FFCP PHASE1:Hg19::chr1:66796401..66796423,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5142|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8781|TSSclassifier=S|UniProt=E9PJ03|association_with_transcript=0bp_to_ENST00000528771_5end|coexpression_cluster_id=C15|description=CAGE_peak_28_at_PDE4B_5end|id=chr1:66796401..66796423,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004874;1.65e-16;1!UBERON:0007297;6.42e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.75e-38!57;UBERON:0005068!2.75e-38!57;UBERON:0006241!2.75e-38!57;UBERON:0007135!2.75e-38!57;UBERON:0007023!2.45e-35!115;UBERON:0002616!1.79e-31!59;UBERON:0000955!3.23e-27!69;UBERON:0006238!3.23e-27!69;UBERON:0002020!5.03e-27!34;UBERON:0003528!5.03e-27!34;UBERON:0001893!2.06e-26!34;UBERON:0002780!3.59e-26!41;UBERON:0001890!3.59e-26!41;UBERON:0006240!3.59e-26!41;UBERON:0003080!2.03e-25!42;UBERON:0001017!2.11e-25!82;UBERON:0002791!1.45e-24!33;UBERON:0003075!1.97e-24!86;UBERON:0007284!1.97e-24!86;UBERON:0005743!7.65e-24!86;UBERON:0002346!5.76e-23!90;UBERON:0001869!1.16e-22!32;UBERON:0000073!8.24e-21!94;UBERON:0001016!8.24e-21!94;UBERON:0002308!2.49e-19!9;UBERON:0000125!2.49e-19!9;UBERON:0000033!1.96e-16!123;UBERON:0003056!8.83e-16!61;UBERON:0000153!2.85e-15!129;UBERON:0007811!2.85e-15!129;UBERON:0002619!7.87e-15!22;UBERON:0002420!1.16e-14!9;UBERON:0007245!1.16e-14!9;UBERON:0010009!1.16e-14!9;UBERON:0010011!1.16e-14!9;UBERON:0000454!1.16e-14!9;UBERON:0003076!4.38e-14!15;UBERON:0003057!4.38e-14!15;UBERON:0009663!5.27e-14!7;UBERON:0001950!1.06e-13!20;UBERON:0000956!8.63e-13!25;UBERON:0000203!8.63e-13!25;UBERON:0002298!1.35e-12!8;UBERON:0004121!2.82e-12!169;UBERON:0000924!8.73e-12!173;UBERON:0006601!8.73e-12!173;UBERON:0000200!3.88e-11!6;UBERON:0004733!6.03e-11!12;UBERON:0002028!6.03e-11!12;UBERON:0007277!6.03e-11!12;UBERON:0004732!5.16e-10!13;UBERON:0006331!9.42e-10!3;UBERON:0000988!1.71e-09!3;UBERON:0002771!3.34e-09!3;UBERON:0000475!3.45e-09!365;UBERON:0004111!3.70e-09!241;UBERON:0000025!4.88e-09!194;UBERON:0001871!1.26e-08!7;UBERON:0002680!6.45e-08!9;UBERON:0001895!6.45e-08!9;UBERON:0010092!6.45e-08!9;UBERON:0002148!3.52e-07!2;UBERON:0009662!3.52e-07!2;UBERON:0000064!6.45e-07!219;UBERON:0001875!6.65e-07!2;UBERON:0006514!6.65e-07!2;UBERON:0001630!8.12e-07!2;UBERON:0005090!8.12e-07!2;UBERON:0000477!9.97e-07!286|ontology_enrichment_uberon_v019=UBERON:0002148;1.48e-31;2!UBERON:0006331;1.48e-31;2!UBERON:0009662;1.48e-31;2!UBERON:0000988;2.06e-21;3!UBERON:0000989;1.65e-16;1!UBERON:0001301;1.65e-16;1!UBERON:0008811;1.65e-16;1!UBERON:0000125;4.90e-16;9!UBERON:0002308;4.90e-16;9!UBERON:0002680;6.49e-16;9!UBERON:0001895;6.49e-16;9!UBERON:0003528;3.53e-13;34!UBERON:0002020;3.53e-13;34!UBERON:0004733;4.26e-12;12!UBERON:0002028;4.26e-12;12!UBERON:0004732;3.26e-11;13!UBERON:0002298;3.30e-11;6!UBERON:0001875;4.18e-09;2!UBERON:0006514;4.18e-09;2!UBERON:0001876;6.42e-09;2!UBERON:0002420;9.04e-08;9!UBERON:0007245;9.04e-08;9!UBERON:0010009;9.04e-08;9!UBERON:0010011;9.04e-08;9!UBERON:0000454;9.04e-08;9!UBERON:0002791;1.90e-07;32!UBERON:0001869;1.90e-07;32!UBERON:0001017;1.96e-07;75!UBERON:0000073;2.73e-07;53!UBERON:0002616;2.73e-07;53!UBERON:0001950;4.23e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0002148,2.97e-31,2;UBERON:0006331,2.97e-31,2;UBERON:0009662,2.97e-31,2;UBERON:0000988,3.28e-21,3;UBERON:0000989,1.04e-16,1;UBERON:0008811,1.04e-16,1;UBERON:0006258,1.04e-16,1;UBERON:0005876,1.04e-16,1;UBERON:0004874,1.04e-16,1;UBERON:0003076,1.31e-16,15;UBERON:0003057,1.31e-16,15;UBERON:0001049,1.67e-16,56;UBERON:0005068,1.67e-16,56;UBERON:0006241,1.67e-16,56;UBERON:0007135,1.67e-16,56;UBERON