FFCP PHASE1:Hg19::chr1:154980607..154980631,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3875|description=CAGE_peak_at_chr1:154980607..154980631,+|id=chr1:154980607..154980631,+|ontology_enrichment_celltype=CL:0000766!6.75e-50!76;CL:0002194!5.17e-49!63;CL:0000576!5.17e-49!63;CL:0000040!5.17e-49!63;CL:0000559!5.17e-49!63;CL:0002009!7.56e-47!65;CL:0000839!2.09e-43!70;CL:0000557!1.71e-42!71;CL:0002057!3.06e-42!42;CL:0000860!2.61e-38!45;CL:0000763!6.31e-38!112;CL:0000049!6.31e-38!112;CL:0000738!1.04e-26!140;CL:0002087!4.49e-26!119;CL:0000037!4.74e-25!172;CL:0000566!4.74e-25!172;CL:0002032!2.18e-23!165;CL:0000837!2.18e-23!165;CL:0000988!3.39e-22!182;CL:0002031!7.27e-21!124;CL:0002393!8.10e-12!9;CL:0002397!8.10e-12!9|ontology_enrichment_celltype_v019=CL:0000576;1.14e-56;48!CL:0000473;1.50e-48;39!CL:0000234;1.50e-48;39!CL:0000860;1.76e-48;33!CL:0002057;1.76e-48;33!CL:0000766;1.74e-42;69!CL:0000763;1.17e-23;100!CL:0002393;4.06e-17;6!CL:0002397;4.06e-17;6!CL:0000235;8.14e-12;6!CL:0002087;1.04e-11;104!CL:0000738;3.83e-11;136!CL:0000875;1.27e-09;3!CL:0002396;1.27e-09;3!CL:0000767;2.83e-09;3!CL:0000094;7.07e-09;8!CL:0000988;2.27e-08;177|ontology_enrichment_celltype_v019_2=CL:0000766,1.31e-88,72;CL:0002194,3.85e-88,59;CL:0000576,3.85e-88,59;CL:0000040,3.85e-88,59;CL:0000559,3.85e-88,59;CL:0000473,1.31e-87,48;CL:0000234,1.31e-87,48;CL:0002009,6.69e-85,61;CL:0000839,1.20e-77,66;CL:0000860,6.81e-77,42;CL:0002057,6.81e-77,42;CL:0000557,2.51e-76,67;CL:0000763,2.91e-73,108;CL:0000049,2.91e-73,108;CL:0000037,6.61e-48,168;CL:0000738,3.62e-47,136;CL:0002032,1.53e-46,161;CL:0000837,1.53e-46,161;CL:0002087,4.08e-46,115;CL:0000988,9.39e-45,177;CL:0002031,1.80e-39,120;CL:0002393,2.72e-25,9;CL:0002397,2.72e-25,9;CL:0000134,4.38e-16,354;CL:0002320,1.70e-15,361;CL:0000219,2.02e-13,386;CL:0000235,1.24e-11,6;CL:0000048,6.78e-11,427;CL:0000723,1.51e-10,433;CL:0000034,4.23e-10,441;CL:0000875,9.82e-10,3;CL:0002396,9.82e-10,3;CL:0000767,2.69e-09,3;CL:0000094,7.35e-09,8|ontology_enrichment_development_v019=CL:0002057;2.70e-52;42!CL:0000049;8.88e-24;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:8692,8.85e-07,31|ontology_enrichment_uberon=UBERON:0002390!1.11e-43!102;UBERON:0003061!1.11e-43!102;UBERON:0002193!1.09e-38!112;UBERON:0002371!1.10e-36!80;UBERON:0001474!1.20e-32!86;UBERON:0004765!1.10e-25!101;UBERON:0001434!1.10e-25!101;UBERON:0002405!3.74e-25!115;UBERON:0007023!1.91e-20!115;UBERON:0003081!5.51e-14!216;UBERON:0002204!2.09e-10!167;UBERON:0000178!4.93e-08!15;UBERON:0000179!4.93e-08!15;UBERON:0000463!4.93e-08!15;UBERON:0000062!3.59e-07!511|ontology_enrichment_uberon_v019=UBERON:0000178;4.99e-08;15!UBERON:0000179;4.99e-08;15!UBERON:0000463;4.99e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.12e-70,98;UBERON:0003061,6.12e-70,98;UBERON:0002371,5.68e-66,76;UBERON:0002193,2.80e-62,108;UBERON:0001474,2.56e-60,82;UBERON:0002405