FFCP PHASE1:Hg19::chr1:153650594..153650605,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:153650594..153650605,+|id=chr1:153650594..153650605,+|ontology_enrichment_celltype=CL:0000990!9.04e-14!8;CL:0002150!3.15e-11!3;CL:0000861!3.15e-11!3;CL:0000451!4.06e-11!10;CL:0002617!3.17e-07!2;CL:0000453!7.63e-07!5|ontology_enrichment_celltype_v019=CL:0000990;3.08e-55;8!CL:0000451;2.83e-45;10!CL:0000840;1.02e-30;5!CL:0000453;8.14e-17;5!CL:0002262;2.47e-11;2!CL:1000398;2.47e-11;2!CL:0002615;7.26e-08;3|ontology_enrichment_celltype_v019_2=CL:0000990,2.75e-55,8;CL:0000451,2.58e-45,10;CL:0000840,1.13e-30,5;CL:0001029,1.13e-30,5;CL:0000453,6.94e-17,5;CL:0002262,2.23e-11,2;CL:1000398,2.23e-11,2;CL:0002615,8.29e-08,3|ontology_enrichment_development_v019=UBERON:0006965;3.70e-11;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;6.31e-21;1!DOID:4549;6.31e-21;1!DOID:5861;6.31e-21;1!DOID:6496;6.31e-21;1|ontology_enrichment_disease_v019_2=DOID:3371,7.72e-21,1;DOID:4549,7.72e-21,1;DOID:5861,7.72e-21,1;DOID:6496,7.72e-21,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001281;2.47e-11;2!UBERON:0003497;2.47e-11;2!UBERON:0003909;2.47e-11;2!UBERON:0003835;2.47e-11;2!UBERON:0001280;5.54e-08;3!UBERON:0004647;5.54e-08;3!UBERON:0002418;7.26e-08;3!UBERON:0004755;7.26e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.23e-11,2;UBERON:0003497,2.23e-11,2;UBERON:0003909,2.23e-11,2;UBERON:0003835,2.23e-11,2;UBERON:0001280,5.18e-08,3;UBERON:0004647,5.18e-08,3;UBERON:0005171,5.18e-08,3;UBERON:0002418,7.76e-08,3;UBERON:0004755,7.76e-08,3|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,2.92092654289215,3.30846500868608,3.19099105245276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0,0,0,0.871517776369625,0,0,0,0.38474715694639,2.95262181849859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,1.19548792950642,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,1.25783230675811,0.877071805034227,0.903270027585302,0,1.059073520298,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.394028536495991,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,2.92290463259083,1.99297260470045,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.124149428591716,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0|short_description=p@chr1:153650594..153650605,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:153650594..153650605,+ | |||
|id=chr1:153650594..153650605,+ | |||
|ontology_enrichment_celltype=CL:0000990!9.04e-14!8;CL:0002150!3.15e-11!3;CL:0000861!3.15e-11!3;CL:0000451!4.06e-11!10;CL:0002617!3.17e-07!2;CL:0000453!7.63e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000990;3.08e-55;8!CL:0000451;2.83e-45;10!CL:0000840;1.02e-30;5!CL:0000453;8.14e-17;5!CL:0002262;2.47e-11;2!CL:1000398;2.47e-11;2!CL:0002615;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,2.75e-55,8;CL:0000451,2.58e-45,10;CL:0000840,1.13e-30,5;CL:0001029,1.13e-30,5;CL:0000453,6.94e-17,5;CL:0002262,2.23e-11,2;CL:1000398,2.23e-11,2;CL:0002615,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;3.70e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;6.31e-21;1!DOID:4549;6.31e-21;1!DOID:5861;6.31e-21;1!DOID:6496;6.31e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.72e-21,1;DOID:4549,7.72e-21,1;DOID:5861,7.72e-21,1;DOID:6496,7.72e-21,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.47e-11;2!UBERON:0003497;2.47e-11;2!UBERON:0003909;2.47e-11;2!UBERON:0003835;2.47e-11;2!UBERON:0001280;5.54e-08;3!UBERON:0004647;5.54e-08;3!UBERON:0002418;7.26e-08;3!UBERON:0004755;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.23e-11,2;UBERON:0003497,2.23e-11,2;UBERON:0003909,2.23e-11,2;UBERON:0003835,2.23e-11,2;UBERON:0001280,5.18e-08,3;UBERON:0004647,5.18e-08,3;UBERON:0005171,5.18e-08,3;UBERON:0002418,7.76e-08,3;UBERON:0004755,7.76e-08,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,2.92092654289215,3.30846500868608,3.19099105245276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0,0,0,0.871517776369625,0,0,0,0.38474715694639,2.95262181849859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,1.19548792950642,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,1.25783230675811,0.877071805034227,0.903270027585302,0,1.059073520298,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.394028536495991,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,2.92290463259083,1.99297260470045,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.124149428591716,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr1:153650594..153650605,+ | |||
}} |
Revision as of 00:33, 12 September 2013
Short description: | p@chr1:153650594..153650605, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:153650594..153650605, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 2.75e-55 | 8 |
dendritic cell | 2.58e-45 | 10 |
immature conventional dendritic cell | 1.13e-30 | 5 |
common dendritic progenitor | 1.13e-30 | 5 |
Langerhans cell | 6.94e-17 | 5 |
endothelial cell of sinusoid | 2.23e-11 | 2 |
endothelial cell of hepatic sinusoid | 2.23e-11 | 2 |
adipocyte of omentum tissue | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.23e-11 | 2 |
abdomen blood vessel | 2.23e-11 | 2 |
sinusoid | 2.23e-11 | 2 |
abdominal segment blood vessel | 2.23e-11 | 2 |
liver parenchyma | 5.18e-08 | 3 |
liver lobule | 5.18e-08 | 3 |
hepatic duct | 5.18e-08 | 3 |
cartilage tissue | 7.76e-08 | 3 |
skeletal tissue | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.72e-21 | 1 |
extraosseous chondrosarcoma | 7.72e-21 | 1 |
myxoid chondrosarcoma | 7.72e-21 | 1 |
extraskeletal myxoid chondrosarcoma | 7.72e-21 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.