FFCP PHASE1:Hg19::chr1:200379777..200379783,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1842|description=CAGE_peak_at_chr1:200379777..200379783,-|id=chr1:200379777..200379783,-|ontology_enrichment_celltype=CL:0000057!8.54e-13!75;CL:0000055!1.93e-09!180;CL:0002620!3.94e-09!23;CL:0002334!5.37e-09!12|ontology_enrichment_celltype_v019=CL:0002580;1.27e-14;3!CL:0000135;2.88e-13;3!CL:0000388;2.88e-13;3!CL:0002579;5.41e-13;3!CL:0002334;1.35e-12;12!CL:0002620;8.78e-11;23!CL:0002570;1.32e-08;8!CL:0000153;1.24e-07;9!CL:0000447;1.24e-07;9!CL:0000214;9.19e-07;3|ontology_enrichment_celltype_v019_2=CL:0002580,1.24e-14,3;CL:0000057,5.99e-14,76;CL:0000135,1.70e-13,3;CL:0000388,1.70e-13,3;CL:0002579,7.11e-13,3;CL:0002334,1.53e-12,12;CL:0002620,1.05e-10,23;CL:0002570,1.03e-08,8;CL:0000153,1.48e-07,9;CL:0000447,1.48e-07,9;CL:0000214,8.21e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0007846;2.88e-13;3!UBERON:0000043;2.88e-13;3!UBERON:0007845;2.88e-13;3!UBERON:0004457;1.47e-11;9!UBERON:0000042;1.47e-11;9!UBERON:0001013;2.22e-10;14!UBERON:0006915;9.19e-07;3!UBERON:0007616;9.19e-07;3!UBERON:0002217;9.19e-07;3!UBERON:0002018;9.19e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.70e-13,3;UBERON:0000043,1.70e-13,3;UBERON:0007845,1.70e-13,3;UBERON:0001013,1.63e-10,14;UBERON:0004457,1.40e-08,12;UBERON:0000042,1.40e-08,12;UBERON:0002384,7.71e-07,371;UBERON:0006915,8.21e-07,3;UBERON:0007616,8.21e-07,3;UBERON:0002217,8.21e-07,3;UBERON:0002018,8.21e-07,3|phase1_expression=0.726713517082227,0.856402095563933,0.281908808191942,0,0,1.74467704820074,7.59899634504932,0,0,0,0.697801167972428,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,1.30361867064741,0,0.486634870302636,0,0,0.087834785693126,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0,0.132409180813219,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0.368502951935304,0,0,0,0,0,0,0.375355559615893,0,0.438977620880838,0.30648779579902,1.05166641234618,0,0.538168907066586,0.85422955527427,2.11931901159562,0,0.206105058476878,2.31876486041066,0.558350568994769,6.58227695740938,6.04109431999431,5.04867548488229,1.38074847963449,0,2.4850671476163,0.503760491138201,1.01736355386293,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,3.80265104465493,0,1.77236972004421,0,0,0.171567810298526,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.18755765801964,24.4004537528019,6.73584226639377,2.17836553734692,1.02341449813341,1.60853921143608,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.581051892299796,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.03041011647722,0.732555718546747,1.07262349896764,0,0,0,0.676695028044854,0.154048617114644,0.767518373630648,0.137836572484531,0.107420244868274,0.435050081742686,0.0852266274161009,0.356128142586949,0,0,0.255225424989168,0,0,2.20368642781448,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,3.79993743535795,2.63435914367922,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,1.33570446027487,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0,5.50355303909173,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.801588202515337,0,0,0,0,0,0.720273989940749,0,0.235694034616795,0,0,0,0.866851769704557,0,0,0,0.859530882839914,0,0,0.458320848023367,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0.160753148465019,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1842 | |||
|description=CAGE_peak_at_chr1:200379777..200379783,- | |||
|id=chr1:200379777..200379783,- | |||
|ontology_enrichment_celltype=CL:0000057!8.54e-13!75;CL:0000055!1.93e-09!180;CL:0002620!3.94e-09!23;CL:0002334!5.37e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.27e-14;3!CL:0000135;2.88e-13;3!CL:0000388;2.88e-13;3!CL:0002579;5.41e-13;3!CL:0002334;1.35e-12;12!CL:0002620;8.78e-11;23!CL:0002570;1.32e-08;8!CL:0000153;1.24e-07;9!CL:0000447;1.24e-07;9!CL:0000214;9.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.24e-14,3;CL:0000057,5.99e-14,76;CL:0000135,1.70e-13,3;CL:0000388,1.70e-13,3;CL:0002579,7.11e-13,3;CL:0002334,1.53e-12,12;CL:0002620,1.05e-10,23;CL:0002570,1.03e-08,8;CL:0000153,1.48e-07,9;CL:0000447,1.48e-07,9;CL:0000214,8.21e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.88e-13;3!UBERON:0000043;2.88e-13;3!UBERON:0007845;2.88e-13;3!UBERON:0004457;1.47e-11;9!UBERON:0000042;1.47e-11;9!UBERON:0001013;2.22e-10;14!UBERON:0006915;9.19e-07;3!UBERON:0007616;9.19e-07;3!UBERON:0002217;9.19e-07;3!UBERON:0002018;9.19e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.70e-13,3;UBERON:0000043,1.70e-13,3;UBERON:0007845,1.70e-13,3;UBERON:0001013,1.63e-10,14;UBERON:0004457,1.40e-08,12;UBERON:0000042,1.40e-08,12;UBERON:0002384,7.71e-07,371;UBERON:0006915,8.21e-07,3;UBERON:0007616,8.21e-07,3;UBERON:0002217,8.21e-07,3;UBERON:0002018,8.21e-07,3 | |||
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|short_description=p@chr1:200379777..200379783,- | |||
}} |
Revision as of 02:40, 12 September 2013
Short description: | p@chr1:200379777..200379783, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:200379777..200379783, - |
Coexpression cluster: | C1842_Preadipocyte_epithelioid_Synoviocyte_tenocyte_renal_Fibroblast_spindle |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.24e-14 | 3 |
fibroblast | 5.99e-14 | 76 |
fibrocyte | 1.70e-13 | 3 |
tendon cell | 1.70e-13 | 3 |
omentum preadipocyte | 7.11e-13 | 3 |
preadipocyte | 1.53e-12 | 12 |
skin fibroblast | 1.05e-10 | 23 |
mesenchymal stem cell of adipose | 1.03e-08 | 8 |
GAG secreting cell | 1.48e-07 | 9 |
carbohydrate secreting cell | 1.48e-07 | 9 |
synovial cell | 8.21e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.70e-13 | 3 |
tendon | 1.70e-13 | 3 |
regular connective tissue | 1.70e-13 | 3 |
adipose tissue | 1.63e-10 | 14 |
cavity lining | 1.40e-08 | 12 |
serous membrane | 1.40e-08 | 12 |
connective tissue | 7.71e-07 | 371 |
stratified squamous epithelium | 8.21e-07 | 3 |
layer of synovial tissue | 8.21e-07 | 3 |
synovial joint | 8.21e-07 | 3 |
synovial membrane of synovial joint | 8.21e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.