,2.85e-54,93;UBERON:0004765,6.10e-54,90;UBERON:0001434,2.15e-47,100;UBERON:0003081,2.71e-28,203;UBERON:0002204,1.04e-23,167;UBERON:0002384,1.08e-14,371;UBERON:0000926,2.36e-14,315;UBERON:0004120,2.36e-14,315;UBERON:0006603,2.36e-14,315;UBERON:0000178,3.82e-08,15;UBERON:0000179,3.82e-08,15;UBERON:0000463,3.82e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,1.53531759238885,2.16742572642506,0,0,0,0,0,0.293600439334847,3.32397245119126,1.40381113229099,1.95309783644267,4.25439401055856,0.971680998056939,4.37878464978117,9.8870802370104,4.53451132426571,4.60909716256851,6.27558399645349,3.28934310417461,2.16794459626573,1.1507695692886,0.256160706529101,1.41889337933151,2.41321976515633,0.645484683583826,2.70852973188684,6.21199720490596,1.36453075028923,1.12361742222542,2.75475503133812,1.92557416245656,2.55734850319616,6.26717470354761,2.59302754908121,2.55734850319616,0,0.56738522469114,1.86846674698672,1.7587406567972,1.0429658368404,1.3031330682307,0.605399502633369,0,0.949387162322653,3.80259515361495,5.31510749912609,2.09658645508376,9.32327638515909,7.35866774923381,6.58974905458029,2.85012743741249,3.58050018958362,2.37463399894024,0,0,0,0,0,0,1.32208974556972,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0.174129737299267,0.797747763113191,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.674338760312407,0,0.220587945464788,0.217879444092406,0,0.674156540800822,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,2.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3875 | |||
|description=CAGE_peak_at_chr1:154980607..154980631,+ | |||
|id=chr1:154980607..154980631,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.75e-50!76;CL:0002194!5.17e-49!63;CL:0000576!5.17e-49!63;CL:0000040!5.17e-49!63;CL:0000559!5.17e-49!63;CL:0002009!7.56e-47!65;CL:0000839!2.09e-43!70;CL:0000557!1.71e-42!71;CL:0002057!3.06e-42!42;CL:0000860!2.61e-38!45;CL:0000763!6.31e-38!112;CL:0000049!6.31e-38!112;CL:0000738!1.04e-26!140;CL:0002087!4.49e-26!119;CL:0000037!4.74e-25!172;CL:0000566!4.74e-25!172;CL:0002032!2.18e-23!165;CL:0000837!2.18e-23!165;CL:0000988!3.39e-22!182;CL:0002031!7.27e-21!124;CL:0002393!8.10e-12!9;CL:0002397!8.10e-12!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.14e-56;48!CL:0000473;1.50e-48;39!CL:0000234;1.50e-48;39!CL:0000860;1.76e-48;33!CL:0002057;1.76e-48;33!CL:0000766;1.74e-42;69!CL:0000763;1.17e-23;100!CL:0002393;4.06e-17;6!CL:0002397;4.06e-17;6!CL:0000235;8.14e-12;6!CL:0002087;1.04e-11;104!CL:0000738;3.83e-11;136!CL:0000875;1.27e-09;3!CL:0002396;1.27e-09;3!CL:0000767;2.83e-09;3!CL:0000094;7.07e-09;8!CL:0000988;2.27e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.31e-88,72;CL:0002194,3.85e-88,59;CL:0000576,3.85e-88,59;CL:0000040,3.85e-88,59;CL:0000559,3.85e-88,59;CL:0000473,1.31e-87,48;CL:0000234,1.31e-87,48;CL:0002009,6.69e-85,61;CL:0000839,1.20e-77,66;CL:0000860,6.81e-77,42