FFCP PHASE1:Hg19::chr1:203153416..203153419,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C283|description=CAGE_peak_at_chr1:203153416..203153419,-|id=chr1:203153416..203153419,-|ontology_enrichment_celltype=CL:0000135!4.60e-12!3;CL:0000386!4.60e-12!3;CL:0000388!4.60e-12!3;CL:0000214!9.32e-12!3;CL:0000153!1.01e-08!9;CL:0000447!1.01e-08!9;CL:0000499!1.88e-07!27|ontology_enrichment_celltype_v019=CL:0000135;4.27e-34;3!CL:0000388;4.27e-34;3!CL:0002540;9.07e-18;6!CL:0002092;3.02e-11;10|ontology_enrichment_celltype_v019_2=CL:0000135,4.27e-34,3;CL:0000388,4.27e-34,3;CL:0002540,9.07e-18,6;CL:0002092,3.02e-11,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000043!4.60e-12!3;UBERON:0006915!9.32e-12!3;UBERON:0002018!9.32e-12!3;UBERON:0002217!9.32e-12!3;UBERON:0007616!9.32e-12!3;UBERON:0005383!1.16e-11!3;UBERON:0005382!1.16e-11!3;UBERON:0002771!2.71e-11!3;UBERON:0001874!2.55e-09!1;UBERON:0001871!2.55e-09!7;UBERON:0000369!5.74e-09!4;UBERON:0002435!5.74e-09!4;UBERON:0000204!5.74e-09!4;UBERON:0010082!5.74e-09!4;UBERON:0002420!1.61e-08!9;UBERON:0007245!1.61e-08!9;UBERON:0010009!1.61e-08!9;UBERON:0010011!1.61e-08!9;UBERON:0000454!1.61e-08!9;UBERON:0002308!1.74e-08!9;UBERON:0000125!1.74e-08!9;UBERON:0002020!1.30e-07!34;UBERON:0003528!1.30e-07!34;UBERON:0004905!2.14e-07!5;UBERON:0000982!2.14e-07!5;UBERON:0004770!2.14e-07!5|ontology_enrichment_uberon_v019=UBERON:0007846;4.27e-34;3!UBERON:0000043;4.27e-34;3!UBERON:0007845;4.27e-34;3!UBERON:0002371;1.33e-09;12!UBERON:0001474;7.60e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.27e-34,3;UBERON:0000043,4.27e-34,3;UBERON:0007845,4.27e-34,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,1.0062716070103,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,13.4030932303111,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:203153416..203153419,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_at_chr1:203153416..203153419,- | |||
|id=chr1:203153416..203153419,- | |||
|ontology_enrichment_celltype=CL:0000135!4.60e-12!3;CL:0000386!4.60e-12!3;CL:0000388!4.60e-12!3;CL:0000214!9.32e-12!3;CL:0000153!1.01e-08!9;CL:0000447!1.01e-08!9;CL:0000499!1.88e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000135;4.27e-34;3!CL:0000388;4.27e-34;3!CL:0002540;9.07e-18;6!CL:0002092;3.02e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,4.27e-34,3;CL:0000388,4.27e-34,3;CL:0002540,9.07e-18,6;CL:0002092,3.02e-11,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000043!4.60e-12!3;UBERON:0006915!9.32e-12!3;UBERON:0002018!9.32e-12!3;UBERON:0002217!9.32e-12!3;UBERON:0007616!9.32e-12!3;UBERON:0005383!1.16e-11!3;UBERON:0005382!1.16e-11!3;UBERON:0002771!2.71e-11!3;UBERON:0001874!2.55e-09!1;UBERON:0001871!2.55e-09!7;UBERON:0000369!5.74e-09!4;UBERON:0002435!5.74e-09!4;UBERON:0000204!5.74e-09!4;UBERON:0010082!5.74e-09!4;UBERON:0002420!1.61e-08!9;UBERON:0007245!1.61e-08!9;UBERON:0010009!1.61e-08!9;UBERON:0010011!1.61e-08!9;UBERON:0000454!1.61e-08!9;UBERON:0002308!1.74e-08!9;UBERON:0000125!1.74e-08!9;UBERON:0002020!1.30e-07!34;UBERON:0003528!1.30e-07!34;UBERON:0004905!2.14e-07!5;UBERON:0000982!2.14e-07!5;UBERON:0004770!2.14e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.27e-34;3!UBERON:0000043;4.27e-34;3!UBERON:0007845;4.27e-34;3!UBERON:0002371;1.33e-09;12!UBERON:0001474;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.27e-34,3;UBERON:0000043,4.27e-34,3;UBERON:0007845,4.27e-34,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,1.0062716070103,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,13.4030932303111,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:203153416..203153419,- | |||
}} |
Revision as of 02:53, 12 September 2013
Short description: | p@chr1:203153416..203153419, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:203153416..203153419, - |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 4.27e-34 | 3 |
tendon cell | 4.27e-34 | 3 |
mesenchymal stem cell of the bone marrow | 9.07e-18 | 6 |
bone marrow cell | 3.02e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.27e-34 | 3 |
tendon | 4.27e-34 | 3 |
regular connective tissue | 4.27e-34 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.