FFCP PHASE1:Mm9::chr17:34428763..34428773,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=48|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:34428763..34428773,+|id=chr17:34428763..34428773,+|ontology_enrichment_celltype=CL:0000553!1.86e-10!6;CL:0000556!1.86e-10!6;CL:0000988!5.02e-08!32;CL:0002032!5.02e-08!32;CL:0000037!5.02e-08!32;CL:0000566!5.02e-08!32;CL:0000837!5.02e-08!32;CL:0002031!1.04e-07!25;CL:0000414!2.02e-07!11;CL:0000063!5.28e-07!66;CL:0000050!8.76e-07!9|ontology_enrichment_celltype_v019_2=CL:0000553,4.72e-39,6;CL:0000556,4.72e-39,6;CL:0000050,2.65e-26,9;CL:0000839,1.97e-18,13;CL:0000945,3.44e-16,1;CL:0000236,3.44e-16,1;CL:0000826,3.44e-16,1;CL:0000763,4.24e-15,16;CL:0002031,4.64e-15,25;CL:0000049,8.22e-13,19;CL:0000988,7.17e-12,32;CL:0002032,7.17e-12,32;CL:0000037,7.17e-12,32;CL:0000837,7.17e-12,32;CL:0002320,2.22e-08,46;CL:0000134,2.22e-08,46;CL:0000219,3.45e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.27e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.24e-15,16;UBERON:0001474,3.83e-11,22;UBERON:0004765,3.83e-11,22;UBERON:0001434,3.83e-11,22;UBERON:0002384,2.22e-08,46;UBERON:0002204,8.04e-08,32|phase1_expression=0,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0,0,0.422366166455,0.70219357896598,0,0,0,0,0.999329285446988,1.61980213911861,0,10.567982539501,8.5010948835558,11.0341309467488,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0.577703239502549,0,0.408338712524738,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,37.5833037569329,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.341741761595705,0,0,0,0.27338845544205,0,1.01987057996313,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:34428763..34428773,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:34428763..34428773,+ | |||
|id=chr17:34428763..34428773,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.86e-10!6;CL:0000556!1.86e-10!6;CL:0000988!5.02e-08!32;CL:0002032!5.02e-08!32;CL:0000037!5.02e-08!32;CL:0000566!5.02e-08!32;CL:0000837!5.02e-08!32;CL:0002031!1.04e-07!25;CL:0000414!2.02e-07!11;CL:0000063!5.28e-07!66;CL:0000050!8.76e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.72e-39,6;CL:0000556,4.72e-39,6;CL:0000050,2.65e-26,9;CL:0000839,1.97e-18,13;CL:0000945,3.44e-16,1;CL:0000236,3.44e-16,1;CL:0000826,3.44e-16,1;CL:0000763,4.24e-15,16;CL:0002031,4.64e-15,25;CL:0000049,8.22e-13,19;CL:0000988,7.17e-12,32;CL:0002032,7.17e-12,32;CL:0000037,7.17e-12,32;CL:0000837,7.17e-12,32;CL:0002320,2.22e-08,46;CL:0000134,2.22e-08,46;CL:0000219,3.45e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.27e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.24e-15,16;UBERON:0001474,3.83e-11,22;UBERON:0004765,3.83e-11,22;UBERON:0001434,3.83e-11,22;UBERON:0002384,2.22e-08,46;UBERON:0002204,8.04e-08,32 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0,0,0.422366166455,0.70219357896598,0,0,0,0,0.999329285446988,1.61980213911861,0,10.567982539501,8.5010948835558,11.0341309467488,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0.577703239502549,0,0.408338712524738,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,37.5833037569329,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.341741761595705,0,0,0,0.27338845544205,0,1.01987057996313,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:34428763..34428773,+ | |||
}} |
Revision as of 14:13, 13 September 2013
Short description: | p@chr17:34428763..34428773, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:34428763..34428773, + |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.72e-39 | 6 |
megakaryocyte | 4.72e-39 | 6 |
megakaryocyte-erythroid progenitor cell | 2.65e-26 | 9 |
myeloid lineage restricted progenitor cell | 1.97e-18 | 13 |
lymphocyte of B lineage | 3.44e-16 | 1 |
B cell | 3.44e-16 | 1 |
pro-B cell | 3.44e-16 | 1 |
myeloid cell | 4.24e-15 | 16 |
hematopoietic lineage restricted progenitor cell | 4.64e-15 | 25 |
common myeloid progenitor | 8.22e-13 | 19 |
hematopoietic cell | 7.17e-12 | 32 |
hematopoietic oligopotent progenitor cell | 7.17e-12 | 32 |
hematopoietic stem cell | 7.17e-12 | 32 |
hematopoietic multipotent progenitor cell | 7.17e-12 | 32 |
connective tissue cell | 2.22e-08 | 46 |
mesenchymal cell | 2.22e-08 | 46 |
motile cell | 3.45e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.24e-15 | 16 |
bone element | 3.83e-11 | 22 |
skeletal element | 3.83e-11 | 22 |
skeletal system | 3.83e-11 | 22 |
connective tissue | 2.22e-08 | 46 |
musculoskeletal system | 8.04e-08 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.