:0001301,2.63e-16,1;UBERON:0000125,6.01e-16,9;UBERON:0002308,6.01e-16,9;UBERON:0002680,6.66e-16,9;UBERON:0001895,6.66e-16,9;UBERON:0010092,6.66e-16,9;UBERON:0003528,1.88e-15,34;UBERON:0002020,1.88e-15,34;UBERON:0007023,3.36e-15,114;UBERON:0000073,2.07e-13,53;UBERON:0002616,2.07e-13,53;UBERON:0004733,4.35e-12,12;UBERON:0002028,4.35e-12,12;UBERON:0007277,4.35e-12,12;UBERON:0004732,3.32e-11,13;UBERON:0001017,3.87e-11,81;UBERON:0003075,3.87e-11,82;UBERON:0007284,3.87e-11,82;UBERON:0002298,4.16e-11,6;UBERON:0002346,1.35e-10,86;UBERON:0000955,3.05e-10,68;UBERON:0006238,3.05e-10,68;UBERON:0001016,5.53e-10,89;UBERON:0001875,4.02e-09,2;UBERON:0006514,4.02e-09,2;UBERON:0001876,6.94e-09,2;UBERON:0010371,1.16e-08,104;UBERON:0002420,9.20e-08,9;UBERON:0007245,9.20e-08,9;UBERON:0010009,9.20e-08,9;UBERON:0010011,9.20e-08,9;UBERON:0000454,9.20e-08,9;UBERON:0002791,1.07e-07,32;UBERON:0001869,1.07e-07,32;UBERON:0001893,2.86e-07,34;UBERON:0001950,4.23e-07,20|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |||
|TSSclassifier=S | |||
|UniProt=E9PJ03 | |||
|association_with_transcript=0bp_to_ENST00000528771_5end | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_28_at_PDE4B_5end | |||
|id=chr1:66796401..66796423,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.65e-16;1!UBERON:0007297;6.42e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.75e-38!57;UBERON:0005068!2.75e-38!57;UBERON:0006241!2.75e-38!57;UBERON:0007135!2.75e-38!57;UBERON:0007023!2.45e-35!115;UBERON:0002616!1.79e-31!59;UBERON:0000955!3.23e-27!69;UBERON:0006238!3.23e-27!69;UBERON:0002020!5.03e-27!34;UBERON:0003528!5.03e-27!34;UBERON:0001893!2.06e-26!34;UBERON:0002780!3.59e-26!41;UBERON:0001890!3.59e-26!41;UBERON:0006240!3.59e-26!41;UBERON:0003080!2.03e-25!42;UBERON:0001017!2.11e-25!82;UBERON:0002791!1.45e-24!33;UBERON:0003075!1.97e-24!86;UBERON:0007284!1.97e-24!86;UBERON:0005743!7.65e-24!86;UBERON:0002346!5.76e-23!90;UBERON:0001869!1.16e-22!32;UBERON:0000073!8.24e-21!94;UBERON:0001016!8.24e-21!94;UBERON:0002308!2.49e-19!9;UBERON:0000125!2.49e-19!9;UBERON:0000033!1.96e-16!123;UBERON:0003056!8.83e-16!61;UBERON:0000153!2.85e-15!129;UBERON:0007811!2.85e-15!129;UBERON:0002619!7.87e-15!22;UBERON:0002420!1.16e-14!9;UBERON:0007245!1.16e-14!9;UBERON:0010009!1.16e-14!9;UBERON:0010011!1.16e-14!9;UBERON:0000454!1.16e-14!9;UBERON:0003076!4.38e-14!15;UBERON:0003057!4.38e-14!15;UBERON:0009663!5.27e-14!7;UBERON:0001950!1.06e-13!20;UBERON:0000956!8.63e-13!25;UBERON:0000203!8.63e-13!25;UBERON:0002298!1.35e-12!8;UBERON:0004121!2.82e-12!169;UBERON:0000924!8.73e-12!173;UBERON:0006601!8.73e-12!173;UBERON:0000200!3.88e-11!6;UBERON:0004733!6.03e-11!12;UBERON:0002028!6.03e-11!12;UBERON:0007277!6.03e-11!12;UBERON:0004732!5.16e-10!13;UBERON:0006331!9.42e-10!3;UBERON:0000988!1.71e-09!3;UBERON:0002771!3.34e-09!3;UBERON:0000475!3.45e-09!365;UBERON:0004111!3.70e-09!241;UBERON:0000025!4.88e-09!194;UBERON:0001871!1.26e-08!7;UBERON:0002680!6.45e-08!9;UBERON:0001895!6.45e-08!9;UBERON:0010092!6.45e-08!9;UBERON:0002148!3.52e-07!2;UBERON:0009662!3.52e-07!2;UBERON:0000064!6.45e-07!219;UBERON:0001875!6.65e-07!2;UBERON:0006514!6.65e-07!2;UBERON:0001630!8.12e-07!2;UBERON:0005090!8.12e-07!2;UBERON:0000477!9.97e-07!286 | |||
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|short_description=p28@PDE4B | |||
}} |
Revision as of 06:31, 12 September 2013
Short description: | p28@PDE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_PDE4B_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 0bp_to_ENST00000528771_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | E9PJ03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.