FFCP PHASE1:Mm9::chr2:30683702..30683714,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72323|HGNC=|MCL_coexpression_id=7|UniProt=|association_with_transcript=70bp_to_ENSMUST00000129628_5end|description=CAGE_peak_3_at_Asb6_5end|id=chr2:30683702..30683714,-|ontology_enrichment_celltype=CL:0000791!6.22e-10!9;CL:0000789!6.22e-10!9;CL:0002420!6.22e-10!9;CL:0002419!6.22e-10!9;CL:0000790!6.22e-10!9;CL:0000988!6.21e-09!32;CL:0002032!6.21e-09!32;CL:0000037!6.21e-09!32;CL:0000566!6.21e-09!32;CL:0000837!6.21e-09!32;CL:0000624!7.24e-09!8;CL:0000084!7.45e-09!11;CL:0000827!7.45e-09!11;CL:0000838!7.41e-08!12;CL:0002031!9.75e-08!25;CL:0000893!3.73e-07!6;CL:0002489!3.73e-07!6;CL:0000898!3.73e-07!6;CL:0000809!3.73e-07!6;CL:0000810!3.73e-07!6;CL:0000895!3.73e-07!6;CL:0000808!3.73e-07!6;CL:0000894!3.73e-07!6;CL:0000806!3.73e-07!6;CL:0000807!3.73e-07!6;CL:0000805!3.73e-07!6;CL:0002425!3.73e-07!6;CL:0002436!3.73e-07!6;CL:0002427!3.73e-07!6;CL:0002428!3.73e-07!6;CL:0002429!3.73e-07!6;CL:0002433!3.73e-07!6;CL:0002431!3.73e-07!6;CL:0002432!3.73e-07!6;CL:0000738!4.32e-07!17;CL:0002087!4.32e-07!17;CL:0000542!5.10e-07!13;CL:0000051!5.10e-07!13;CL:0002320!9.73e-07!46;CL:0000134!9.73e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,5.98e-35,9;CL:0000789,5.98e-35,9;CL:0002420,5.98e-35,9;CL:0002419,5.98e-35,9;CL:0000790,5.98e-35,9;CL:0000893,5.19e-34,6;CL:0002489,5.19e-34,6;CL:0000898,5.19e-34,6;CL:0000809,5.19e-34,6;CL:0000810,5.19e-34,6;CL:0000895,5.19e-34,6;CL:0000808,5.19e-34,6;CL:0000894,5.19e-34,6;CL:0000806,5.19e-34,6;CL:0000807,5.19e-34,6;CL:0000805,5.19e-34,6;CL:0002425,5.19e-34,6;CL:0002436,5.19e-34,6;CL:0002427,5.19e-34,6;CL:0002428,5.19e-34,6;CL:0002429,5.19e-34,6;CL:0002433,5.19e-34,6;CL:0002431,5.19e-34,6;CL:0002432,5.19e-34,6;CL:0000084,1.07e-28,11;CL:0000827,1.07e-28,11;CL:0000838,2.38e-26,12;CL:0000624,1.10e-25,8;CL:0000542,2.32e-24,13;CL:0000051,2.32e-24,13;CL:0000738,9.72e-19,17;CL:0002087,9.72e-19,17;CL:0000988,2.53e-14,32;CL:0002032,2.53e-14,32;CL:0000037,2.53e-14,32;CL:0000837,2.53e-14,32;CL:0000625,2.06e-13,1;CL:0002031,7.24e-13,25;CL:0002320,4.97e-10,46;CL:0000134,4.97e-10,46;CL:0000219,1.45e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!9.73e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.97e-10,46;UBERON:0002370,2.79e-09,23;UBERON:0000974,2.79e-09,23;UBERON:0004807,2.79e-09,23;UBERON:0005058,2.79e-09,23;UBERON:0003351,2.79e-09,23;UBERON:0009113,2.79e-09,23;UBERON:0003295,2.79e-09,23;UBERON:0009722,2.79e-09,23;UBERON:0005562,2.79e-09,23;UBERON:0007690,2.79e-09,23;UBERON:0006562,6.53e-09,24;UBERON:0003408,6.53e-09,24;UBERON:0001557,6.53e-09,24;UBERON:0001042,6.53e-09,24;UBERON:0008814,6.53e-09,24;UBERON:0009145,6.53e-09,24;UBERON:0000072,5.74e-08,27;UBERON:0004177,1.91e-07,29;UBERON:0005057,1.91e-07,29;UBERON:0002390,2.61e-07,45;UBERON:0003061,2.61e-07,45;UBERON:0002193,7.28e-07,48;UBERON:0002405,7.28e-07,48|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,12.9525624379533,9.83071010552373,1.19852577757853,1.59544317990673,0.342401459862411,0.174840804837