;CL:0002057,6.81e-77,42;CL:0000557,2.51e-76,67;CL:0000763,2.91e-73,108;CL:0000049,2.91e-73,108;CL:0000037,6.61e-48,168;CL:0000738,3.62e-47,136;CL:0002032,1.53e-46,161;CL:0000837,1.53e-46,161;CL:0002087,4.08e-46,115;CL:0000988,9.39e-45,177;CL:0002031,1.80e-39,120;CL:0002393,2.72e-25,9;CL:0002397,2.72e-25,9;CL:0000134,4.38e-16,354;CL:0002320,1.70e-15,361;CL:0000219,2.02e-13,386;CL:0000235,1.24e-11,6;CL:0000048,6.78e-11,427;CL:0000723,1.51e-10,433;CL:0000034,4.23e-10,441;CL:0000875,9.82e-10,3;CL:0002396,9.82e-10,3;CL:0000767,2.69e-09,3;CL:0000094,7.35e-09,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.70e-52;42!CL:0000049;8.88e-24;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.85e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.11e-43!102;UBERON:0003061!1.11e-43!102;UBERON:0002193!1.09e-38!112;UBERON:0002371!1.10e-36!80;UBERON:0001474!1.20e-32!86;UBERON:0004765!1.10e-25!101;UBERON:0001434!1.10e-25!101;UBERON:0002405!3.74e-25!115;UBERON:0007023!1.91e-20!115;UBERON:0003081!5.51e-14!216;UBERON:0002204!2.09e-10!167;UBERON:0000178!4.93e-08!15;UBERON:0000179!4.93e-08!15;UBERON:0000463!4.93e-08!15;UBERON:0000062!3.59e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.99e-08;15!UBERON:0000179;4.99e-08;15!UBERON:0000463;4.99e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.12e-70,98;UBERON:0003061,6.12e-70,98;UBERON:0002371,5.68e-66,76;UBERON:0002193,2.80e-62,108;UBERON:0001474,2.56e-60,82;UBERON:0002405,2.85e-54,93;UBERON:0004765,6.10e-54,90;UBERON:0001434,2.15e-47,100;UBERON:0003081,2.71e-28,203;UBERON:0002204,1.04e-23,167;UBERON:0002384,1.08e-14,371;UBERON:0000926,2.36e-14,315;UBERON:0004120,2.36e-14,315;UBERON:0006603,2.36e-14,315;UBERON:0000178,3.82e-08,15;UBERON:0000179,3.82e-08,15;UBERON:0000463,3.82e-08,15 | |||
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|short_description=p@chr1:154980607..154980631,+ | |||
}} |
Revision as of 00:42, 12 September 2013
Short description: | p@chr1:154980607..154980631, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:154980607..154980631, + |
Coexpression cluster: | C3875_CD14_Whole_CD14CD16_small_Neutrophils_Macrophage_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.12e-70 | 98 |
blood island | 6.12e-70 | 98 |
bone marrow | 5.68e-66 | 76 |
hemolymphoid system | 2.80e-62 | 108 |
bone element | 2.56e-60 | 82 |
immune system | 2.85e-54 | 93 |
skeletal element | 6.10e-54 | 90 |
skeletal system | 2.15e-47 | 100 |
lateral plate mesoderm | 2.71e-28 | 203 |
musculoskeletal system | 1.04e-23 | 167 |
connective tissue | 1.08e-14 | 371 |
mesoderm | 2.36e-14 | 315 |
mesoderm-derived structure | 2.36e-14 | 315 |
presumptive mesoderm | 2.36e-14 | 315 |
blood | 3.82e-08 | 15 |
haemolymphatic fluid | 3.82e-08 | 15 |
organism substance | 3.82e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.85e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.