FFCP PHASE1:Mm9::chr19:46380462..46380471,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18034|HGNC=|MCL_coexpression_id=7|UniProt=E9Q1H6|association_with_transcript=-16bp_to_ENSMUST00000163266_5end|description=CAGE_peak_11_at_Nfkb2_5end|id=chr19:46380462..46380471,+|ontology_enrichment_celltype=CL:0000624!5.67e-12!8;CL:0000893!1.78e-11!6;CL:0002489!1.78e-11!6;CL:0000898!1.78e-11!6;CL:0000809!1.78e-11!6;CL:0000810!1.78e-11!6;CL:0000895!1.78e-11!6;CL:0000808!1.78e-11!6;CL:0000894!1.78e-11!6;CL:0000806!1.78e-11!6;CL:0000807!1.78e-11!6;CL:0000805!1.78e-11!6;CL:0002425!1.78e-11!6;CL:0002436!1.78e-11!6;CL:0002427!1.78e-11!6;CL:0002428!1.78e-11!6;CL:0002429!1.78e-11!6;CL:0002433!1.78e-11!6;CL:0002431!1.78e-11!6;CL:0002432!1.78e-11!6;CL:0002031!6.59e-11!25;CL:0000791!1.49e-10!9;CL:0000789!1.49e-10!9;CL:0002420!1.49e-10!9;CL:0002419!1.49e-10!9;CL:0000790!1.49e-10!9;CL:0000838!2.04e-10!12;CL:0000542!1.58e-09!13;CL:0000051!1.58e-09!13;CL:0000988!1.83e-09!32;CL:0002032!1.83e-09!32;CL:0000037!1.83e-09!32;CL:0000566!1.83e-09!32;CL:0000837!1.83e-09!32;CL:0000738!4.56e-09!17;CL:0002087!4.56e-09!17;CL:0000219!9.11e-09!54;CL:0000084!1.74e-08!11;CL:0000827!1.74e-08!11;CL:0002320!3.27e-08!46;CL:0000134!3.27e-08!46;CL:0000548!8.90e-07!115;CL:0000004!8.90e-07!115;CL:0000255!8.90e-07!115|ontology_enrichment_celltype_v019_2=CL:0000893,3.91e-58,6;CL:0002489,3.91e-58,6;CL:0000898,3.91e-58,6;CL:0000809,3.91e-58,6;CL:0000810,3.91e-58,6;CL:0000895,3.91e-58,6;CL:0000808,3.91e-58,6;CL:0000894,3.91e-58,6;CL:0000806,3.91e-58,6;CL:0000807,3.91e-58,6;CL:0000805,3.91e-58,6;CL:0002425,3.91e-58,6;CL:0002436,3.91e-58,6;CL:0002427,3.91e-58,6;CL:0002428,3.91e-58,6;CL:0002429,3.91e-58,6;CL:0002433,3.91e-58,6;CL:0002431,3.91e-58,6;CL:0002432,3.91e-58,6;CL:0000624,6.68e-44,8;CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006562!1.23e-08!24;UBERON:0001557!1.23e-08!24;UBERON:0001042!1.23e-08!24;UBERON:0008814!1.23e-08!24;UBERON:0009145!1.23e-08!24;UBERON:0002384!3.27e-08!46;UBERON:0000072!1.83e-07!27;UBERON:0002370!2.43e-07!23;UBERON:0000974!2.43e-07!23;UBERON:0004807!2.43e-07!23;UBERON:0005058!2.43e-07!23;UBERON:0003351!2.43e-07!23;UBERON:0009113!2.43e-07!23;UBERON:0003295!2.43e-07!23;UBERON:0009722!2.43e-07!23;UBERON:0005562!2.43e-07!23;UBERON:0007690!2.43e-07!23;UBERON:0003408!5.75e-07!24;UBERON:0004177!9.72e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.04e-16,23;UBERON:0000974,6.04e-16,23;UBERON:0004807,6.04e-16,23;UBERON:0005058,6.04e-16,23;UBERON:0003351,6.04e-16,23;UBERON:0009113,6.04e-16,23;UBERON:0003295,6.04e-16,23;UBERON:0009722,6.04e-16,23;UBERON:0005562,6.04e-16,23;UBERON:0007690,6.04e-16,23;UBERON:0006562,2.55e-15,24;UBERON:0003408,2.55e-15,24;UBERON:0001557,2.55e-15,24;UBERON:0001042,2.55e-15,24;UBERON:0008814,2.55e-15,24;UBERON:0009145,2.55e-15,24;UBERON:0000072,1.02e-13,27;UBERON