995,0,0.202475267389826,0,0,0.548457734422955,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0.432982082022428,0.506719730950197,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0.359445373517761,0,0.254140454146129,0,0,0.125654352112864,0,0,0.20778804455956,0,0,0,0.252722758433675,0,0.130120442962704,0,0,0,0.136072998302656,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0.257347907114715,1.42081749697796,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0,1.05418608574999,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0.21183207086382,0.882113592219848,0,0.322928853391811,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0.509935289981566,0.279902904647316,0.414599921413271,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0.358053391334963,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0.409231043169689,0,0,0,0,0.214871054048298,0.382576664137687,0,0|short_description=p3@Asb6}} | ||
|EntrezGene=72323 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt= | |||
|association_with_transcript=70bp_to_ENSMUST00000129628_5end | |||
|description=CAGE_peak_3_at_Asb6_5end | |||
|id=chr2:30683702..30683714,- | |||
|ontology_enrichment_celltype=CL:0000791!6.22e-10!9;CL:0000789!6.22e-10!9;CL:0002420!6.22e-10!9;CL:0002419!6.22e-10!9;CL:0000790!6.22e-10!9;CL:0000988!6.21e-09!32;CL:0002032!6.21e-09!32;CL:0000037!6.21e-09!32;CL:0000566!6.21e-09!32;CL:0000837!6.21e-09!32;CL:0000624!7.24e-09!8;CL:0000084!7.45e-09!11;CL:0000827!7.45e-09!11;CL:0000838!7.41e-08!12;CL:0002031!9.75e-08!25;CL:0000893!3.73e-07!6;CL:0002489!3.73e-07!6;CL:0000898!3.73e-07!6;CL:0000809!3.73e-07!6;CL:0000810!3.73e-07!6;CL:0000895!3.73e-07!6;CL:0000808!3.73e-07!6;CL:0000894!3.73e-07!6;CL:0000806!3.73e-07!6;CL:0000807!3.73e-07!6;CL:0000805!3.73e-07!6;CL:0002425!3.73e-07!6;CL:0002436!3.73e-07!6;CL:0002427!3.73e-07!6;CL:0002428!3.73e-07!6;CL:0002429!3.73e-07!6;CL:0002433!3.73e-07!6;CL:0002431!3.73e-07!6;CL:0002432!3.73e-07!6;CL:0000738!4.32e-07!17;CL:0002087!4.32e-07!17;CL:0000542!5.10e-07!13;CL:0000051!5.10e-07!13;CL:0002320!9.73e-07!46;CL:0000134!9.73e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.98e-35,9;CL:0000789,5.98e-35,9;CL:0002420,5.98e-35,9;CL:0002419,5.98e-35,9;CL:0000790,5.98e-35,9;CL:0000893,5.19e-34,6;CL:0002489,5.19e-34,6;CL:0000898,5.19e-34,6;CL:0000809,5.19e-34,6;CL:0000810,5.19e-34,6;CL:0000895,5.19e-34,6;CL:0000808,5.19e-34,6;CL:0000894,5.19e-34,6;CL:0000806,5.19e-34,6;CL:0000807,5.19e-34,6;CL:0000805,5.19e-34,6;CL:0002425,5.19e-34,6;CL:0002436,5.19e-34,6;CL:0002427,5.19e-34,6;CL:0002428,5.19e-34,6;CL:0002429,5.19e-34,6;CL:0002433,5.19e-34,6;CL:0002431,5.19e-34,6;CL:0002432,5.19e-34,6;CL:0000084,1.07e-28,11;CL:0000827,1.07e-28,11;CL:0000838,2.38e-26,12;CL:0000624,1.10e-25,8;CL:0000542,2.32e-24,13;CL:0000051,2.32e-24,13;CL:0000738,9.72e-19,17;CL:0002087,9.72e-19,17;CL:0000988,2.53e-14,32;CL:0002032,2.53e-14,32;CL:0000037,2.53e-14,32;CL:0000837,2.53e-14,32;CL:0000625,2.06e-13,1;CL:0002031,7.24e-13,25;CL:0002320,4.97e-10,46;CL:0000134,4.97e-10,46;CL:0000219,1.