FFCP PHASE1:Hg19::chr1:167190091..167190156,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5451|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9212|TSSclassifier=S|UniProt=P14859,B4E029,F5GZN2,B4DYN6,F5H589|association_with_transcript=0bp_to_ENST00000271411,ENST00000367865,ENST00000420254,ENST00000429375,ENST00000442313,ENST00000452019,ENST00000492850,ENST00000557909,ENST00000558944,ENST00000559038,NR_037163,uc001gec.2,uc001ged.2,uc001gee.2,uc010plg.1,uc010plh.1_5end|description=CAGE_peak_1_at_POU2F1_5end|id=chr1:167190091..167190156,+|ontology_enrichment_celltype=CL:0000037!2.51e-25!172;CL:0000566!2.51e-25!172;CL:0000738!3.78e-24!140;CL:0002032!2.95e-23!165;CL:0000837!2.95e-23!165;CL:0000988!5.39e-22!182;CL:0002031!2.00e-17!124;CL:0002087!1.99e-15!119;CL:0000763!1.67e-14!112;CL:0000049!1.67e-14!112;CL:0000766!1.05e-11!76;CL:0000860!3.00e-10!45;CL:0002057!1.70e-09!42;CL:0000557!7.41e-09!71;CL:0000839!8.79e-09!70;CL:0000838!9.27e-09!52;CL:0000542!1.30e-08!53;CL:0000051!1.30e-08!53;CL:0002009!2.51e-07!65;CL:0002194!7.94e-07!63;CL:0000576!7.94e-07!63;CL:0000040!7.94e-07!63;CL:0000559!7.94e-07!63|ontology_enrichment_celltype_v019=CL:0000860;3.64e-07;33!CL:0002057;3.64e-07;33|ontology_enrichment_celltype_v019_2=CL:0000037,6.53e-25,168;CL:0000738,8.67e-24,136;CL:0002032,7.50e-23,161;CL:0000837,7.50e-23,161;CL:0000988,3.26e-22,177;CL:0002031,4.52e-17,120;CL:0002087,4.46e-15,115;CL:0000763,3.68e-14,108;CL:0000049,3.68e-14,108;CL:0000766,2.07e-11,72;CL:0000860,1.69e-09,42;CL:0002057,1.69e-09,42;CL:0000838,9.22e-09,52;CL:0000542,1.30e-08,53;CL:0000051,1.30e-08,53;CL:0000557,1.52e-08,67;CL:0000839,1.79e-08,66;CL:0000473,3.13e-08,48;CL:0000234,3.13e-08,48;CL:0002009,5.12e-07,61|ontology_enrichment_development_v019=CL:0002057;3.41e-07;42|ontology_enrichment_disease=DOID:0050687!4.39e-07!143;DOID:305!7.83e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:0050687,4.38e-07,143;DOID:305,7.80e-07,106|ontology_enrichment_uberon=UBERON:0007023!4.59e-17!115;UBERON:0001017!6.42e-15!82;UBERON:0005743!5.46e-14!86;UBERON:0000073!1.38e-13!94;UBERON:0001016!1.38e-13!94;UBERON:0001049!1.61e-13!57;UBERON:0005068!1.61e-13!57;UBERON:0006241!1.61e-13!57;UBERON:0007135!1.61e-13!57;UBERON:0000955!1.12e-12!69;UBERON:0006238!1.12e-12!69;UBERON:0002780!2.96e-12!41;UBERON:0001890!2.96e-12!41;UBERON:0006240!2.96e-12!41;UBERON:0003080!5.57e-12!42;UBERON:0002616!7.13e-11!59;UBERON:0001893!9.50e-10!34;UBERON:0002791!1.42e-09!33;UBERON:0002020!1.95e-09!34;UBERON:0003528!1.95e-09!34;UBERON:0002346!2.25e-09!90;UBERON:0001869!6.73e-09!32;UBERON:0003075!9.37e-09!86;UBERON:0007284!9.37e-09!86;UBERON:0002619!4.32e-07!22;UBERON:0000956!4.78e-07!25;UBERON:0000203!4.78e-07!25;UBERON:0003056!6.00e-07!61;UBERON:0002390!7.90e-07!102;UBERON:0003061!7.90e-07!102|ontology_enrichment_uberon_v019=UBERON:0002780;4.62e-09;41!UBERON:0001890;4.62e-09;41!UBERON:0000073;1.08e-08;53!UBERON:0002616;1.08e-08;53!UBERON:0001893;2.52e-08;34!UBERON:0002791;3.87e-08;32!UBERON:0003528;4.88e-08;34!UBERON:0002020;4.88e-08;34!UBERON:0001869;6.92e-08;32!UBERON:0002619;5.91e-07;22!UBERON:0000956;6.67e-07;25!UBERON:0000203;6.67e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.29e-16,114;UBERON:0001017,4.46e-15,81;UBERON:0001016,1.47e-14,