:0004177,7.80e-13,29;UBERON:0005057,7.80e-13,29;UBERON:0000077,8.81e-11,35;UBERON:0007811,1.67e-10,36;UBERON:0000065,2.53e-09,41;UBERON:0001004,4.04e-09,42;UBERON:0000153,6.31e-09,43;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002384,2.15e-08,46;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48;UBERON:0003929,3.83e-07,55|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0,0,0.387369970324729,5.34997144176334,16.8526458951835,1.54096171402954,1.83475965689274,0.171200729931206,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0.367093504323363,0,0.218025156380447,0,0,0.139986421625363,0,0.503347818173209,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p11@Nfkb2}} | ||
|EntrezGene=18034 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=E9Q1H6 | |||
|association_with_transcript=-16bp_to_ENSMUST00000163266_5end | |||
|description=CAGE_peak_11_at_Nfkb2_5end | |||
|id=chr19:46380462..46380471,+ | |||
|ontology_enrichment_celltype=CL:0000624!5.67e-12!8;CL:0000893!1.78e-11!6;CL:0002489!1.78e-11!6;CL:0000898!1.78e-11!6;CL:0000809!1.78e-11!6;CL:0000810!1.78e-11!6;CL:0000895!1.78e-11!6;CL:0000808!1.78e-11!6;CL:0000894!1.78e-11!6;CL:0000806!1.78e-11!6;CL:0000807!1.78e-11!6;CL:0000805!1.78e-11!6;CL:0002425!1.78e-11!6;CL:0002436!1.78e-11!6;CL:0002427!1.78e-11!6;CL:0002428!1.78e-11!6;CL:0002429!1.78e-11!6;CL:0002433!1.78e-11!6;CL:0002431!1.78e-11!6;CL:0002432!1.78e-11!6;CL:0002031!6.59e-11!25;CL:0000791!1.49e-10!9;CL:0000789!1.49e-10!9;CL:0002420!1.49e-10!9;CL:0002419!1.49e-10!9;CL:0000790!1.49e-10!9;CL:0000838!2.04e-10!12;CL:0000542!1.58e-09!13;CL:0000051!1.58e-09!13;CL:0000988!1.83e-09!32;CL:0002032!1.83e-09!32;CL:0000037!1.83e-09!32;CL:0000566!1.83e-09!32;CL:0000837!1.83e-09!32;CL:0000738!4.56e-09!17;CL:0002087!4.56e-09!17;CL:0000219!9.11e-09!54;CL:0000084!1.74e-08!11;CL:0000827!1.74e-08!11;CL:0002320!3.27e-08!46;CL:0000134!3.27e-08!46;CL:0000548!8.90e-07!115;CL:0000004!8.90e-07!115;CL:0000255!8.90e-07!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,3.91e-58,6;CL:0002489,3.91e-58,6;CL:0000898,3.91e-58,6;CL:0000809,3.91e-58,6;CL:0000810,3.91e-58,6;CL:0000895,3.91e-58,6;CL:0000808,3.91e-58,6;CL:0000894,3.91e-58,6;CL:0000806,3.91e-58,6;CL:0000807,3.91e-58,6;CL:0000805,3.91e-58,6;CL:0002425,3.91e-58,6;CL:0002436,3.91e-58,6;CL:0002427,3.91e-58,6;CL:0002428,3.91e-58,6;CL:0002429,3.91e-58,6;CL:0002433,3.91e-58,6;CL:0002431,3.91e-58,6;CL:0002432,3.91e-58,6;CL:0000624,6.68e-44,8;CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!1.23e-08!24;UBERON:0001557!1.23e-08!24;UBERON:0001042!1.23e-08!24;UBERON:0008814!1.23e-08!24;UBERON:0009145!1.23e-08!24;UBERON:0002384!3.27e-08!46;UBERON:0000072!1.83e-07!27;UBERON:0002370!2.43e-07!23;UBERON:0000974!2.43e-07!23;UBERON:0004807!2.43e-07!23;UBERON:0005058!2.43e-07!23;UBERON:0003351!2.43e-07!23;UBERON:0009113!2.43e-