406825470758,0.445326417194474,0.520455980298408,0.913396434936424,0.691846491768175,0.753613202763113,0.117588707135705,0.251333182659351,2.22475470960936,2.02439099687876,0.884610551949874,1.61766849947409,1.10420759230197,0.484875253135222,1.86391761218122,3.80615036115011,2.51336048176146,1.53274233125155,0.239630249011841,0,0.127070227073065,3.44518470631092,2.28750301409313,0.879580464790051,1.73824320192276,1.53429274398198,4.1557608911912,2.27137768294861,0.509196819251581,0.870848794270651,1.51633655060205,1.05220927943237,0.910843100738926,0.919608417733892,0.360124259610698,1.20563854268572,1.49680298132921,1.66547836370305,1.87403449119458,0.258703370739016,0.215567992932842,1.89106080167819,1.75951124163949,0.876782929710299,1.66828349535359,2.089512999133,0.823128545631774,0.199034266818493,0,0.257347907114715,0.284163499395593,1.24275463521301,2.34526059981096,1.98068267607116,1.65721314909647,3.34499193970586,1.69693824176116,2.55787339225449,3.75582761959467,2.33530684734339,1.48103864922132,1.31333971263276,2.10778904819225,3.36259971078264,2.85415149878366,2.14730270016595,2.10289948564127,1.13195073617213,2.97376904685418,2.64450566663544,0.639864751605702,0.232236671860439,0.644337306610467,1.81515172161008,0.667134131534611,1.33157938278791,3.79623249235609,0.494096864172033,1.00534083520108,1.79060824837036,2.14460495831032,2.69645822596266,1.08069024937347,1.7922714592893,0.189667900953082,0.799739588268102,1.1270773567308,1.01825663922657,1.16371492300575,0.841629838683823,1.83385957660346,2.06654207171443,2.35498091762062,1.72756029490521,1.48226313543574,0.500535317148282,0.393117990226406,0.449724224769707,0.405720242777006,0.964708639009667,1.52775511068852,1.15078454980324,0.162135226775035,0,1.43768206527355,1.86070473834252,0.936113019343682,3.28352541331245,1.97337154874103,1.4473305640901,1.10851914099963,0.757965647081939,1.14075483509418,0.678980343100753,1.17345124144251,1.67506257441816,2.14239276797412,0.585400943573396,1.26108115284953,1.32878813789265,1.75400245523236,2.13022309130459,1.55416483679306,1.3018415272336,0,0,2.45882136509518,2.20749397043786,4.65596710964597,3.39913891117389,0.327869890753351,1.00988370881749,0.631016438832513,0.390438744296638,1.72338718186239,0.955875191810208,1.78238939265915,2.54768877709949,3.64329631507405,1.16902343164525,1.58115111178609,1.60660658210904,1.56134093729095,1.24645922567079,0.488660878060728,0.989820737835213,1.32745138339963,1.21390318077491,0.302323556964751,1.32023555829129,1.77181135728464,0.922305443831782,1.03371317267288,1.81766864738753,2.13898427030833,1.26414703174326,0,2.06271086496374,1.70219802876894,0.36012218806262,0.517434735131018,0.857348140126369,0.709360934569094,0.713475270408282,0.493647061806363,0.913394847343798,0,1.90648863777438,0.882113592219848,1.48397627647332,0.968786560175433,0.965006798850494,0.835606408021955,0.492422699235184,1.1659233465194,4.45020724825223,0.512612642393558,1.23832120777933,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0.138199973804424,0,1.10717597753397,0.813277868507395,0.216010681643603,0.209088296014469,0.87345025498471,0.404593039154462,0.578574190077352,0.26175594198403,0.777689839750757,0,1.12738587736838,1.19613236835183,0.496375471371293,0.583353565032143,0.516639293910924,0.337912250981556,1.5256441023948,0.651021924219751,1.46803082195995,0.724752362478018,1.15212002503146,0,0,0.410843828659309,0.389762468933385,0,0.596044064343795,0.360586348559907,0.147689527174577,0.302899349844443,0.304827226619999,0.302478555410522,0.487289403698762,0.288635524920988,0.350630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| |||
|short_description=p5@1700021K19Rik | |||
}} | |||
Revision as of 12:28, 13 September 2013
| Short description: | p5@1700021K19Rik |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_1700021K19Rik_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 130bp_to_ENSMUST00000119810, ENSMUST00000171595, uc007yzn.1_5end |
| EntrezGene: | 1700021K19Rik |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| tube | 3.40e-09 | 114 |
| nervous system | 4.21e-08 | 75 |
| central nervous system | 4.99e-08 | 73 |
| anatomical conduit | 7.79e-08 | 122 |
| ectoderm-derived structure | 7.77e-07 | 95 |
| ectoderm | 7.77e-07 | 95 |
| presumptive ectoderm | 7.77e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