89;UBERON:0001049,9.94e-14,56;UBERON:0005068,9.94e-14,56;UBERON:0006241,9.94e-14,56;UBERON:0007135,9.94e-14,56;UBERON:0000073,3.86e-13,53;UBERON:0002616,3.86e-13,53;UBERON:0000955,7.82e-13,68;UBERON:0006238,7.82e-13,68;UBERON:0002780,2.94e-12,41;UBERON:0001890,2.94e-12,41;UBERON:0003080,2.94e-12,41;UBERON:0006240,2.94e-12,41;UBERON:0001893,9.45e-10,34;UBERON:0003528,1.94e-09,34;UBERON:0002020,1.94e-09,34;UBERON:0002791,3.71e-09,32;UBERON:0001869,6.70e-09,32;UBERON:0002346,1.03e-08,86;UBERON:0003075,4.18e-08,82;UBERON:0007284,4.18e-08,82;UBERON:0003056,2.94e-07,61;UBERON:0002619,4.30e-07,22;UBERON:0000956,4.77e-07,25;UBERON:0000203,4.77e-07,25;UBERON:0011216,7.64e-07,223|phase1_expression=2.54349730978779,3.63970890614671,1.40954404095971,0,0.446961094427288,0,0,0,1.30592814099919,2.7030733015166,0.697801167972428,3.71350332621293,3.16520373874144,2.22779435328084,0.994192127183747,1.34465029290355,1.80808358407193,0,0.975865597581014,2.09305798730539,0.816002764977012,3.76145665773705,9.15955158819382,7.93871665422728,9.54124060920501,18.4156307852563,18.7189343945876,16.2144209506179,21.6350352266897,20.7267874972495,10.5274963854932,0,1.8072355126695,1.47901604066715,3.71842562785448,10.5205232040692,8.22081230137572,13.8498852132969,16.8457335874919,16.058804432973,5.82180233023803,4.21061765824673,7.98484259665978,9.16008904311258,9.06902264853143,8.9756102639492,9.99444858694444,8.22335776043652,8.6717783850629,12.3707728698525,13.0641960329841,13.9524515634265,15.5135556331478,10.973239620925,20.3139729891513,12.4239944098119,9.00590295190891,10.562003768919,11.3251040177234,11.2325159476633,13.4260796417799,7.91643120448119,13.9624560335142,12.3605177654481,12.7692064996577,7.94339314567596,15.5705562248894,10.80369260604,12.5155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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5451 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9212 | |||
|TSSclassifier=S | |||
|UniProt=P14859,B4E029,F5GZN2,B4DYN6,F5H589 | |||
|association_with_transcript=0bp_to_ENST00000271411,ENST00000367865,ENST00000420254,ENST00000429375,ENST00000442313,ENST00000452019,ENST00000492850,ENST00000557909,ENST00000558944,ENST00000559038,NR_037163,uc001gec.2,uc001ged.2,uc001gee.2,uc010plg.1,uc010plh.1_5end | |||
|description=CAGE_peak_1_at_POU2F1_5end | |||
|id=chr1:167190091..167190156,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.51e-25!172;CL:0000566!2.51e-25!172;CL:0000738!3.78e-24!140;CL:0002032!2.95e-23!165;CL:0000837!2.95e-23!165;CL:0000988!5.39e-22!182;CL:0002031!2.00e-17!124;CL:0002087!1.99e-15!119;CL:0000763!1.67e-14!112;CL:0000049!1.67e-14!112;CL:0000766!1.05e-11!76;CL:0000860!3.00e-10!45;CL:0002057!1.70e-09!42;CL:0000557!7.41e-09!71;CL:0000839!8.79e-09!70;CL:0000838!9.27e-09!52;CL:0000542!1.30e-08!53;CL:0000051!1.30e-08!53;CL:0002009!2.51e-07!65;CL:0002194!7.94e-07!63;CL:0000576!7.94e-07!63;CL:0000040!7.94e-07!63;CL:0000559!7.94e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.64e-07;33!CL:0002057;3.64e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.53e-25,168;CL:0000738,8.67e-24,136;CL:0002032,7.50e-23,161;CL:0000837,7.50e-23,161;CL:0000988,3.26e-22,177;CL:0002031,4.52e-17,120;CL:0002087,4.46e-15,115;CL:0000763,3.68e-14,108;CL:0000049,3.68e-14,108;CL:0000766,2.07e-11,72;CL:0000860,1.69e-09,42;CL:0002057,1.69e-09,42;CL:0000838,9.22e-09,52;CL:0000542,1.30e-08,53;CL:0000051,1.30e-08,53;CL:0000557,1.52e-08,67;CL:0000839,1.79e-08,66;CL:0000473,3.13e-08,48;CL:0000234,3.13e-08,48;CL:0002009,5.12e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;3.41e-07;42 | |||