07!23;UBERON:0003295!2.43e-07!23;UBERON:0009722!2.43e-07!23;UBERON:0005562!2.43e-07!23;UBERON:0007690!2.43e-07!23;UBERON:0003408!5.75e-07!24;UBERON:0004177!9.72e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.04e-16,23;UBERON:0000974,6.04e-16,23;UBERON:0004807,6.04e-16,23;UBERON:0005058,6.04e-16,23;UBERON:0003351,6.04e-16,23;UBERON:0009113,6.04e-16,23;UBERON:0003295,6.04e-16,23;UBERON:0009722,6.04e-16,23;UBERON:0005562,6.04e-16,23;UBERON:0007690,6.04e-16,23;UBERON:0006562,2.55e-15,24;UBERON:0003408,2.55e-15,24;UBERON:0001557,2.55e-15,24;UBERON:0001042,2.55e-15,24;UBERON:0008814,2.55e-15,24;UBERON:0009145,2.55e-15,24;UBERON:0000072,1.02e-13,27;UBERON:0004177,7.80e-13,29;UBERON:0005057,7.80e-13,29;UBERON:0000077,8.81e-11,35;UBERON:0007811,1.67e-10,36;UBERON:0000065,2.53e-09,41;UBERON:0001004,4.04e-09,42;UBERON:0000153,6.31e-09,43;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002384,2.15e-08,46;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48;UBERON:0003929,3.83e-07,55 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0,0,0.387369970324729,5.34997144176334,16.8526458951835,1.54096171402954,1.83475965689274,0.171200729931206,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0.367093504323363,0,0.218025156380447,0,0,0.139986421625363,0,0.503347818173209,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@Nfkb2 | |||
}} |
Revision as of 17:50, 13 September 2013
Short description: | p11@Nfkb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Nfkb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -16bp_to_ENSMUST00000163266_5end |
EntrezGene: | Nfkb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 6.04e-16 | 23 |
neck | 6.04e-16 | 23 |
respiratory system epithelium | 6.04e-16 | 23 |
hemolymphoid system gland | 6.04e-16 | 23 |
pharyngeal epithelium | 6.04e-16 | 23 |
thymic region | 6.04e-16 | 23 |
pharyngeal gland | 6.04e-16 | 23 |
entire pharyngeal arch endoderm | 6.04e-16 | 23 |
thymus primordium | 6.04e-16 | 23 |
early pharyngeal endoderm | 6.04e-16 | 23 |
pharynx | 2.55e-15 | 24 |
gland of gut | 2.55e-15 | 24 |
upper respiratory tract | 2.55e-15 | 24 |
chordate pharynx | 2.55e-15 | 24 |
pharyngeal arch system | 2.55e-15 | 24 |
pharyngeal region of foregut | 2.55e-15 | 24 |
segment of respiratory tract | 1.02e-13 | 27 |
hemopoietic organ | 7.80e-13 | 29 |
immune organ | 7.80e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 8.81e-11 | 35 |
craniocervical region | 1.67e-10 | 36 |
respiratory tract | 2.53e-09 | 41 |
respiratory system | 4.04e-09 | 42 |
anterior region of body | 6.31e-09 | 43 |
hematopoietic system | 1.45e-08 | 45 |
blood island | 1.45e-08 | 45 |
connective tissue | 2.15e-08 | 46 |
hemolymphoid system | 4.46e-08 | 48 |
immune system | 4.46e-08 | 48 |
gut epithelium | 3.83e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.