45e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.73e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.97e-10,46;UBERON:0002370,2.79e-09,23;UBERON:0000974,2.79e-09,23;UBERON:0004807,2.79e-09,23;UBERON:0005058,2.79e-09,23;UBERON:0003351,2.79e-09,23;UBERON:0009113,2.79e-09,23;UBERON:0003295,2.79e-09,23;UBERON:0009722,2.79e-09,23;UBERON:0005562,2.79e-09,23;UBERON:0007690,2.79e-09,23;UBERON:0006562,6.53e-09,24;UBERON:0003408,6.53e-09,24;UBERON:0001557,6.53e-09,24;UBERON:0001042,6.53e-09,24;UBERON:0008814,6.53e-09,24;UBERON:0009145,6.53e-09,24;UBERON:0000072,5.74e-08,27;UBERON:0004177,1.91e-07,29;UBERON:0005057,1.91e-07,29;UBERON:0002390,2.61e-07,45;UBERON:0003061,2.61e-07,45;UBERON:0002193,7.28e-07,48;UBERON:0002405,7.28e-07,48 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,12.9525624379533,9.83071010552373,1.19852577757853,1.59544317990673,0.342401459862411,0.174840804837995,0,0.202475267389826,0,0,0.548457734422955,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0.432982082022428,0.506719730950197,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0.359445373517761,0,0.254140454146129,0,0,0.125654352112864,0,0,0.20778804455956,0,0,0,0.252722758433675,0,0.130120442962704,0,0,0,0.136072998302656,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0.257347907114715,1.42081749697796,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0,1.05418608574999,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0.21183207086382,0.882113592219848,0,0.322928853391811,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0.509935289981566,0.279902904647316,0.414599921413271,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0.358053391334963,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0.409231043169689,0,0,0,0,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p3@Asb6 | |||
}} |
Revision as of 23:42, 13 September 2013
Short description: | p3@Asb6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Asb6_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 70bp_to_ENSMUST00000129628_5end |
EntrezGene: | Asb6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.97e-10 | 46 |
thymus | 2.79e-09 | 23 |
neck | 2.79e-09 | 23 |
respiratory system epithelium | 2.79e-09 | 23 |
hemolymphoid system gland | 2.79e-09 | 23 |
pharyngeal epithelium | 2.79e-09 | 23 |
thymic region | 2.79e-09 | 23 |
pharyngeal gland | 2.79e-09 | 23 |
entire pharyngeal arch endoderm | 2.79e-09 | 23 |
thymus primordium | 2.79e-09 | 23 |
early pharyngeal endoderm | 2.79e-09 | 23 |
pharynx | 6.53e-09 | 24 |
gland of gut | 6.53e-09 | 24 |
upper respiratory tract | 6.53e-09 | 24 |
chordate pharynx | 6.53e-09 | 24 |
pharyngeal arch system | 6.53e-09 | 24 |
pharyngeal region of foregut | 6.53e-09 | 24 |
segment of respiratory tract | 5.74e-08 | 27 |
hemopoietic organ | 1.91e-07 | 29 |
immune organ | 1.91e-07 | 29 |
hematopoietic system | 2.61e-07 | 45 |
blood island | 2.61e-07 | 45 |
hemolymphoid system | 7.28e-07 | 48 |
immune system | 7.28e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.