|ontology_enrichment_disease=DOID:0050687!4.39e-07!143;DOID:305!7.83e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.38e-07,143;DOID:305,7.80e-07,106 | |||
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| |||
|short_description=p1@POU2F1 | |||
}} |
Revision as of 01:34, 12 September 2013
Short description: | p1@POU2F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_POU2F1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000271411, ENST00000367865, ENST00000420254, ENST00000429375, ENST00000442313, ENST00000452019, ENST00000492850, ENST00000557909, ENST00000558944, ENST00000559038, NR_037163, uc001gec.2, uc001ged.2, uc001gee.2, uc010plg.1, uc010plh.1_5end |
EntrezGene: | POU2F1 |
HGNC: | 9212 |
UniProt: | P14859B4E029F5GZN2B4DYN6F5H589 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.53e-25 | 168 |
leukocyte | 8.67e-24 | 136 |
hematopoietic oligopotent progenitor cell | 7.50e-23 | 161 |
hematopoietic multipotent progenitor cell | 7.50e-23 | 161 |
hematopoietic cell | 3.26e-22 | 177 |
hematopoietic lineage restricted progenitor cell | 4.52e-17 | 120 |
nongranular leukocyte | 4.46e-15 | 115 |
myeloid cell | 3.68e-14 | 108 |
common myeloid progenitor | 3.68e-14 | 108 |
myeloid leukocyte | 2.07e-11 | 72 |
classical monocyte | 1.69e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.69e-09 | 42 |
lymphoid lineage restricted progenitor cell | 9.22e-09 | 52 |
lymphocyte | 1.30e-08 | 53 |
common lymphoid progenitor | 1.30e-08 | 53 |
granulocyte monocyte progenitor cell | 1.52e-08 | 67 |
myeloid lineage restricted progenitor cell | 1.79e-08 | 66 |
defensive cell | 3.13e-08 | 48 |
phagocyte | 3.13e-08 | 48 |
macrophage dendritic cell progenitor | 5.12e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.29e-16 | 114 |
central nervous system | 4.46e-15 | 81 |
nervous system | 1.47e-14 | 89 |
neural tube | 9.94e-14 | 56 |
neural rod | 9.94e-14 | 56 |
future spinal cord | 9.94e-14 | 56 |
neural keel | 9.94e-14 | 56 |
regional part of nervous system | 3.86e-13 | 53 |
regional part of brain | 3.86e-13 | 53 |
brain | 7.82e-13 | 68 |
future brain | 7.82e-13 | 68 |
regional part of forebrain | 2.94e-12 | 41 |
forebrain | 2.94e-12 | 41 |
anterior neural tube | 2.94e-12 | 41 |
future forebrain | 2.94e-12 | 41 |
telencephalon | 9.45e-10 | 34 |
brain grey matter | 1.94e-09 | 34 |
gray matter | 1.94e-09 | 34 |
regional part of telencephalon | 3.71e-09 | 32 |
cerebral hemisphere | 6.70e-09 | 32 |
neurectoderm | 1.03e-08 | 86 |
neural plate | 4.18e-08 | 82 |
presumptive neural plate | 4.18e-08 | 82 |
pre-chordal neural plate | 2.94e-07 | 61 |
regional part of cerebral cortex | 4.30e-07 | 22 |
cerebral cortex | 4.77e-07 | 25 |
pallium | 4.77e-07 | 25 |
organ system subdivision | 7.64e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.38e-07 | 143 |
carcinoma | 7.80e-07 | 106 |
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